rna6191, rna6191 (mRNA) Nannochloropsis gaditana

Overview
Namerna6191
Unique Namerna6191
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length748
Alignment locationCM002467.1:806459..806929 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101686g1.9570.mrna
Orig protein idgnl|cribi|Naga_101686g1.9570
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:806459..806929 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101686g1gene5981Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24497.1cds6176Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6191rna6191-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6191 ID=rna6191|Name=rna6191|organism=Nannochloropsis gaditana|type=mRNA|length=748bp
CCCTCCCCCGGCCTCCTCGTCGGTCCCTGCCATCTTCATTGTCAATTGCC
AACTCCCCTCCGAGGCCCCCGTCCTTTTGGGCGCTAGCGACGACGGGCCC
GGCTATAACGTCATCTTTTACTTCGTCTGCACGGAGGAGGTAGGGCGGGA
GGGCGGGAGGAAGGGAAGGAGGGAGGGAGGCCTTCTGTCGCATCGACGGC
GATGAGCGCCAAGAGAGACAGACTCAATTCCCCCCCGCATTCCGCCACCT
CCCCTTTTTGCATTCTACCTCCCTTCATTGCCCACATCACATCCTTGCAA
CATGCTTCGTCCCCACCCTCCTCATAGCTTTTCCTATGTTTCCCTCCCAC
CACCGTGTCATTTGCCCTTCCCTCTCTTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCGACACAGGCCGCCCAGAGCCT
CCGCGACCTTCCGTCGGCACCTCCGGCCGTTAAGCTCCTGGAGGAGTATT
TCCGAATTGCCCCGAATAACCCCGAGTTCCGAGGAAGGTTCAAGGCCATG
GCGCAGGTGTGCCACTGCCCCCCCCTACTCCCTCTCATGTTTTCTCTTGC
TTCTTCCTTTCCCTGCCTAGGAAGTGTTTGTTTGAAAGGGAGTGATCAGA
GGTGACCTTCACGAACCCTGTGCGCTCCAAAGCAGTATACGACATGCTTG
AACTATACGGGCAACCTCCTCTCTCCTCTTGCGCGTCGATCTCCTGCT
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protein sequence of rna6191

>rna6191-protein ID=rna6191-protein|Name=rna6191|organism=Nannochloropsis gaditana|type=polypeptide|length=124bp
MEFPKSSGTSTVPAGHGPDVSGGGGTSRGAERMKGEGGRESPSPSPPTKS
PQNEAGLQEGGSERRSKTPPPGCARAVGDGSRSPLVVSNGYATVASALGG
DVGDGGEQRGGMEGQGRVRRGGRG
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mRNA from alignment at CM002467.1:806459..806929-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6191 ID=rna6191|Name=rna6191|organism=Nannochloropsis gaditana|type=mRNA|length=471bp|location=Sequence derived from alignment at CM002467.1:806459..806929- (Nannochloropsis gaditana)
CGTCCAAGGCACATCAAGTGAGTCCTTGATTTATCATCGCCGTCCAACAT
CCATCTTTACACGTGCAAACATTCAGAAGCAGCCACGAGCATTCCAAGAA
TGGAGTTTCCAAAGTCCTCTGGCACAAGTACAGTGCCCGCTGGGCACGGT
CCCGATGTTTCTGGAGGAGGCGGAACAAGCAGAGGAGCCGAGCGCATGAA
GGGGGAGGGAGGGAGGGAAAGTCCCTCCCCTTCTCCACCGACCAAATCTC
CTCAAAACGAAGCAGGGCTTCAGGAGGGAGGGAGTGAGAGGAGGAGCAAA
ACCCCTCCTCCTGGGTGTGCCCGTGCTGTTGGGGACGGGAGCAGGAGTCC
GCTTGTTGTGTCGAACGGTTATGCCACAGTCGCCTCGGCCCTCGGCGGTG
ATGTGGGGGACGGAGGAGAACAACGGGGAGGGATGGAGGGGCAGGGAAGG
GTTCGTCGGGGTGGGAGAGGA
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Coding sequence (CDS) from alignment at CM002467.1:806459..806929-

>rna6191 ID=rna6191|Name=rna6191|organism=Nannochloropsis gaditana|type=CDS|length=372bp|location=Sequence derived from alignment at CM002467.1:806459..806929- (Nannochloropsis gaditana)
ATGGAGTTTCCAAAGTCCTCTGGCACAAGTACAGTGCCCGCTGGGCACGG
TCCCGATGTTTCTGGAGGAGGCGGAACAAGCAGAGGAGCCGAGCGCATGA
AGGGGGAGGGAGGGAGGGAAAGTCCCTCCCCTTCTCCACCGACCAAATCT
CCTCAAAACGAAGCAGGGCTTCAGGAGGGAGGGAGTGAGAGGAGGAGCAA
AACCCCTCCTCCTGGGTGTGCCCGTGCTGTTGGGGACGGGAGCAGGAGTC
CGCTTGTTGTGTCGAACGGTTATGCCACAGTCGCCTCGGCCCTCGGCGGT
GATGTGGGGGACGGAGGAGAACAACGGGGAGGGATGGAGGGGCAGGGAAG
GGTTCGTCGGGGTGGGAGAGGA
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Synonyms
Publications