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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100678g4.3067.mrna |
| Orig protein id | gnl|cribi|Naga_100678g4.3067 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:769060..770995 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6172 ID=rna6172|Name=rna6172|organism=Nannochloropsis gaditana|type=mRNA|length=1134bp
CGTCGTTGTATCCTCACCGTTCCATTTATCACCCCTCTTCCCTCCCTTCC
TCTCTCCTCTCTCCCTCCTGTTGTGCCCCCCTCAGTTCATCCAGCAGATG
ACAGATCCCAACACCGTCCGCGCCATGCTTCAACTTCAACGGGCTGGGAT
CATACCCAACATGGGCCCCTCCGGCGTGCCCAGTCCTTTCCCTCCCAATG
GCCCTCCCCCAAGTCAAGGTGCGGGGCAGGGAGGCGCGGGGCAAGCCCCT
CCTCTGGATTTCTCGGCGCTTCTGAACCAGATGGGCCCCATGGGGTTGGG
CAGTGCGCCTCCCACAGGGCCACCCTCCATGCCGGTCGCCGACCCCGCCA
CCCGTTTCGCGCCACAACTGCAGCAACTCCGCGACATGGGCTTCACGGAC
GAAGCGCGCAACTTGCAGGCGTTGCAAGCCACCAACGGGAACGTGAATGC
GGCCATTGAACGCCTCTTTATGTGAGAAATACCGGACAGGGAAAAGGAAA
TCAAGGAGGGGGGGCAAATAGATACAATTGCCTCAGTCTAGACGAGGCAG
TGACGCTTTCATTGAGAGGAGGGTTGGCACCGACGGCTGGGAAGAGGTGG
TGTGCGGAGAGAAGGAAGAAAAGAGAAGTTGCGCCAACACCGATGCGGAA
CAAAGGCCCGTTCAAAGAAGCGGTTGCAAAGGAGAAGGTAGGCCGACGGA
GAAATCAGATCTTTTGAGATAAATAAAGTAGGGATCATTATTATTTTCGG
TGTGAGCTGTATTTATAAGGTAGGAAAGGGCTTTGAGGTGGAGGCAGGAA
CAGAGCTGGACCGAGAGCAAGAGGGAGGGTCTATCAAAAATGAGGATGAG
TGACCGTAGTAAGGAGAATCTCGGCGCATACAGACTTTTGACAAAAATTG
TGAAAAGTGGGTTGTTGGTAAGGGAGGAGTCGGAGCTTTCCCGCTGAGAA
AGTGACGAGGGGAGGGAAAATGAAGACGATCAATGGATGCAAATCGGTTT
TTTTTGCCGGAAATTGTTTAACTTTTGTACGAATACGAGTTATTTTTTAT
CGTAGCCACAAGCACATATAGCGACAACCTTAAAAGACGTCTGCGATAGC
AACCCTTCAAATGAAAACCCGTCACACTCGTCCC back to topprotein sequence of rna6172 >rna6172-protein ID=rna6172-protein|Name=rna6172|organism=Nannochloropsis gaditana|type=polypeptide|length=157bp
MARNYSLGVLLAVAALASPFTQAHSTLRIDEGVKQTVTSPIDALSATMPN
PVHTWEDKKTGTYYAQNQIFLKNTDATRAVCDVKFTVPVDAAAKTRVESS
YVSHVETSRSGLDGSLPEYADKIFPNETVNLGYLISGPEAKAVEMGDFKV
TSAEWCD back to topmRNA from alignment at CM002467.1:769060..770995+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6172 ID=rna6172|Name=rna6172|organism=Nannochloropsis gaditana|type=mRNA|length=1936bp|location=Sequence derived from alignment at CM002467.1:769060..770995+ (Nannochloropsis gaditana)
GCGACTTATGTATTCCGCTGCTTTCACATCATTGCCTTTGCAAGATCAGG
AGCCATTTGCTTTTCTAGATTCTACATGTCACCAGTAGAAAAGAAGGCCG
ACAACAAAAAGAGATGCCTTTTCATGCATCATTCCTGTGATACGTACTTA
GCGTAAGCGAGGACAAATAAGCATGATGAGCTGTCTCACCCTCTTACCAG
GCAAAGCTCAAGCGTCTCTGTCGTTACCTTTTcctatccctccttccatg
aCAGAGCAGACGACCAGCATCACAAAGAACTTCGTTCTAGGAAACCCATA
AAGCTCGTTCTCAGATAAAATGGCACGAAACTACAGCCTTGGTGTTCTTC
TTGCCGTTGCGGCCCTTGCTTCCCCTTTCACTCAAGCGCACTCTACCTTA
CGGATTGACGAGGGGGTGAAACAGACCGTCACCTCTCCTATAGATGCACT
TTCTGCGACGATGCCCAACCCTGTTCACACCTGGGAGGACAAAAAAACCG
GGACGTATTACGCTCAAAACCAGATTTTTCTAAAAAACACGGATGCGACG
CGGGCGGTGTGCGACGTGAAATTTACGGTGCCGGTCGATGCGGCGGCCAA
GACCCGGGTGGAGAGCTCCTATGTCTCGCACGTGGAAACGAGTCGAAGCG
GGCTGGATGGGTCCCTGCCCGAGTATGCGGACAAGTACGTCGACGGATGG
TGGAGACTAGTGGGGTGCTAGGGTTGGAGTTCTTAGGAGCCAACGTGCTG
ATACCGTGGTATGACCAAGACCAATGCGCTCACACATCTTGGaatttcct
ctcttttttccccgcgcGCAGGATTTTCCCCAACGAAACCGTCAATCTCG
GCTACCTTATATCGGGGCCCGAGGCGAAGGCAGTGGAAATGGGAGACTTC
AAAGTGACGAGCGCTGAATGGTGCGACTGAAGGGTGGCAGacaaaggggg
aaggggggaagctGGATATAATTTTTAAAATTGGACAAGGACGGGCATTG
ATCAAGAGGTTATGTGCAAAATGAATGTTTAATATGGTAGAAGACCTGCC
GCGGATGGGGGGTTGGagagggggcaagagggggtGCTGCGACGAGAAGG
GACGATTCACGCTGGGCctagggagagggagggagcataGGCCGAAGAAC
AAAAGGAAGCGAGTCGATGAGTAAGGTGTATGTATCTGTTTTGAGGACAA
GAGAAGAAGCCAAGggtgaagggaggatggagctcTGTGCGTTGTGTGTG
CGTGGTGTGTACTAAGGCTAGGCAGGTCTTCAGGCGTGACAGCAACATGG
GCTCGGGCATTGTGACACGCGCGAATGTTCATTGAATGCAGTGcttggga
tggaggacgaatAGCGGTCGGACTCAGAAGTCGCTCCAGCCACGCTTGAG
TGCCAcgcccggggcgggggggaaagataaAATCATCAACAAAAACCCTC
CCTACCCCAAAAAAGTGAGTTGATGAACACGGTCCATGCGACATTGGACG
CACTCCAtccatatttttttccccttttccctctcgtctcctgagtcctc
agcctcctcgcgCGTCTCCTCACAATGCAAAGGTCGCCAGGACAGGGTAG
TGATCGCTGAGGGTATTGTCGGCAAACACCTGGTAGTTGTAGGGCAAAGG
CGAGACAAAGTGGTCGAGGATGTGCTGCTCCTGCGGGCATGTGACCTGTA
GGGAGACAAttggcaggaggaaggagcaatgGCAGGTTAaagagagggac
ggcggggtggagggggagcgggggcgagAAAAATATCAACCTCATCTCGG
ATGGAACGGCAAAgagctccctccccattcttCCCACGCCTCCTTCGTGG
CCCCCCCTGCTCTTTTTGATCACTTACTTGGTCGACCAGGCTGCCCACGC
CCAAGACCCGCGGTCTATGCACGTTGAAGTCGCCGA back to topCoding sequence (CDS) from alignment at CM002467.1:769060..770995+ >rna6172 ID=rna6172|Name=rna6172|organism=Nannochloropsis gaditana|type=CDS|length=948bp|location=Sequence derived from alignment at CM002467.1:769060..770995+ (Nannochloropsis gaditana)
ATGGCACGAAACTACAGCCTTGGTGTTCTTCTTGCCGTTGCGGCCCTTGC
TTCCCCTTTCACTCAAGCGCACTCTACCTTACGGATTGACGAGGGGGTGA
AACAGACCGTCACCTCTCCTATAGATGCACTTTCTGCGACGATGCCCAAC
CCTGTTCACACCTGGGAGGACAAAAAAACCGGGACGTATTACGCTCAAAA
CCAGATTTTTCTAAAAAACACGGATGCGACGCGGGCGGTGTGCGACGTGA
AATTTACGGTGCCGGTCGATGCGGCGGCCAAGACCCGGGTGGAGAGCTCC
TATGTCTCGCACGTGGAAACGAGTCGAAGCGGGCTGGATGGGTCCCTGCC
CGAGTATGCGGACAAGATTTTCCCCAACGAAACCGTCAATCTCGGCTACC
TTATATCGGGGCCCGAGGCGAAGGCAGTGGAAATGGGAGACTTCAAAGTG
ACGAGCGCTGAATGGTGCGACTGAATGGCACGAAACTACAGCCTTGGTGT
TCTTCTTGCCGTTGCGGCCCTTGCTTCCCCTTTCACTCAAGCGCACTCTA
CCTTACGGATTGACGAGGGGGTGAAACAGACCGTCACCTCTCCTATAGAT
GCACTTTCTGCGACGATGCCCAACCCTGTTCACACCTGGGAGGACAAAAA
AACCGGGACGTATTACGCTCAAAACCAGATTTTTCTAAAAAACACGGATG
CGACGCGGGCGGTGTGCGACGTGAAATTTACGGTGCCGGTCGATGCGGCG
GCCAAGACCCGGGTGGAGAGCTCCTATGTCTCGCACGTGGAAACGAGTCG
AAGCGGGCTGGATGGGTCCCTGCCCGAGTATGCGGACAAGATTTTCCCCA
ACGAAACCGTCAATCTCGGCTACCTTATATCGGGGCCCGAGGCGAAGGCA
GTGGAAATGGGAGACTTCAAAGTGACGAGCGCTGAATGGTGCGACTGA back to top
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