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Properties
| Property Name | Value |
|---|
| Product | Peptidase aspartic |
| Orig transcript id | gnl|cribi|Naga_100175g6.9493.mrna |
| Orig protein id | gnl|cribi|Naga_100175g6.9493 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:726015..728946 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6154 ID=rna6154|Name=rna6154|organism=Nannochloropsis gaditana|type=mRNA|length=1080bp
ATGAAAGGGAAAGTTTCCTCTGCCTCTTCTGCCCTTGAAGCTGCCACAGC
TTTAAAAGACGGTCCTTTAGCCAGCCTTTCGACACGCCTTCTGGCCAGTG
TACAGTATGTTCTGGCGGCGAACGTGCACCCACAGAAGCGGAAGAAATTC
GAACATCTCATCACGGAGCTGGTCCACCAACGTGATGTCATCCGCAGACT
CGTCTCTTCCTCTACTGCCTCACCCGAGGCTTACGCATGGTTGCAGTATC
TCCGATATTATTGGGATCCTCCAAAGAGACTTGTACAAAACGGCGGTGAC
CATAAAGCTGCGAGCGCACAAGGAAAGGGAAATTTGCACGTCCAGATAGC
CAACGCCGATTTCGAATACGGCTTCGAGTACCTGGGGATGGCAGAGCGCT
TAGTCGAGACTCCCCTTACCCACAAGTGTTACTTGACACTCTCTCAAGCT
CTTCTTCACAAGATGGGTGGCAATCCCTTTGGACCTGCGGGCACGGGGAA
AACAGAAAGCGTCAAAGCTTTGGGCGCCGCTATCGGTAGATTTGTCCTGG
TCTTCAATTGCGATGAGCGCTTTGATTTCTCAGCCATGGGTCGTTTGCTT
GCCGGCTTGTGCCAAGTCGGAGCCTGGGGCTGTTTCGATGAGTTCAATCG
ATTGGAAGAACGGATCTTATCCGCCGTTTCCCAGCAAATTATGACCATCC
AGCGAGCATTGGCATCGGGAACATCTTCTATCGACCTTTTAAAAGGAGGG
GAAGGTGGTGGAGGGGACGCGATTTCCCTCCATCAGAATGTTGGGGTCTT
CATTACCATGAACCCTGGCTACGCGGGCCGCTCGCATTTGCCCGATAATT
TGAAAGCGCTTTTCAGGTCCATCGCCATGACTGCCCCCGACAATGGGATG
ATTGCTGAGGTCATGCTCTTCGCACAGGGACTGGAAACCGCGGAAAAGCT
TGCCAAAAAAGTAGTCATGCTATTTCAATTATGTGGCGAGCAGTTTTCCA
AACAAGTTCATTATGACTTCGGATTGAGGGCCTTGAAGACCGTCTTGGTG
AAAAGCCGGGAGGACAAGGAGGCTGGATAG back to topprotein sequence of rna6154 >rna6154-protein ID=rna6154-protein|Name=rna6154|organism=Nannochloropsis gaditana|type=polypeptide|length=511bp
MAVHPTPSCAGPHTPSPPLPPCPSTGTPSSPGLRIMASLEPSPAFRLFGN
LLLLSLLSTVAHAFLPPAPSSSSLSCTPFPAFNPQTRSQSLCPPPFPFTA
LCRSSSPSSTSPSSSSSSLEEIRKLRASVIKAELGSLGVSTAGIVDKEEL
VALLLHHRTHSPERREGTSEKRTEGQGGREAPPLYTARVKFRQKTPPSTL
PGGGQAGPGPKSYVCVDLWIKNEKYEFLIDSGATPTIITERTRSRLNVRE
LAGGQRIEGVTATGGGAAPRVMLEEVSLLSPTERGRAGEGGGMVNMDALV
MGNEGVLPPGVDGLLGVVWMRYFGLVDFDWASQSLTVYPYDVRDRTSGSG
DLGLVLETPSPSLLARGVNMRQDPMSGIYFVNLFLTPPGASPPVPAIVDL
GAGLSMVNWRAAKQAGVERESSSRVVRNAMSVWGIDGTTLPVDLCDFEAL
SLENGVTLNRKRIGVADLPAFALIGYGSKPVGVVGMDVLGGTDPNNRRIV
FDFRRSMLYMM back to topmRNA from alignment at CM002467.1:726015..728946+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6154 ID=rna6154|Name=rna6154|organism=Nannochloropsis gaditana|type=mRNA|length=2932bp|location=Sequence derived from alignment at CM002467.1:726015..728946+ (Nannochloropsis gaditana)
TCCGCCTGAACATACACAGGAAATCGGCACGTTTTCGTCTAAAGCTTCAA
TTGCAAATGGGGAAGAGAGACAAAAAACGACGCCGTGAttactcttcctc
ctcttcctcctcttcctcctcctcgtcttcctcagggggggaggaagatg
aaaaaaaTCACCGTAAAAGGAAACAAAAGcacgaaaaaaagaaacatacg
cacaagaagaagcagaaaAAAGCGATGAAAGGCAAGCGCAAGTCTAAGGA
GCCCCAAAAACCACAAACAcatgacaaggaggacgtaTCCCAGCCCGCTC
AACGCACGatggccagcacctcccttccaccaccttcacccTCAACGACT
TCCACAATTCCTACTTCTTCAGCTCCTCGCCGTGAAGCCATGGCACCTAT
GTCTTTTCAAGCCTACCAAGAGCAACAGGCCCTTGTCCGGGAGGTGTACG
ACGAGGACACTGGCCGAGTCCGCTTGGTGAGAGGGACTGGCGAGATCATT
GAACGCATTGTGAGCAGAGAAGAGCAGCGGTCGATCAATCGACAAGCAAC
TGAGGGGGATGGACGAAGTTTTCAAACTCAAGTcaggcggggatggggga
cCCGGTagcggggaaaagaaagggtaAAGAGATAGAAATTGTGCCAGAGG
AGTAGGCCCAGGAAGCAGAACGAACCGCACCGTGCACGCGGCCAAAGAGC
AAAGATAGCCTTTGAAGTGGGGGCCACGGGGCGTCACTGTttggaaagag
gaagcagtgTCGTGGCCGGACGGTGATTGTCAAGTCGGGCCGCTTGGCAT
GGTGATGCTGGCGACTCATGGCCGAGGatgacaaggggaagggaggcagg
aaggagggtactGGACGGAAGGTGTTGCAAGGGAACAGATCTAGGCCAGa
cgcgggggcaggaggggaagcaaaGGGAATGGAAAAGTAGACCTCTGTCT
CCCCCCGCCTAGGACAGGGTGGGGATAGAGcgtccctcctgtctttcttc
cctctgccccatactcccttccttcctcaggGAGGGCAATGATTGATGTG
AATGGGAACGACGGCGTCCCGGgagcccctccctgcttttgGCACGCTCA
TGCTTGTCCGAGCGTCCAACCAAGTGTCCGCAGTAAGGGATGTAATGCCT
GTTCGTTGATTGGCCTGGAAACGCTCTCCGGGAAATCGACGCCGCTCTTG
GGCTCACGTTCCAAAATCCCCCCCGCTCGATCACAGGGTCAGCCCCGGTC
CGGCCAGAAGGAGCATGGCCGTCCACCCCACGCCGTCATGTGCGGGTCCA
CAtaccccctccccgcccctccctccttgcccatcGACCGgcactccttc
ctctcccggcctccGGATCATGGCATCGCTCGAGCCCTCACCTGCCTTCC
GCCTCTTCgggaacctcctccttctctccctcctctcgaccgtcgcccac
gccttccttcccccggccccttcctcctcctccctgtcctgcactccctt
ccctgccttcaaCCCCCAAACCCGCTCCCAgtctctttgtcctcctccct
tccccttcaccGCCCTctgccgttcctcctccccgtcctccacctcccca
tcctcctcctcttcttccctcgaGGAAATCCGAAAGCTCCGAGCCTCCGT
GATCAAGGCGGAGCTCGGGAGCCTAGGTGTCAGCACGGCCGGCatcgtgg
acaaggaggagctcgttgcccttcttctccaccaccggACCCATTCGCCG
GAACGGAGAGAAGGCACGTCAGAGAAGCGGACagagggccagggaggccg
AGAAGCGCCACCACTGTACACGGCCCGGGTTAAATTTCGGCAGAAAACGC
CGCCTTCCACCTtaccgggggggggacaagcaGGGCCGGGGCCGAAAAGC
TACGTGTGTGTGGACCTGTGGATCAAGAATGAGAAATATGAGTTCTTGAT
CGATTCGGGGGCGACGCCGACCATCATCACCGAGCGGACCCGGAGCCGTT
TGAACGTCCGGGAATTGGCCGGCGGGCAACGGATAGAGGGCGTAACGGCt
accggggggggagcggcTCCGCGGGTCATGCTGGAAGAGGTCTCCCTGCT
CTCACCGAccgagcgggggagggcaggggaagggggaggtatGGTGAACA
TGGACGCGTTGGTGATGGGTAATGAGGGAGTCTTGCCTCCCGGTGTAGAC
GGGTTGTTGGGGGTGGTGTGGATGCGGTATTTTGGCCTTGTGGATTTTGA
CTGGGCGAGCCAGTCCTTGACGGTTTACCCCTACGACGTGCGGGATAGGA
CGAGTGGCAGCGGGGACTTGGGCCTCGTTTTGGAAACGCCCAGCCCCAGC
CTGCTGGCCCGAGGCGTGAACATGCGACAGGACCCCATGTCAGGCATTTA
TTTTGTGAATTTATTCCTGACGCCGCCGGGAGCCAGTCCTCCCGTGCCCG
CAATTGTGGATTTGGGCGCCGGGCTCTCGATGGTGAATTGGAGGGCGGCC
AAACAGGCCGGAGTGGAGAGAGAAAGCAGCAGTCGGGTCGTGCGAAACGC
CATGAGCGTGTGGGGTATCGATGGGACCACGTTGCCCGTCGATCTCTGTG
ATTTTGAGGCATTGTCCCTAGAAAACGGCGTGACTTTGAACAGGAAACGT
ATCGGGGTCGCGGACCTGCCTGCATTTGCTCTGATCGGGTATGGATCTAA
GCCGGTGGGAGTGGTGGGCATGGACGTTTTGGGAGGGACAGACCCGAACA
ACCGAAGGATAGTTTTCGACTTTAGGAGAAGCATGTTGTACATGATGTGA
TGGACAtaagagcaggaggaaaaaacaAAGAGTGGATCAAAATATCCATT
CATAGATCTTGCTTCAGTGTTTTTTATTTAAAATCACGGAAAGTGCTCGG
ATGTCTTTCAATTTTCCGTTTGCATTTTTGGG back to topCoding sequence (CDS) from alignment at CM002467.1:726015..728946+ >rna6154 ID=rna6154|Name=rna6154|organism=Nannochloropsis gaditana|type=CDS|length=1536bp|location=Sequence derived from alignment at CM002467.1:726015..728946+ (Nannochloropsis gaditana)
ATGGCCGTCCACCCCACGCCGTCATGTGCGGGTCCACAtaccccctcccc
gcccctccctccttgcccatcGACCGgcactccttcctctcccggcctcc
GGATCATGGCATCGCTCGAGCCCTCACCTGCCTTCCGCCTCTTCgggaac
ctcctccttctctccctcctctcgaccgtcgcccacgccttccttccccc
ggccccttcctcctcctccctgtcctgcactcccttccctgccttcaaCC
CCCAAACCCGCTCCCAgtctctttgtcctcctcccttccccttcaccGCC
CTctgccgttcctcctccccgtcctccacctccccatcctcctcctcttc
ttccctcgaGGAAATCCGAAAGCTCCGAGCCTCCGTGATCAAGGCGGAGC
TCGGGAGCCTAGGTGTCAGCACGGCCGGCatcgtggacaaggaggagctc
gttgcccttcttctccaccaccggACCCATTCGCCGGAACGGAGAGAAGG
CACGTCAGAGAAGCGGACagagggccagggaggccgAGAAGCGCCACCAC
TGTACACGGCCCGGGTTAAATTTCGGCAGAAAACGCCGCCTTCCACCTta
ccgggggggggacaagcaGGGCCGGGGCCGAAAAGCTACGTGTGTGTGGA
CCTGTGGATCAAGAATGAGAAATATGAGTTCTTGATCGATTCGGGGGCGA
CGCCGACCATCATCACCGAGCGGACCCGGAGCCGTTTGAACGTCCGGGAA
TTGGCCGGCGGGCAACGGATAGAGGGCGTAACGGCtaccggggggggagc
ggcTCCGCGGGTCATGCTGGAAGAGGTCTCCCTGCTCTCACCGAccgagc
gggggagggcaggggaagggggaggtatGGTGAACATGGACGCGTTGGTG
ATGGGTAATGAGGGAGTCTTGCCTCCCGGTGTAGACGGGTTGTTGGGGGT
GGTGTGGATGCGGTATTTTGGCCTTGTGGATTTTGACTGGGCGAGCCAGT
CCTTGACGGTTTACCCCTACGACGTGCGGGATAGGACGAGTGGCAGCGGG
GACTTGGGCCTCGTTTTGGAAACGCCCAGCCCCAGCCTGCTGGCCCGAGG
CGTGAACATGCGACAGGACCCCATGTCAGGCATTTATTTTGTGAATTTAT
TCCTGACGCCGCCGGGAGCCAGTCCTCCCGTGCCCGCAATTGTGGATTTG
GGCGCCGGGCTCTCGATGGTGAATTGGAGGGCGGCCAAACAGGCCGGAGT
GGAGAGAGAAAGCAGCAGTCGGGTCGTGCGAAACGCCATGAGCGTGTGGG
GTATCGATGGGACCACGTTGCCCGTCGATCTCTGTGATTTTGAGGCATTG
TCCCTAGAAAACGGCGTGACTTTGAACAGGAAACGTATCGGGGTCGCGGA
CCTGCCTGCATTTGCTCTGATCGGGTATGGATCTAAGCCGGTGGGAGTGG
TGGGCATGGACGTTTTGGGAGGGACAGACCCGAACAACCGAAGGATAGTT
TTCGACTTTAGGAGAAGCATGTTGTACATGATGTGA back to top
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