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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100260g3.1399.mrna |
| Orig protein id | gnl|cribi|Naga_100260g3.1399 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:695531..696877 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6146 ID=rna6146|Name=rna6146|organism=Nannochloropsis gaditana|type=mRNA|length=2356bp
CATTTCGACGCCTCTGTCTCCCTCAGGAAAGTTGCCGGGGCCATTGAAAG
CACGGCATGGCGCAGGAATACGGGCTGCAAGAGCCACGTTCACCCAGCAT
GGAACAATGCTTTGCCGAGAAGCTCCGACTCACAGTTGAGGTCGACCCAA
CCCCCCCCCCTTTGACCATCGGCTCAGAGAGCGCCTTCAGTCCCCTTCAA
TTGGAAATCCCGACGGATCATGGCAACAGCACCAGCAGTGGAGATTGTGT
AAGCGATGACACCAGCAGTGTCGGTGACGGACGGGTGTGCGAGGATTGGT
CCTCGGCCGCCTCCTCTTCGTCCTTGCGGCCCCATAGTGGACGGAAAAAA
GGTGCCAAGGATGCGAAGACGCTTTGTATATCCAAAAGTGGATCGATACA
CATCGGAGGCTTCGAAATACGAAAATCAGGCCTCTTCCAGAAAAATACGC
CGAATGACCTATACGCTAACCAATCTTCAGTGACCTCAACCCCTCCGAAG
TCGTCCGGAGGACGGGAGAAACGCACTGGTGGCACCCCTCTCTCGCTCAC
CCTCGACGAGGGATCGGTCGCTACAAACGACATGGCTTCGTGTCCTTCCA
GCGGCGGCAGCCTAGGTGCGCACGGCTGTGCCGACGAAACCCCCGGGCAG
GGCCTACACGACTGCCTGGTCCCCTTGGGAGTGTTAGGCCGTGGCGCGGG
TGGGAGCGTCTGGCAAGGCATTCACGTCCCCAGCCTGCGCCTGGTGGCCG
TCAAGACCATCCCCGTCTTTGAAGAAGGGAGGCGGCTTCAGATGGTGCAG
GAGCTCCGGTCCTTGTACTGGAATCTCGCGCCTTTCCTGCCTCCCTCCTC
CTCCCTGGCGCCCTCTCATTCCCCCCCCCGCACCATCCCGGCCTCCCCTC
CCCCGTTTCCCTCCGCGGCAGACGGCCCGGGACCGATCGGTGGGACGGGC
GGGCGTGGAGGACAAGGGCTTGTCGGCGAACCATCCGGACAGGTCCTGAT
TGGCACAGGAGCACACCGCGGAAGTCCCGTGGGGGGTATGGACGCAGGCG
CTTCCCGAGGGGGAGGAGGTTGCCCCCAGCTTGTCTCCTTCTACGACGCC
TACGCGAATCCGCGGGAAGGCACCGTGAGCATAGTCCAAGAATTCATGGA
CGCAGGCTCGCTCCAAGACGTGGTCGACGCCGGGGGCTGTGCGGACGAGG
CCGTCCTGGCCCACATGGCCCGCGAAGTCTTGCTAGGCCTGGCGTACCTG
CACGCACGCCGGCAAATCCACCGGGACATTAAACCCGCCAACCTCCTCCT
GAATCACCGGGGCGAGGTAAAAATCAGCGATTTTGGGCTGGTCCGGCACT
TCGATGCCAGTATCTCCCGGGCGGATACTTTTGTCGGGACCTTCACTTAC
ATGTCGCCGGAGCGAATTTGTGGTGGGGAGTACGGGTATTCCGCGGATAT
TTGGGGGGTGGGTCTGACGCTCGTGACGTGTGCTCTGGGACGATTGCCTT
ACGAAGACGCAGGAGGCTACTGGGAGCTTGTCTCCGCGCTCAAGGAAAGG
GAACCACCGTCCCTCCCGCGCTCGGAATTTTCCTCGGAGTTTCGGGATTT
CGTTCGGCAATGTTTGAACAAAGAGCCGAGCAAACGGCCTACGGCCCGTT
ACCTGTTGGACCGTCATCCCTTCTTGCGACAAACAAGAAGGGCCGTGGGC
CAGAAGTCACCGACCGTGTCAGCTGCTGCTCCCGAGATTGGGGATACCAA
GCACGTTGAGAGAAAAGGACTCGGGAGAGTGGAATGGGAGGAAGAGGAGG
CGGGGGAGGATGTGGGAGCTGGATCGACGAGCGCGCGGAGGGAACTGTCG
GACATCCTGGAAGCGGTTAAATCCTATTATCGGCGCCTGTGGCAAGACAT
GGGCCTCCATGGCAGCAGCAACACCCACAGCAGCAACAGTCAGGGCGGCG
ATGACCCGGACGTAAAGAAAGGGGGAGCACTCATGTTGCCCAACGCGCAA
ATGGAGGCATTGAAGGGGCTGGCAGGACAACTGGGTCTTCCCTTAAGGGT
GGTTCGCGCCGCTTTTCGGCAGATGTTGCATGAGATGATCAAGGAGCAGT
GCATGGAGGCCGGGGCGGAGGAAGGGGAGGAAGACGGGCAGGCATGGGGG
CGGGAGTAGGCGGACGAGAGAGAACGGGCGTCCGAAGGCGTGTGGGAGAC
GAGGTCATTGCACATTTGTATAAAGGTATCCCCAAAATGCGTCTTTACAA
AAATTGAACGCGCGCTGTGTGCCGAAGTGGCCAGGCGGAAATGTAAATGG
GCCGCCAAACCCCGCCCGTACACATGGCGAAAGAAAATTTTGACAACACG
TACAGA back to topprotein sequence of rna6146 >rna6146-protein ID=rna6146-protein|Name=rna6146|organism=Nannochloropsis gaditana|type=polypeptide|length=158bp
MGGDGALDPAHTATLSPERVLAAYDASGDYLEAQEKLRVYLKRAFLLVSR
ARMRPTSGGVLESSFIREDIGAARRVHGERLVFAKCGSHPSDVGGVDPPP
TRMEDLLVILAGALPSPEVREAQKDFVKALDCVMDLAVAAKAIWRTQTCD
TDEKHDDV back to topmRNA from alignment at CM002467.1:695531..696877+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6146 ID=rna6146|Name=rna6146|organism=Nannochloropsis gaditana|type=mRNA|length=1347bp|location=Sequence derived from alignment at CM002467.1:695531..696877+ (Nannochloropsis gaditana)
CGGCGATACCCTGACGTGCCTATACCTCCCTCTGAAACACGCATCTCCAG
TGTTCGAGTGAGAGGGGCTCGAACAGGCTTGACTGGTGTAAAGGTGATGA
CTCCAGTGCAGTGCGTGTGAGTCGATACATCAGGCATCGGACAAGGGGCA
ATGCCGATCGTGACGGGATCGGAGCCAGCTACTAAGAGGAGCTGCCAGTC
GTCCTACAGAAACTCCCAATGCTCAGTATTGGCGCAATGTGCATctaatc
ctcctcctttgtttcATGACCTTCCTAGATCTCCTCATCAGAAATCTTCT
GCCACTGATTCCACTGTCAGATCTCTAGGGCCTAGAGAGAGCAGGACCAA
AGCTACTTGtgcgtgggagaggacggtAGGCCCCAAGCTAGGATAAAATC
TTATCTAATTCTGTGCATCATGGGGGGAGATGGCGCTCTTGACCCTGCAC
ACACCGCAACGCTTTCTCCTGAGAGGGTTCTGGCCGCTTATGACGCGTCT
GGGGATTATCTTGAGGCCCAAGAAAAGCTCAGAGTCTACTTGAAgcgagc
cttcctccttgtgtCCCGGGCTAGAATGCGTCCCACTTCAGGTGGCGTAT
TGGAAAGTAGTTTCATTCGAGAGGATATCGGGGCTGCACGACGTGTGCAT
GGAGAACGGCTTGTCTTCGCGAAGTGTGGGTCGCACCCGAGCGATGTGGG
CGGTGTGGACCCCCCACCAACGAGGATGGAAGATCTCCTCGTGATATTAG
CCGGTGCACTTCCGTCCCCAGAGGTCCGAGAAGCACAGAAAGACTTTGTA
AAGGCGTTGGACTGTGTCATGGATTTGGCCGTCGCGGCGAAGGCGATCTG
GAGGACGCAAACGTGCGACACAGATGAGAAGCACGACGATGTATAGCGTA
AAATAATCACCCAACGCAAGTCAAGTAGAGCGTCACGCGCCTTCACGTGG
GCGGGGCCCTTACATTACGTCAATGCATTCCGTGTTTACTATCAAAACCG
CCCCGACTCGATCAATGTACACGTATCAACACAGTCTTCATGACTCTCAC
GCCCCCGGGATTGTTCCCATGGCCGTCCACTGGGCGGGAAAACAGGAGAC
GATCCCCGGGGAAGCGAGCAGGACCACACAAAGCCTCCAGCGACAGACCC
AcgcgcccccctctctctctgtaCACCacgatcctccctccttccctccc
tccctccttccctccctccctccctccgccccctcctaCGCCCGTTCCTC
GgacccttccatcccctccaccgtcagAATCGCAGCTCCACATGCAAGTT
CAAGTCGCCTGGATCTAACGGCTGTCCTGTCACCGGATGCAACGAGA back to topCoding sequence (CDS) from alignment at CM002467.1:695531..696877+ >rna6146 ID=rna6146|Name=rna6146|organism=Nannochloropsis gaditana|type=CDS|length=477bp|location=Sequence derived from alignment at CM002467.1:695531..696877+ (Nannochloropsis gaditana)
ATGGGGGGAGATGGCGCTCTTGACCCTGCACACACCGCAACGCTTTCTCC
TGAGAGGGTTCTGGCCGCTTATGACGCGTCTGGGGATTATCTTGAGGCCC
AAGAAAAGCTCAGAGTCTACTTGAAgcgagccttcctccttgtgtCCCGG
GCTAGAATGCGTCCCACTTCAGGTGGCGTATTGGAAAGTAGTTTCATTCG
AGAGGATATCGGGGCTGCACGACGTGTGCATGGAGAACGGCTTGTCTTCG
CGAAGTGTGGGTCGCACCCGAGCGATGTGGGCGGTGTGGACCCCCCACCA
ACGAGGATGGAAGATCTCCTCGTGATATTAGCCGGTGCACTTCCGTCCCC
AGAGGTCCGAGAAGCACAGAAAGACTTTGTAAAGGCGTTGGACTGTGTCA
TGGATTTGGCCGTCGCGGCGAAGGCGATCTGGAGGACGCAAACGTGCGAC
ACAGATGAGAAGCACGACGATGTATAG back to top
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