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Properties
| Property Name | Value |
|---|
| Product | lysosomal acid phosphatase |
| Orig transcript id | gnl|cribi|Naga_100260g7.1405.mrna |
| Orig protein id | gnl|cribi|Naga_100260g7.1405 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:687587..689346 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6142 ID=rna6142|Name=rna6142|organism=Nannochloropsis gaditana|type=mRNA|length=870bp
ATGGACAAGGATTACAGATCTATCCATCTTTTGGGAGAGGGTGCATTCGG
TCAAGTGTACCTCATGCGCCATGTCCCCACTCAACGTCTCGTTTGCGTGA
AAGCACTCAAGGAATGTCATGAGAATTCGATACCTTGGAAGGAAGTAAAG
ATTATGCGGAAACTTTGTCATCCGTGCATCGTCCGTTATCAGGATAGCTT
TTCACTAGCTAACATTGTCTTTATTGTCATGCAGTATGCCGATAAAGGGG
ATTTGTCATCCAAGCTTGATGCCGCACGTCGCTCTCGCCCTCGCATGCAC
TTTCCTGAATCCCAAATTTGGCAATGGTTCAGTCAGCTCTGCCTAGCTCT
TCAGTATATGCATTCACGCAAACTTATCCATCGAGACATTAAACCGCCGA
ATCTTTTCCTTCTCGGCCCTGAAGAACGCTTGGTGTTAGGAGACGTGGGC
GTTGCTAAGAAGCTGGACACAACGAAAGCTTTTGCTCATACAGGCATTGG
CACTCCATTCTACATGGCTCCTGAGATATTCGGAAACAGAGGCCACAACA
CCAAGGCTGACGTGTGGTCATTAGGAGTGCTACTTTACGAGCTGGCTTAC
TTGACCCACGCCTTTGGCGGTGCTTCAATCGACGAAATTGCAAGAAATGT
CTTGAGCGGGTGTTTTCGTCCGGTAGCACCCGAAGACACGCAAAGGTATA
GCAGTGCAGTAGGAGACTTAATAATGGAACTACTGAACGTAGACCCAACT
CGACGCCCCAGCGTAACGGAGATGCTTAGGGGGAAAAACTTTCTTGCTCG
ACGAGCGCAAGAACTGAGTAAGCAAATTCTTATACCAGCAAGCGCCCCCA
AAATTGACATCACAAGATGA back to topprotein sequence of rna6142 >rna6142-protein ID=rna6142-protein|Name=rna6142|organism=Nannochloropsis gaditana|type=polypeptide|length=440bp
MLQQLPRWTLTAAFSAAALSSFSGVPFESVQGELVLSYVVLRHGARNMLP
KTSTLQESNVFGGPNLLPEGQQQCYEVGKEFRERYLDLATCARTGTCLTP
HGTESKYGVVDSNPDLNYNNFNTLFNSSALHRTLLSASSFLSGAFGEEAC
NGEELHVLSQPPVFSTEEGQDWRIRAYTKCPTYDRDLERWFQSPEFRAKE
AESLSLRTRVQALAGPAVNVSLAEWWNVYDRFQVRQASVDRDEVPQVLDD
ETYEGMVALAMWLETAKMRSSLVQNRVGGGLLADVLGRMEQAVQHRETSF
PPHVYRLTGVAAHYNTLLGVLASLQADQVANSTLSWVREKIPALAAVLVF
ELHAVPAQGGEEYLVRLMYQDGPGEPYQGISLPCSRDGDADHACPLREFF
QLGAPQALSASEWCAACGNRDVWACQAGGRGTGKLRSRGR back to topmRNA from alignment at CM002467.1:687587..689346+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6142 ID=rna6142|Name=rna6142|organism=Nannochloropsis gaditana|type=mRNA|length=1760bp|location=Sequence derived from alignment at CM002467.1:687587..689346+ (Nannochloropsis gaditana)
AAGACAGGCTTGAGCGGCAATTACGACCTCCTGTGACGCTGCGCTTACAG
CGCTTGTGGATCCACGCCTGTGGTTTGACCTTCAAAAGACGACACATGAT
ACAACACATGTCTTCCTTGATGGTGCGTTCTTTCTCGACGTGTGAAAATG
CCAAAAGATATCTGTGTACGACATCGATCGGCCCCTGATTCTCTCGCCAA
CTTAGGTATCTTACGCTCACACACCGCCCCACCGTGACCCCAGGGCACAA
TCAAAGCTGCCACCCACATCTCTTCCACCATGCTTCAACAACTTCCTCGG
TGGACATTGACCGCCGCATTCTCCGCCGCAGCgttgtcttccttctccgg
gGTTCCCTTCGAATCTGTGCAAGGCGAGCTCGTGTTGTCGTACGTTGTCC
TGCGCCATGGTGCCCGCAATATGCTACCCAAGACAAGCACTCTTCAAGAA
TCCAATGTGTTTGGTGGCCCCAACCTCCTTCCAGAAGGTCAACAACAATG
CTATGAGGTTGGTAAGGAATTTCGGGAACGATACCTTGACCTTGCCACGT
GCGCCCGGACAGGTACCTGTCTTACCCCTCACGGCACTGAATCCAAATAC
GGCGTCGTCGACTCAAACCCTGACTTGAACTACAACAATTTCAACACCCT
GTTTAACTCGTCTGCTTTGCACCGCACGTTGTTGAGCGCCAGCAGTTTTT
TGTCAGGGGCGTTTGGAGAGGAGGCTTGCAATGGAGAAGAGCTGCACGTG
CTCTCTCAACCTCCTGTCTTTTCGACCGAAGAGGGGCAAGATTGGCGCAT
ACGCGCATACACCAAGTGCCCCACATACGACCGTGACCTGGAAAGGTGGT
TCCAAAGCCCCGAGTTTCGCGCCAAAGAAGCCGAGTCTTTGTCCTTGCGC
ACCCGGGTTCAAGCCCTGGCCGGCCCCGCCGTGAACGTCTCTTTGGCCGA
ATGGTGGAACGTCTACGATCGATTTCAGGTTCGCCAGGCGTCCGTGGACA
GGGACGAGGTCCCTCAGGTTCTGGACGACGAGACCTATGAAGGAATGGTG
GCTCTCGCCATGTGGTTGGAGACCGCCAAGATGCGTTCGTCCTTGGTGCA
GAACCGGGTCGGGGGGGGTCTCCTGGCCGACGTGCTGGGACGGATGGAAC
AGGCCGTGCAGCACCGTGAGACAAGCTTCCCGCCCCACGTCTACCGGTtg
acgggcgtggcggcCCATTACAACACCTTGCTAGgggtcctcgcctccct
ccaggcggaCCAGGTCGCGAACAGCACGCTGTCCTGGGTCCGGGAGAAAA
TCCCGGCCTTGGCAGCGGTCCTCGTCTTTGAGCTGCACGCAGTACCCgca
cagggcggggaggaataCCTGGTCCGGCTCATGTATCAGGACGGCCCCGG
CGAGCCTTACCAGggcatttccctcccctgcagCCGAGACGGTGACGCCG
ACCATGCGTGCCCGCTGCGAGAATTTTTCCAGTTGGGAGCCCCGCAAGCC
TTGAGTGCATCGGAGTGGTGTGCGGCCTGTGGGAACAGGGATGTGTGGGC
TTGTCAAGCAGGGGGCAGAGGCACGGGCAAGCTCCGaagcaggggaaggt
gaagaaggggaagggggtccGCATGTAGGCGGCAGGAGGTGAACGATTTC
AATAGCATGACACCCGTGCTCGTCAGGCACGTGCAGGACAGTGGTaagtg
aaagaaagaaaggcagggaagggaaggtctCCGAGACCCTTCAACCTGTA
GGCGACGATG back to topCoding sequence (CDS) from alignment at CM002467.1:687587..689346+ >rna6142 ID=rna6142|Name=rna6142|organism=Nannochloropsis gaditana|type=CDS|length=1323bp|location=Sequence derived from alignment at CM002467.1:687587..689346+ (Nannochloropsis gaditana)
ATGCTTCAACAACTTCCTCGGTGGACATTGACCGCCGCATTCTCCGCCGC
AGCgttgtcttccttctccgggGTTCCCTTCGAATCTGTGCAAGGCGAGC
TCGTGTTGTCGTACGTTGTCCTGCGCCATGGTGCCCGCAATATGCTACCC
AAGACAAGCACTCTTCAAGAATCCAATGTGTTTGGTGGCCCCAACCTCCT
TCCAGAAGGTCAACAACAATGCTATGAGGTTGGTAAGGAATTTCGGGAAC
GATACCTTGACCTTGCCACGTGCGCCCGGACAGGTACCTGTCTTACCCCT
CACGGCACTGAATCCAAATACGGCGTCGTCGACTCAAACCCTGACTTGAA
CTACAACAATTTCAACACCCTGTTTAACTCGTCTGCTTTGCACCGCACGT
TGTTGAGCGCCAGCAGTTTTTTGTCAGGGGCGTTTGGAGAGGAGGCTTGC
AATGGAGAAGAGCTGCACGTGCTCTCTCAACCTCCTGTCTTTTCGACCGA
AGAGGGGCAAGATTGGCGCATACGCGCATACACCAAGTGCCCCACATACG
ACCGTGACCTGGAAAGGTGGTTCCAAAGCCCCGAGTTTCGCGCCAAAGAA
GCCGAGTCTTTGTCCTTGCGCACCCGGGTTCAAGCCCTGGCCGGCCCCGC
CGTGAACGTCTCTTTGGCCGAATGGTGGAACGTCTACGATCGATTTCAGG
TTCGCCAGGCGTCCGTGGACAGGGACGAGGTCCCTCAGGTTCTGGACGAC
GAGACCTATGAAGGAATGGTGGCTCTCGCCATGTGGTTGGAGACCGCCAA
GATGCGTTCGTCCTTGGTGCAGAACCGGGTCGGGGGGGGTCTCCTGGCCG
ACGTGCTGGGACGGATGGAACAGGCCGTGCAGCACCGTGAGACAAGCTTC
CCGCCCCACGTCTACCGGTtgacgggcgtggcggcCCATTACAACACCTT
GCTAGgggtcctcgcctccctccaggcggaCCAGGTCGCGAACAGCACGC
TGTCCTGGGTCCGGGAGAAAATCCCGGCCTTGGCAGCGGTCCTCGTCTTT
GAGCTGCACGCAGTACCCgcacagggcggggaggaataCCTGGTCCGGCT
CATGTATCAGGACGGCCCCGGCGAGCCTTACCAGggcatttccctcccct
gcagCCGAGACGGTGACGCCGACCATGCGTGCCCGCTGCGAGAATTTTTC
CAGTTGGGAGCCCCGCAAGCCTTGAGTGCATCGGAGTGGTGTGCGGCCTG
TGGGAACAGGGATGTGTGGGCTTGTCAAGCAGGGGGCAGAGGCACGGGCA
AGCTCCGaagcaggggaaggtga back to top
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