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Properties
| Property Name | Value |
|---|
| Product | serine threonine-protein kinase nek1 |
| Orig transcript id | gnl|cribi|Naga_100260g8.1398.mrna |
| Orig protein id | gnl|cribi|Naga_100260g8.1398 |
| Gene | PK |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:686245..687317 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6141 ID=rna6141|Name=rna6141|organism=Nannochloropsis gaditana|type=mRNA|length=960bp
ATGCCAAGATTAGGGCGGTCAAGAATCATGCCTGGCCAGGCCCCTCTTCT
AATTGTGTCGCTGCTGGTCTGCTGTTGCACAGCTTTCCTTCTTCCCTCCC
TTCCTGCCTCATCCCCCCCTGCCTTGCAGCTTCAGCAGCATCCGCGATCA
AGCCATATCGTGCCATTGGCTCGTAAAGGTGGTGGCGGTGGAGGAGACTC
GGGGGGTGGGTACGCGGAACGACAGGAATACGCCCCTCCCACGGACCCTC
GCCTAGGTCCTCCTCCCGACCTTCCCTCCCTCCTCCTCCACAATCGCATC
GTCTACCTGGGGATGGCCCTGGTCCCCGCTGTCACGGAGCTCATCATCGC
AGAGCTGCTGTACTTGAACTATGAGAGCCAAGATAGGCCCATATACATGT
ACATCAACAGCCCCGGGATCTCCGCGCCGGACGGGCGCGCCATGGGCTTT
GACACGGAGGCCTTTGCGATCGCAGACGTCATGTCCTACATCCGAGCGCC
GATTGCCACAGTTTGCGTGGGCCAATGCTTCGGTTCGGCGGCCATGCTCT
TGGCCTGCGGGACGAAAGGCCAACGGTACTCGCTGCCCAATGGAAGCATC
ATGTTGCACCAACCCCGGTCTCTGTCAAGGGGCCAGGCCTCGGACATCGC
GATCAAGGCCCGCGAAGTCATGCGCAACCGGCGCATCAACAGCGAGATGC
TGGCCAAGGCATGCGGGAAGCCGTTGGACGTGATCATCAAGGACGCAAGT
CGCAAACGGTATTTTTCGCCCGAAGAGGCGGTGGAATACGGGCTTATCGA
CCAGGTTTTGGAGAGCACCAATGACTTGCCCATGGGCCTGATTCCCACCA
AGAACGCCGAGCCTGAGAACGACTTGAACATGGCAGACGTGCGCGGGTAC
AGCAACCCGGCGGGGTACGGGGACAGTGCGGATGGAAATTTGCCGACGAC
GCCGTTTTAG back to topprotein sequence of rna6141 >rna6141-protein ID=rna6141-protein|Name=rna6141|organism=Nannochloropsis gaditana|type=polypeptide|length=289bp
MDKDYRSIHLLGEGAFGQVYLMRHVPTQRLVCVKALKECHENSIPWKEVK
IMRKLCHPCIVRYQDSFSLANIVFIVMQYADKGDLSSKLDAARRSRPRMH
FPESQIWQWFSQLCLALQYMHSRKLIHRDIKPPNLFLLGPEERLVLGDVG
VAKKLDTTKAFAHTGIGTPFYMAPEIFGNRGHNTKADVWSLGVLLYELAY
LTHAFGGASIDEIARNVLSGCFRPVAPEDTQRYSSAVGDLIMELLNVDPT
RRPSVTEMLRGKNFLARRAQELSKQILIPASAPKIDITR back to topmRNA from alignment at CM002467.1:686245..687317- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6141 ID=rna6141|Name=rna6141|organism=Nannochloropsis gaditana|type=mRNA|length=1073bp|location=Sequence derived from alignment at CM002467.1:686245..687317- (Nannochloropsis gaditana)
ATGGACAAGGATTACAGATCTATCCATCTTTTGGGAGAGGGTGCATTCGG
TCAAGTGTACCTCATGCGCCATGTCCCCACTCAACGTCTCGTTTGCGTGA
AAGCACTCAAGGAATGTCATGAGAATTCGATACCTTGGAAGGAAGTAAAG
ATTATGCGGAAACTTTGTCATCCGTGCATCGTCCGTTATCAGGATAGCTT
TTCACTAGCTAACATTGTCTTTATTGTCATGCAGTATGCCGATAAAGGGG
ATTTGTCATCCAAGCTTGATGCCGCACGTCGCTCTCGCCCTCGCATGCAC
TTTCCTGAATCCCAAATTTGGCAATGGTTCAGTCAGCTCTGCCTAGCTCT
TCAGTATATGCATTCACGCAAACTTATCCATCGAGACATTAAACCGCCGA
ATCTTTTCCTTCTCGGCCCTGAAGAACGCTTGGTGTTAGGAGACGTGGGC
GTTGCTAAGAAGCTGGACACAACGAAAGCTTTTGCTCATACAGGCATTGG
CACTCCATTCTACATGGCTCCTGAGATATTCGGAAACAGAGGCCACAACA
CCAAGGCTGACGTGTGGTCATTAGGAGTGCTACTTTACGAGCTGGCTTAC
TTGACCCACGCCTTTGGCGGTGCTTCAATCGACGAAATTGCAAGAAATGT
CTTGAGCGGGTGTTTTCGTCCGGTAGCACCCGAAGACACGCAAAGGTATA
GCAGTGCAGTAGGAGACTTAATAATGGAACTACTGAACGTAGACCCAACT
CGACGCCCCAGCGTAACGGAGATGCTTAGGGGGAAAAACTTTCTTGCTCG
ACGAGCGCAAGAACTGAGTAAGCAAATTCTTATACCAGGTAACCCTGCCA
TGCTTGGACGCAACCCAAATAGCGACGTAAGCATCGAGCAGCAAGATGCT
TTGCACGAGCAAATTCAGACATTATGGCCCGAAGTGCCACCGGGCCCCTC
TGAAAGCGCTTGCCCTCTGTCTTCTTTGCTTGAGCCCTCTACTCTTTCCC
CTTTGACACCCTCACGCGCTCCTCTCGCGTCAGAACCGCAGCAAGCGCCC
CCAAAATTGACATCACAAGATGA back to topCoding sequence (CDS) from alignment at CM002467.1:686245..687317- >rna6141 ID=rna6141|Name=rna6141|organism=Nannochloropsis gaditana|type=CDS|length=1740bp|location=Sequence derived from alignment at CM002467.1:686245..687317- (Nannochloropsis gaditana)
CAAGCGCCCCCAAAATTGACATCACAAGATGAATGGACAAGGATTACAGA
TCTATCCATCTTTTGGGAGAGGGTGCATTCGGTCAAGTGTACCTCATGCG
CCATGTCCCCACTCAACGTCTCGTTTGCGTGAAAGCACTCAAGGAATGTC
ATGAGAATTCGATACCTTGGAAGGAAGTAAAGATTATGCGGAAACTTTGT
CATCCGTGCATCGTCCGTTATCAGGATAGCTTTTCACTAGCTAACATTGT
CTTTATTGTCATGCAGTATGCCGATAAAGGGGATTTGTCATCCAAGCTTG
ATGCCGCACGTCGCTCTCGCCCTCGCATGCACTTTCCTGAATCCCAAATT
TGGCAATGGTTCAGTCAGCTCTGCCTAGCTCTTCAGTATATGCATTCACG
CAAACTTATCCATCGAGACATTAAACCGCCGAATCTTTTCCTTCTCGGCC
CTGAAGAACGCTTGGTGTTAGGAGACGTGGGCGTTGCTAAGAAGCTGGAC
ACAACGAAAGCTTTTGCTCATACAGGCATTGGCACTCCATTCTACATGGC
TCCTGAGATATTCGGAAACAGAGGCCACAACACCAAGGCTGACGTGTGGT
CATTAGGAGTGCTACTTTACGAGCTGGCTTACTTGACCCACGCCTTTGGC
GGTGCTTCAATCGACGAAATTGCAAGAAATGTCTTGAGCGGGTGTTTTCG
TCCGGTAGCACCCGAAGACACGCAAAGGTATAGCAGTGCAGTAGGAGACT
TAATAATGGAACTACTGAACGTAGACCCAACTCGACGCCCCAGCGTAACG
GAGATGCTTAGGGGGAAAAACTTTCTTGCTCGACGAGCGCAAGAACTGAG
TAAGCAAATTCTTATACCAGCAAGCGCCCCCAAAATTGACATCACAAGAT
GAATGGACAAGGATTACAGATCTATCCATCTTTTGGGAGAGGGTGCATTC
GGTCAAGTGTACCTCATGCGCCATGTCCCCACTCAACGTCTCGTTTGCGT
GAAAGCACTCAAGGAATGTCATGAGAATTCGATACCTTGGAAGGAAGTAA
AGATTATGCGGAAACTTTGTCATCCGTGCATCGTCCGTTATCAGGATAGC
TTTTCACTAGCTAACATTGTCTTTATTGTCATGCAGTATGCCGATAAAGG
GGATTTGTCATCCAAGCTTGATGCCGCACGTCGCTCTCGCCCTCGCATGC
ACTTTCCTGAATCCCAAATTTGGCAATGGTTCAGTCAGCTCTGCCTAGCT
CTTCAGTATATGCATTCACGCAAACTTATCCATCGAGACATTAAACCGCC
GAATCTTTTCCTTCTCGGCCCTGAAGAACGCTTGGTGTTAGGAGACGTGG
GCGTTGCTAAGAAGCTGGACACAACGAAAGCTTTTGCTCATACAGGCATT
GGCACTCCATTCTACATGGCTCCTGAGATATTCGGAAACAGAGGCCACAA
CACCAAGGCTGACGTGTGGTCATTAGGAGTGCTACTTTACGAGCTGGCTT
ACTTGACCCACGCCTTTGGCGGTGCTTCAATCGACGAAATTGCAAGAAAT
GTCTTGAGCGGGTGTTTTCGTCCGGTAGCACCCGAAGACACGCAAAGGTA
TAGCAGTGCAGTAGGAGACTTAATAATGGAACTACTGAACGTAGACCCAA
CTCGACGCCCCAGCGTAACGGAGATGCTTAGGGGGAAAAACTTTCTTGCT
CGACGAGCGCAAGAACTGAGTAAGCAAATTCTTATACCAG back to top
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