rna6138, rna6138 (mRNA) Nannochloropsis gaditana

Overview
Namerna6138
Unique Namerna6138
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length949
Alignment locationCM002467.1:671802..672731 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100613g1.4709.mrna
Orig protein idgnl|cribi|Naga_100613g1.4709
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:671802..672731 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100613g1gene5929Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24550.1cds6123Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6138rna6138-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6138 ID=rna6138|Name=rna6138|organism=Nannochloropsis gaditana|type=mRNA|length=949bp
CTCAGACATGCTGATTCGGCTGGGGAAGCGGCATCACGACCTCGGAGTGC
GGCCACAGCAGTATGTAAGCATGCAGCGCTCGATCCTGGTCTCTTTGGAA
GAGCTCTTGGGGGCGGAATGGAACAGGGACTACCGCGATGCCTGGGCCTC
GGTCTTTTCCTTCATATCGCATGTCATGATCAAAGCGGCGGCGGAGGAGG
CGCAGCGGGTGGCGCGGGAAGGGAAGCAAGAGGGGGGAAAGGGAAGGGGT
GAGGGGGGCGAGGGGGGCGGGGAGGCGTCGCACGGAGAGGGAAGAGGGAA
GGGTTGTCCGATCACTGCCCCGGCCCATATGCCTGTAAACAAGGTGTTGA
GCGGTTTGCAGCTCGAATCGATCCATACCTCCCATCCCGACGGTCACTAT
TTGCATCGGACACCGGCGAAGAAAGGGTGAGGGGGAGGGAGGCCGGCGGA
GGGGGGGTGGGAGACGAAGGAAGGAGGGCGACCGAAGGCGGAGTCAGGGC
GTCGGTGTATGTATTGTAATGTTTCCAGAGTGCTGCATGGTATTGTGCAT
GGAGCGGGGGGGAGAAATTAGCAAAGAAGCGGTCTTTTTCGTGAGGCTGG
GTAGAAGAGATGCCAAGGCGGGGAGGAGGAGAAGGAAGGGAGGGAGGCAA
GCGTTGCGAGAGACTCGGAATCTTATCGCCGCATGATAGCGGGAGGCGCG
CAAGCGGGGTGCGTCTTCCATCATACTCCGAGCAACCCAAGCCCCGGGCC
GCTCTGGCACTGGGATGGTGAGACTTCTTGCTGCCTGCTATCTTTCAACC
CGAATTCCTACACAAGAAACACGAAACCATCTTGAACCTATTCCTGCCAT
TGCTTCCTGATTCATCATCACATTATTTCCATGCCCCTCTCGCACCACGC
CTTGGCTTCCCTCAGAGCTGCGCACGCCCTAAGGACTTTCGAACTGCTT
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protein sequence of rna6138

>rna6138-protein ID=rna6138-protein|Name=rna6138|organism=Nannochloropsis gaditana|type=polypeptide|length=163bp
MRRGREEWRRRRRRRRRRVEREKRRRGGRKDEEEEEEEGSEEEKEEEERK
EEGKKEGGEDGEKGGCRGKQEEREKCWMLLLLALIVKDTNPGEEEEEEEE
EEEDDEDRVGERRREETETQWLRVALGWMRRMLRRKAGGGGREGGFEGHG
VNKGGWREGRGGR
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mRNA from alignment at CM002467.1:671802..672731-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6138 ID=rna6138|Name=rna6138|organism=Nannochloropsis gaditana|type=mRNA|length=930bp|location=Sequence derived from alignment at CM002467.1:671802..672731- (Nannochloropsis gaditana)
ATGAGGAGGGGGAGGGAAGAATGGAGGAGGAGGAGGAGGAGGAGGAGAAG
GAGGGTAGAGAGGGAGAAGAGGAGAAGGGGAGGAAGAAAGGACGAAGAGG
AGGAGGAGGAGGAGGGAAGTGAGGAGGAAAAGGAGGAGGAGGAAAGAAAG
GAAGAAGGGAAGAAGGAGGGGGGGGAAGATGGCGAGAAGGGAGGATGCAG
GGGCAAGCAGGAAGAAAGAGAAAAATGCTGGATGCTCCTTCTTTTGGCCT
TGATTGTGAAGGATACGAATCCAGGGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGACGACGAGGACCGAGTGGGAGAACGGAGGAGGGAGGAGAC
CGAGACACAATGGCTTCGAGTGGCCCTGGGCTGGATGAGGAGGATGCTGA
GGAGGAAAGCGGGGGGGGGGGGGAGGGAGGGAGGGTTCGAAGGGCACGGT
GTCAATAAAGGGGGCTGGCGGGAAGGGAGGGGAGGACGATGACTGTGAGG
AGGAGGCGTTCCTGCAAGAGCTGTATCACTGTACAGAGGCATGCGAGTCG
AGTGGACGATCGACGGCTGCACAGCTGACGGACGTGATAAGCGTGGCTGT
GCGGAGGTGGCTGTTGCGAGGGTTGATGGCAGGGATGGAGGGACGGGAGG
GGGGGGGGGCGTGGGTGGGCGATAAGGAGTGGGGGCGATATCGACAAGCA
GTTCGAAAGTCCTTAGGGCGTGCGCAGCTCTGAGGGAAGCCAAGGCGTGG
TGCGAGAGGGGCATGGAAATAATGTGATGATGAATCAGGAAGCAATGGCA
GGAATAGGTTCAAGATGGTTTCGTGTTTCTTGTGTAGGAATTCGGGTTGA
AAGATAGCAGGCAGCAAGAAGTCTCACCATCCCAGTGCCAGAGCGGCCCG
GGGCTTGGGTTGCTCGGAGTATGATGGAAG
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Coding sequence (CDS) from alignment at CM002467.1:671802..672731-

>rna6138 ID=rna6138|Name=rna6138|organism=Nannochloropsis gaditana|type=CDS|length=492bp|location=Sequence derived from alignment at CM002467.1:671802..672731- (Nannochloropsis gaditana)
ATGAGGAGGGGGAGGGAAGAATGGAGGAGGAGGAGGAGGAGGAGGAGAAG
GAGGGTAGAGAGGGAGAAGAGGAGAAGGGGAGGAAGAAAGGACGAAGAGG
AGGAGGAGGAGGAGGGAAGTGAGGAGGAAAAGGAGGAGGAGGAAAGAAAG
GAAGAAGGGAAGAAGGAGGGGGGGGAAGATGGCGAGAAGGGAGGATGCAG
GGGCAAGCAGGAAGAAAGAGAAAAATGCTGGATGCTCCTTCTTTTGGCCT
TGATTGTGAAGGATACGAATCCAGGGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGACGACGAGGACCGAGTGGGAGAACGGAGGAGGGAGGAGAC
CGAGACACAATGGCTTCGAGTGGCCCTGGGCTGGATGAGGAGGATGCTGA
GGAGGAAAGCGGGGGGGGGGGGGAGGGAGGGAGGGTTCGAAGGGCACGGT
GTCAATAAAGGGGGCTGGCGGGAAGGGAGGGGAGGACGATGA
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Synonyms
Publications