rna6134, rna6134 (mRNA) Nannochloropsis gaditana

Overview
Namerna6134
Unique Namerna6134
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1690
Alignment locationCM002467.1:664083..664698 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100548g4.7179.mrna
Orig protein idgnl|cribi|Naga_100548g4.7179
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:664083..664698 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100548g4gene5925Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6134rna6134-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24552.1cds6119Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6134 ID=rna6134|Name=rna6134|organism=Nannochloropsis gaditana|type=mRNA|length=1690bp
CAAGTCGGCCAGCACAAATTCCTTGTGCAGCTTGTCGAAGTACCGCTTTG
CCATGCGCGCACCCCATGTACTGACATCGTCGTCCTCGCCCTTCCTCCAC
GCAAATCGAAAATGTCGTTTCAGAACGTCGTAGTCCGTCACTATTGGAGG
CCGTGGCTTCATTGCTGAGCTTCCATGGCCGGCCAGTCGGAGGAGCGCTT
GATGATCTTCCAAATTCATCCAATCCACCAGGTAATCGGAGCCGACGCGA
AAGGAGGAAAAAGGAAAAGGTTGCCCTGGGAGGGAAACATAAGCAAACCA
GGAGGACACGTGTCATTGCGCACCGATTTATGAAGGCATTCATGTGACAT
GACTAAATCGCATTCCATCAAGAAATACCAAGTGTGTCATGGGTTTGTCT
TGCTGTGCGACTGGTTGGCAAGCCACAGACAGGTAAAGCTACCTGCCCAG
CGTTACTACAACCTCAACTACACGCAGAAAGCTAACACTGCCAAAGCCAT
CCTCGCTGCCTGCTATTTATTCACATGGCTCGCAGTGCCCAACATGTGGC
TGCAGACAATGACGGTGGTACCCTCGGCATACTGTCATCGGGATTCAGAA
TTTGTGTTTGTTCTAGCCACTTTTGGTGCGTTAACGGCCGCAGAAAAGAG
GAATCCTATAACATGCACTCATGTCGGCCCACCTTTTGACGCTTCTGTAC
CCACCCCAGGGTCTGTACAGATGCCCATCGCACAGGTCCCTGTCCCGTCG
GGATGGCAACAAGCTCAAGTGTTGGTTCCATCGACCGGGAGCAGCTTTTG
TGTCAGCTATGCCGGTGGCAACCTCCTCTCCTCCACTGCTTCCGGGACGC
ACAAGAAGCAGGAGACGGCTGAGGGCCGTCGTCCATCCGGTGAACACACG
GACGGGGACCTCGACGATGATTCGGACGCGGACGCGACTGGAGAAGAAAC
GGTGTTGGTATTTCTCCATGGGGCAGGTCATACATCCATGAGCTGGACGT
TGCCGTGCCTAGAGTTAGGGAAATTACTCGGCAGCGCCGCGTCGGAAACC
TTGATGCTGGCCCCGGACTTGCCGTTCCATGGACAGACAAGAGTCATTCC
GGACGACGGAGACATGTCGATGGCGCGGTTGGTGAAGGAGCTCCTGGGAT
GTTTACAGGCCTGGTTTGACCTCGGAGGAAGAGGAAGGGCAGGCGATGCA
GGAGTAGGTAGAAAACCACGCAACATGGTCTTTGTGGGGCACAGCTTGGG
GGGGGCATGCGCCATTCATTTGGCGCGGGACCCTGGCTTGGCGAGCATAG
GCAGGGTGCGAGGACTTTGCGTAGTGGACATGGTGGAGGGGGCCGCCATG
CAGTCGTTGGGGCACATGCACGAGCGGGTGCAGAAGGTCCCCGCACGTTT
CGACTCGATCGAGGCAGCGATTGAGTGGTCTGTAGGCGCGGGGCAAATGA
TACGAAACGAGGAGTCCGCGGCCGTGTCTGTGCCGGCCCAGCTGCGGAAG
GTAACGGGCGGCAGGCGGAGAGAAGAGGGGCGAGGAGGGGAGGGAGGGAG
GGAGGGAGGGGGGGAGGGAGGGAAGGATTTTCAGGTGGCCGGGATGGGGG
AAGACAAGGGGAGACCACTGGATGAAGGGGAAGGGGAGGTGGAGGAGTAC
TACGAGTGGATTACCGACCTGCGGGAAAGCGAGCGGTATT
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protein sequence of rna6134

>rna6134-protein ID=rna6134-protein|Name=rna6134|organism=Nannochloropsis gaditana|type=polypeptide|length=148bp
MAPASFSPQHTKGRKKRKRDAANSSSYSHTNGRNAIGGVRSITSAHRKRP
VCVTRDIFTQLLAPLSPAAFVRDHYDQKIPLVVKGHDFTTLCEQGLESGD
IRALLEATPSENISVWTVSGPSQRINTARVQDAGSAMALYEAGHSVRI
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mRNA from alignment at CM002467.1:664083..664698-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6134 ID=rna6134|Name=rna6134|organism=Nannochloropsis gaditana|type=mRNA|length=616bp|location=Sequence derived from alignment at CM002467.1:664083..664698- (Nannochloropsis gaditana)
ATGGCACCTGCCTCTTTTTCCCCGCAGCACACCAAGGGACGCAAAAAAAG
AAAACGCGACGCGGCCAATTCATCCTCTTACTCACATACAAACGGTCGCA
ATGCCATTGGTGGGGTCCGCTCGATCACATCCGCTCATCGGAAACGCCCT
GTCTGCGTGACGCGGGACATCTTCACCCAGCTCTTAGCTCCCCTCTCCCC
CGCCGCCTTCGTGCGTGATCACTACGACCAAAAGATTCCATTAGTGGTAA
AAGGTCATGATTTTACAACCTTGTGCGAGCAAGGCCTTGAAAGTGGAGAC
ATTCGTGCCCTGTTGGAAGCTACGCCGAGTGAAAACATCAGCGTCTGGAC
CGTCTCTGGCCCCTCCCAACGCATCAACACCGCGCGAGTCCAAGACGCAG
GCAGCGCCATGGCCCTGTACGAAGCCGGACATAGCGTGTATTGCCGAGCA
CCAGAAGAATTGGAGGGCGTTCTGGTAGACTCGACCATTGCGGCCTTGGG
GCTAGGGGGTGGGAAGGAGACAGGCGTGAAGCAAGTGATCGAGGGGGAGG
TGGAGCTCTTCTTGAGCCAAGCGGGCCACCGCACCCCTTTCCATTTCGAT
TTCCAGGAGAATATAA
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Coding sequence (CDS) from alignment at CM002467.1:664083..664698-

>rna6134 ID=rna6134|Name=rna6134|organism=Nannochloropsis gaditana|type=CDS|length=894bp|location=Sequence derived from alignment at CM002467.1:664083..664698- (Nannochloropsis gaditana)
GAGAATATAAATGGCACCTGCCTCTTTTTCCCCGCAGCACACCAAGGGAC
GCAAAAAAAGAAAACGCGACGCGGCCAATTCATCCTCTTACTCACATACA
AACGGTCGCAATGCCATTGGTGGGGTCCGCTCGATCACATCCGCTCATCG
GAAACGCCCTGTCTGCGTGACGCGGGACATCTTCACCCAGCTCTTAGCTC
CCCTCTCCCCCGCCGCCTTCGTGCGTGATCACTACGACCAAAAGATTCCA
TTAGTGGTAAAAGGTCATGATTTTACAACCTTGTGCGAGCAAGGCCTTGA
AAGTGGAGACATTCGTGCCCTGTTGGAAGCTACGCCGAGTGAAAACATCA
GCGTCTGGACCGTCTCTGGCCCCTCCCAACGCATCAACACCGCGCGAGTC
CAAGACGCAGGCAGCGCCATGGCCCTGTACGAAGCCGGACATAGCGTGAG
AATATAAATGGCACCTGCCTCTTTTTCCCCGCAGCACACCAAGGGACGCA
AAAAAAGAAAACGCGACGCGGCCAATTCATCCTCTTACTCACATACAAAC
GGTCGCAATGCCATTGGTGGGGTCCGCTCGATCACATCCGCTCATCGGAA
ACGCCCTGTCTGCGTGACGCGGGACATCTTCACCCAGCTCTTAGCTCCCC
TCTCCCCCGCCGCCTTCGTGCGTGATCACTACGACCAAAAGATTCCATTA
GTGGTAAAAGGTCATGATTTTACAACCTTGTGCGAGCAAGGCCTTGAAAG
TGGAGACATTCGTGCCCTGTTGGAAGCTACGCCGAGTGAAAACATCAGCG
TCTGGACCGTCTCTGGCCCCTCCCAACGCATCAACACCGCGCGAGTCCAA
GACGCAGGCAGCGCCATGGCCCTGTACGAAGCCGGACATAGCGT
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Synonyms
Publications