rna6132, rna6132 (mRNA) Nannochloropsis gaditana

Overview
Namerna6132
Unique Namerna6132
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2812
Alignment locationCM002467.1:659359..660932 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100140g2.4482.mrna
Orig protein idgnl|cribi|Naga_100140g2.4482
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:659359..660932 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100140g2gene5923Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24558.1cds6117Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6132rna6132-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6132 ID=rna6132|Name=rna6132|organism=Nannochloropsis gaditana|type=mRNA|length=2812bp
CTCCACAGGACAATTTCAGCCCGGAGGATGTTTGCCAATCTCTTTGGTGG
CTCTAGGAAGGGCATTTTGGACACAGAGGGCTGGCGCCGGAAACGAAATT
ATGACGAGATTGAAAAAGTATTTGAGAGCGACCAAGAGGAACAGGATCAC
GAAGAAGAACGAGAACCTACCTGGACGGACGACGTGAGAGGTGCCCGCAG
GAAGGCAGGGCGGATGGACCTGATCGACGTCTGGAGCACATTGGAGGAAC
CGAGAGAGTGTGAGGTGCTGGGAGGAAACGAGGGAAAGAAAGGAGAGAAG
GGCAAGGAAGTCAGGAGCGAGATGGTGGAGGTGGTGGTGGAGGCGAAGGA
CATGGGTCTGGGCATGTTGGGGATGATGACGGCCGTTGAGAAGGACACCG
CGGGCGCTCGCCGCGAGGAGGAAGACGTGGAGGAGGAGCCAGGGGAGGAC
GTGAGTGAAGATGCTCTCCTGGAAACGCTCCTCCGGGCGGTAAAGGTGGC
CAAAGAAAGCCGAGAGCGCCCTGCGGGCGGCGTCGATATCTCGATTGCGA
TGGAGGAGAAGGAAGAGGAAGGGGAGGAAAAGTCCCTTGACTTGCTTGGG
CACCAAACCCAATTTTTCCAGCCCACTCAGAAGGAGGCTGCGAGACGAGC
TTCTCCTGTCCAAGACTTGTTGCGTGGTTTTCGCGGGGTTTTAGGGGGCC
GGCGCTCAGCCCCCTCTTCCGCCCCGCTACCGTGTTTTCGGGAGTTGATT
GAGGCGCTGAGCACGACCCAGGCGGATCGCTTGGAAGACTCCGCACGGCA
AATCGCCCACGAGTTAAGGAAGGTGCAAGAATCCCTCCGGATCCGGTTGC
CGTATCAGCCTGGTGCCTTGCGACGGGCGTCGGAGGAGCAACGTCGAGAG
ATGCAGGCACAGGAGGAACGGAGAAGCGAGGGGGTGGGGTCGGCCTCGAA
GGGATGGAAGACCGGGGCGCGACGGGGGGGACGCCCAGGCCGGACGAGGC
CTTTGAGGCTGAAATGAGGCGGGGAAATCAATCGGTGGACCAGCTGCTGG
CCTTGAGTGACGCCACGGGGCAACTCAAGGCATACGCCCACGAGTACGTG
AACCGAAACGAGGCCATGCTCGCGGAGAAAGACGCCTGGATACAAACATG
GCGGGCTAAGCTGGAAACTCAGGACACGGAGGTGCGGCGTAACAAAGAGG
AGCTGCACGTGATGGACCGGCAGGTGGAGGAGCTTGTCCGCCAGCAGGCC
GGTGCGCCCTCGGGCCCTGCCTCGCCCCCGCTCTCCCCCCCGTCCTCCCT
CGCCCTGGTCACGAGCCTTCTCGACCTCGTCCGCGCCTCCTCGGGCCACG
ACATGGTCCAAGCCCGTTCCGCGCAAGCCGAGCAGCTCGAAAGCATGGAA
AGGAAACGTCAGCGGGTGGCGACCAATCTACGCTTGGTAGAGAGCTTCGT
GGCCCTGTCGCGGGCCTTGATTGAGCAGGGCAAGGCGCGGGTCTCCGCCC
AGGTGGTGGGGATCGAGCAGGAAATCGCCGAGGTCCAGGCCAAGCTGCAG
GAGAATTTGAGGACGGAAGTGGTGGGGGCAGCGGCACGGTTGCAGCAAGT
GCTGGAATTTTACGAAACCCGAAAAGAGCGGGCAGGGAAAAGCGCCAAAT
TCCGCGAGCACGAATTGCGGCAGCATACGTCGTTGTTCGGTCAAGACACC
CCCACGGAAACATTGCGCTTGGAGGCGTGCGTAAAGGAGCTGAGGCGCGT
CGTCGAGCACTCCAGCCTGGCGATCGAGCAGGCTATGCACAGGTAATTCC
TTCTACCCCCCTGCTATGCCTGTAACTCCCCCATTTTGTATTCCCTGTCA
TGCCCTCGTTGGAGCTGACGAAGCCCAGGCAAGCCCCACGATCCTGACGA
ATGCCCCGCCTTCTCCTTCCCCCTCCAAACCCTCAAGGAACCAAGTCTTT
TGGTCGCGCGTGGAGAAGGCGCTCCCCGAGCCCGTGGCGCGCGCCCTGGG
GTGTGTTTTTGAACAGCACATGACCGACCCTAGGACTGTCAATGGCGACG
CCAGCAGCCACAGCCACAGCACCGGGACCCTCCGTCGTGCTTATTCCCCG
CACACGCCGTCCTTGTCCGCCGTGGCGGCTGTGGCTGCGGCCACGACCCT
GGCAGGGAATGAGAATCCCCCAGAGGGTGGATTGCCCTCCTTCATGCGCG
AGCACAGTGGGGAGAGGGAGGGAAAAACGGCTTTGGCCAGGGTGGTGGCG
GAGGGAGCGGCGGCCTCGCAGCAGGAAGAGGAGAAGCAGGCAGCGAGCAG
GGAGCGGACGAGGAGGAAGGACGGGGAAGAGGAGGTTGTGATGGGCGTGA
CGGTGGGGGGGGGAAGGCGAAGCCCGGAGGGAGATGGGTGCGCGGTGATG
TGAAGGGAAGGGCGATGCGGTGGCGACGGGATGGGGGGAGAAATGGAAAG
AGCACCTCGCGAGACGCACGTTTGCCAAGGGGTGGTGAAGACCGATGTGT
GTGGATGGTTTTTGTGTGCAATGCACTTGTAAGAGATGAGATCGGACGAG
GGCGACTGCGACGGGGGCGGGCCTGAGGGCGGATGAAATGGATGAGGGAG
GACTCAGACATACCGCCAAGGACAATGCGCGCGCTTTACACCCTTCATAT
GGCTCGCATCAGTCAAGAGAACCGCAAGGAAAGGGGCGTGGAAGCAAAAA
AATCTGCTGTACGAACGTCAATGTAAGTGTGTAAGTTAAACATTCGAATA
TTCGACGCCCGCTTGATCCTCAATGGGAGTGCTCGAACATCACAATTGCA
TCTCGTTTCATT
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protein sequence of rna6132

>rna6132-protein ID=rna6132-protein|Name=rna6132|organism=Nannochloropsis gaditana|type=polypeptide|length=136bp
MNAFINRCAMTRVLLVCLCFPPRATFSFFLLSRRLRLPGGLDEFGRSSSA
PPTGRPWKLSNEATASNSDGLRRSETTFSICVEEGRGRRCQYMGCAHGKA
VLRQAAQGICAGRLESVEGRKSGLAVARGERGGSER
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mRNA from alignment at CM002467.1:659359..660932-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6132 ID=rna6132|Name=rna6132|organism=Nannochloropsis gaditana|type=mRNA|length=1574bp|location=Sequence derived from alignment at CM002467.1:659359..660932- (Nannochloropsis gaditana)
TGTTATAGGATTCCTCTTTTCTGCGGCCGTTAACGCACCAAAAGTGGCTA
GAACAAACACAAATTCTGAATCCCGATGACAGTATGCCGAGGGTACCACC
GTCATTGTCTGCAGCCACATGTTGGGCACTGCGAGCCATGTGAATAAATA
GCAGGCAGCGAGGATGGCTTTGGCAGTGTTAGCTTTCTGCGTGTAGTTGA
GGTTGTAGTAACGCTGGGCAGGTAGCTTTACCTGTCTGTGGCTTGCCAAC
CAGTCGCACAGCAAGACAAACCCATGACACACTTGGTATTTCTTGATGGA
ATGCGATTTAGTCATGTCACATGAATGCCTTCATAAATCGGTGCGCAATG
ACACGTGTCCTCCTGGTTTGCTTATGTTTCCCTCCCAGGGCAACCTTTTC
CTTTTTCCTCCTTTCGCGTCGGCTCCGATTACCTGGTGGATTGGATGAAT
TTGGAAGATCATCAAGCGCTCCTCCGACTGGCCGGCCATGGAAGCTCAGC
AATGAAGCCACGGCCTCCAATAGTGACGGACTACGACGTTCTGAAACGAC
ATTTTCGATTTGCGTGGAGGAAGGGCGAGGACGACGATGTCAGTACATGG
GGTGCGCGCATGGCAAAGCGGTACTTCGACAAGCTGCACAAGGAATTTGT
GCTGGCCGACTTGAGTCGGTGGAAGGAAGGAAAAGTGGGCTTGCGGTGGC
GCGTGGAGAGAGAGGTGGGTCTGAGCGGTAGGGGACAAGGGAGATGGGAG
GCTCGACTCAGGCCCGGGAGGGGCCTCGGAGAGGTGTTGAGGAGTGGCCC
ATACACTCCTTATTTTTAGCGCCAGGCGAGGGAGTGACATAAAGACACTT
CAGTCTTCAAAGAGCCGTCCCGAACCGTCTTCGTCCCTCCTCATCATCCC
GGCGGGCGTCTTCCATCCCCCTCAACCTCCCTTTAACGTCTACCCCTCCA
TTTCCATCGTCCAGGTGGTGGATGGGACTGGGCAGTACGCCTGCGGCTCG
TTAGGTCTTGGTTGCCGGGCGCGGGAAAGTTTGGCGAGCTACGAACTCAA
TTTTAGGTACCGGGAGAAAGGGGAGGTGCGGAACGAGCTGGTGAAGGTGA
GGCTGTGTCCTGACTGCAAAAACCTCTTGGATCAAGCGCGAGGGGGGAAA
GGAGGGCTGGGGGCTGGGAGGAAGGAGAGAGACAGAGGGAAAAAGAAGAG
GCGTGGAGATGTTCGGGGGAGGAGTGAGAGTCAGGAGGGGAGGGAGAGTA
AGAAAGAGAGGAGGGAGGGAGGCAGAGACAAGGAGAGGGCACCCACGATG
GAGGCGGAAGAGGGAGTCAGAACTCAAGATGTTCCCCAAGGCCTGAAGGG
GGGGGCGTCGATCCGGGAAAGCGTGGGAGCTGAGATGCTCGCGGCTGCTC
CGTCCTCCCTCGAGGCGAAGGGGAAGGCAAGCAGGGAGAAGGCGATGGCG
GAGATGGATGCATTGATAGAAGACATATTGAGAGACGGCAAAGACACGTA
ATGGGCGGAGACGAAATGTACATTTTAAAAAAATGAAACGAGATGCAATT
GTGATGTTCGAGCACTCCCATTGA
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Coding sequence (CDS) from alignment at CM002467.1:659359..660932-

>rna6132 ID=rna6132|Name=rna6132|organism=Nannochloropsis gaditana|type=CDS|length=411bp|location=Sequence derived from alignment at CM002467.1:659359..660932- (Nannochloropsis gaditana)
ATGAATGCCTTCATAAATCGGTGCGCAATGACACGTGTCCTCCTGGTTTG
CTTATGTTTCCCTCCCAGGGCAACCTTTTCCTTTTTCCTCCTTTCGCGTC
GGCTCCGATTACCTGGTGGATTGGATGAATTTGGAAGATCATCAAGCGCT
CCTCCGACTGGCCGGCCATGGAAGCTCAGCAATGAAGCCACGGCCTCCAA
TAGTGACGGACTACGACGTTCTGAAACGACATTTTCGATTTGCGTGGAGG
AAGGGCGAGGACGACGATGTCAGTACATGGGGTGCGCGCATGGCAAAGCG
GTACTTCGACAAGCTGCACAAGGAATTTGTGCTGGCCGACTTGAGTCGGT
GGAAGGAAGGAAAAGTGGGCTTGCGGTGGCGCGTGGAGAGAGAGGTGGGT
CTGAGCGGTAG
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Synonyms
Publications