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Properties
| Property Name | Value |
|---|
| Product | delta-24-sterol methyltransferase |
| Orig transcript id | gnl|cribi|Naga_100140g8.4486.mrna |
| Orig protein id | gnl|cribi|Naga_100140g8.4486 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:638249..640760 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6127 ID=rna6127|Name=rna6127|organism=Nannochloropsis gaditana|type=mRNA|length=861bp
ATGAAAACGGGAGTCTCCCGCGGTCTGAAACGTGGTAGACATATGAACCC
GTACCAGAAATCTTTTCTTCTCCTCGCCGCAGCCTTTACCGCGGGGGCTA
GCTCTGGACTCGGGAGTGCAGACTATGTCGAGAAAGGGCAGTCCAGCAAG
CTGCACGTGGTCTCACCCAAGGCACAACTTCCACACTTTCTCGTCAGGGG
TGGCTCTAGTTTCGTCCCTCCCCCTCCTTCTCAGCAATCAAGCCCTCGAG
CACCCCCGTCTCAGCGCAAGGACGACCAACAACAGCCGCAGGAGCGCCCC
CCCCAAGAGACGGCGATGTACCGGGAACAGCATGTGGTCACCCGGCCATG
GGGACCCTCGAGCACGGCTTACAGCTATCAAAGATACTATTCGGTCAACC
CTCCCTCCCCAGAAGGAGGGGCCCGGCACGAAATATTGTACCCCCGGATC
ATGCGCACGGTTGGTAACTCGGGTGTGTGCATCCTTTTCATGATCTTGAC
GGCCCGTTCTACACATTTGTACGAGCTCGCGGACCAGATATCGGGGATTT
TCAAGCGTCTCTTGGTCACGCTGCCTGTCGTGGGTCTGCTTTGTGCGAAC
TTGGCCGGCGTCCTCCTCTCCCTCATGCAATCGTTTTCGCGCAATTCTCG
GAGCAAGACCCGGCTAAAGGCCATCTTGAGCTTGAACGGCCTGGCCGAAG
TGATACAAATTGCATACAACGCCTTCCGGCTTATTCTAGGTAACGATCAA
TGGACGCCTCGGGAGGCCTACGTGGGACGGATTTTTACCAGCGTATGGAT
TCTGACCATATGCTACGCCTTCAGCACGAGTCGGTGGGATAGCTCGGGGC
AGTTTCAGTAG back to topprotein sequence of rna6127 >rna6127-protein ID=rna6127-protein|Name=rna6127|organism=Nannochloropsis gaditana|type=polypeptide|length=442bp
MCACICSSPCCHGCCMSHGTYPRTKPRPLIPTLISHRMLESINEFFKPFV
AEHSVAVAVTLSVIGLTVVVLRVRRVNLRRDGMDYKGTAADVLKIMKNSD
FEAHKDKDVHSSVSEYASLFTGARASVGRISTDASIKTRQANYQKLVTNF
YDLVTDFYEYGWGQSFHFGPRWQGESFVESIKRAEYHLCSRLGLKPGMRV
LDMGCGVGGPMRNMAIFSGAKIDGITINEYQVNIGNKYNAQRGLADQCQA
RQGDFQNLPWPADTFDAAFAVEATCHSPDKRRCFSEAFRVLKPGGLFGNY
EWIVTDKFDASNPEHTRIKEGIEVGNGLPTLATAEQVLAAVRAAGFEVLD
AYDANADVHSPHQIPWYEPLTGKLSWSGFRMTWLGRIMTHAFVTVLEAAR
IAPTGTGKISGILNATAIDLVEGGKAEIFTPSFFFVARKPDL back to topmRNA from alignment at CM002467.1:638249..640760+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6127 ID=rna6127|Name=rna6127|organism=Nannochloropsis gaditana|type=mRNA|length=2512bp|location=Sequence derived from alignment at CM002467.1:638249..640760+ (Nannochloropsis gaditana)
TGTTCTTCATGTCGCTCCCGTCGTTGGCATACCCCTCTTTATGTCCCGAA
AAATGAAAGGGTTTTCGTGGTGAATACACTATACAAACTGCTTTCTATAG
CCCCTTGTATGTGTGCTTGTATTTGCTCGTCACCCTGTTGTCATGGCTGT
TGCATGAGTCACGGTACTTATCCTCGTACCAAACCCCGCCCATTAATCCC
CACCCTCATTTCGCACAGGATGTTGGAGTCCATTAATGAGTTTTTCAAGC
CCTTTGTGGCTGAACATAGTGTCGCTGTCGCGGTACGTAATGCTCTCGtt
acttcctttttttcttttcaaatttGGGCTCCTCGAGCCGGCGAGTTTCG
AGATTCCTGCCAGACTGTTCTAAACTGAGCACGCCTAGATGGCACGTAAT
GTAATTGCTTCTTTGAAGCCAGAGGGATGTTCATGTTTTTCTGTGCAGCT
AGTGTCGCTTCGAAAGTCGAAACGTCTGAAAGAATGAGACTCAATGCCTG
CCTCTCCACCTGCAGGTAACCTTAAGCGTCATTGGCTTGACAGTGGTGGT
CCTCCGCGTCCGGCGTGTGAACCTTCGACGGGTAGGCGGGGGTCCTTAGA
TTTACCTTGAGAGTATGTTCtaaaaggagggagcaataCAGTGTTTCGCG
TGAAGTTTACCTGAAAATATCTCCTCATGTTTGCTCTTCTTAATTTGTCC
CTTAGGATGGGATGGACTACAAGGGAACGGCAGCAGACGTGCTCAAAATC
ATGAAAAATAGCGATTTTGAGGCCCACAAGGACAAGGTATGTAGAGGATT
CGTAGGGCCTGGGAATGGTGCGCGGGAAGGGCTTagcagagaaaggaggg
ggctggcTGGGAGCAAGGGCTGCCTTGAGAGAAGAGGCCATGAGCCAGTG
CCACAAATCATCGCTGCCACGCTCCATTTATTATACGATCCCATTTCGTT
ATTAATTCACGCCCtgtgcctcttcttctcatcaGGATGTCCACTCTTCG
GTGAGCGAATACGCCTCTCTGTTCACGGGCGCGCGGGCCTCCGTTGGCCG
AATCTCCACGGACGCGAGCATCAAAACTCGACAGGCCAATTACCAGAAGC
TGGTCACCAACTTCTACGACCTGGTCACGGACTTTTACGAGTATGGATGG
GGACAGTCCTTCCATTTCGGACCGCGATGGCAGGGGGAAAGCTTCGTGGA
GTCGATCAAGAGGGCCGAGTACCACCTATGCTCCCGCCTGGGCTTAAAGC
CGGGTATGCGTGTGCTGGACATGGGCTGTGGCGTGGGGGGCCCCATGCGG
AACATGGCCATTTTTTCGGGCGCCAAGATCGACGGCATCACCATCAACGA
ATATCAAGTTAACATCGGAAACAAGTACAATGCCCAGAGGGGCCTGGCCG
ACCAGTGCCAGGCCCGTCAGGGAGACTTCCAGAACCTTCCATGGCCCGCG
GACACTTTTGACGCCGCTTTTGCCGTGGAAGCTACCTGTCATTCTCCCGA
CAAACGTCGGTGCTTTTCGGAGGCGTTTCGGGTCTTGAAGCCGGGGGGCC
TCTTTGGTAATTACGAATGGATCGTCACGGACAAATTCGACGCCAGCAAC
CCCGAACATACCCGGATCAAAGAGGGGATCGAGGTGGGGAACGGTCTTCC
TACATTAGCAACGGCAGAGCAAGTCTTGGCGGCCGTGCGTGCGGCGGGTT
TCGAAGTTCTGGATGCCTACGATGCCAACGCCGACGTGCACTCCCCCCAT
CAAATTCCGTGGTACGAGCCCTTGACGGGCAAGTTATCATGGAGCGGCTT
CCGCATGACCTGGTTGGGCCGGATCATGACGCATGCCTTTGTCACCGTAT
TGGAAGCGGCTCGGATCGCGCCCACGGGGACGGGGAAAATCAGCGGAATC
CTGAACGCAACGGCGATCGAtctggtggagggagggaaggcggaaatTTT
CACGCCCAGCTTCTTTTTTGTGGCCCGTAAACCGGACCTGTGACTgcatg
aagagggaagagataCGAAAGGGCCGCGGGTAGGGGCGCGATGACGgtgc
gaggacgggaggataagatgagggcgaggtggaTAGGTGAGATGACGGGG
GAGGGTTAGTCAGCGGCCGAGGAAAGCGGCGTAAAGCAGAGAGGAGCTGG
GTTTTTATTGACAAATAATAGGTAAAGCTCtgacaaggacaaggacgctt
ggggggggcagacgggTTCGAGAGGGTCcatggggagggacaggaggagc
ggcgggaGGTGGTAGTGGTGGTCGTGGTGGCAAATGTCTCCCTGCGCTCT
GCAAGCACTCGAGGGGTTTCAGTTCAACCACCCTTTGACAGGAACACACA
CATTGAACGGTGCGAACCACCAGCGGCTTCAGGTCAACTTTTCTTTGCGG
GTGCATGGTGGCCTCCACCCTGCGAACGAAACATTTTCCACTTCCATTCC
ACCCGGGCATGTCGCAGTCACCCCatttctacctcctcttgccCAACCTT
TCCCTGAAAGTG back to topCoding sequence (CDS) from alignment at CM002467.1:638249..640760+ >rna6127 ID=rna6127|Name=rna6127|organism=Nannochloropsis gaditana|type=CDS|length=5316bp|location=Sequence derived from alignment at CM002467.1:638249..640760+ (Nannochloropsis gaditana)
ATGTGTGCTTGTATTTGCTCGTCACCCTGTTGTCATGGCTGTTGCATGAG
TCACGGTACTTATCCTCGTACCAAACCCCGCCCATTAATCCCCACCCTCA
TTTCGCACAGGATGTTGGAGTCCATTAATGAGTTTTTCAAGCCCTTTGTG
GCTGAACATAGTGTCGCTGTCGCGGTAACCTTAAGCGTCATTGGCTTGAC
AGTGGTGGTCCTCCGCGTCCGGCGTGTGAACCTTCGACGGGATGGGATGG
ACTACAAGGGAACGGCAGCAGACGTGCTCAAAATCATGAAAAATAGCGAT
TTTGAGGCCCACAAGGACAAGGATGTCCACTCTTCGGTGAGCGAATACGC
CTCTCTGTTCACGGGCGCGCGGGCCTCCGTTGGCCGAATCTCCACGGACG
CGAGCATCAAAACTCGACAGGCCAATTACCAGAAGCTGGTCACCAACTTC
TACGACCTGGTCACGGACTTTTACGAGTATGGATGGGGACAGTCCTTCCA
TTTCGGACCGCGATGGCAGGGGGAAAGCTTCGTGGAGTCGATCAAGAGGG
CCGAGTACCACCTATGCTCCCGCCTGGGCTTAAAGCCGGGTATGCGTGTG
CTGGACATGGGCTGTGGCGTGGGGGGCCCCATGCGGAACATGGCCATTTT
TTCGGGCGCCAAGATCGACGGCATCACCATCAACGAATATCAAGTTAACA
TCGGAAACAAGTACAATGCCCAGAGGGGCCTGGCCGACCAGTGCCAGGCC
CGTCAGGGAGACTTCCAGAACCTTCCATGGCCCGCGGACACTTTTGACGC
CGCTTTTGCCGTGGAAGCTACCTGTCATTCTCCCGACAAACGTCGGTGCT
TTTCGGAGGCGTTTCGGGTCTTGAAGCCGGGGGGCCTCTTTGGTAATTAC
GAATGGATCGTCACGGACAAATTCGACGCCAGCAACCCCGAACATACCCG
GATCAAAGAGGGGATCGAGGTGGGGAACGGTCTTCCTACATTAGCAACGG
CAGAGCAAGTCTTGGCGGCCGTGCGTGCGGCGGGTTTCGAAGTTCTGGAT
GCCTACGATGCCAACGCCGACGTGCACTCCCCCCATCAAATTCCGTGGTA
CGAGCCCTTGACGGGCAAGTTATCATGGAGCGGCTTCCGCATGACCTGGT
TGGGCCGGATCATGACGCATGCCTTTGTCACCGTATTGGAAGCGGCTCGG
ATCGCGCCCACGGGGACGGGGAAAATCAGCGGAATCCTGAACGCAACGGC
GATCGAtctggtggagggagggaaggcggaaatTTTCACGCCCAGCTTCT
TTTTTGTGGCCCGTAAACCGGACCTGTGAATGTGTGCTTGTATTTGCTCG
TCACCCTGTTGTCATGGCTGTTGCATGAGTCACGGTACTTATCCTCGTAC
CAAACCCCGCCCATTAATCCCCACCCTCATTTCGCACAGGATGTTGGAGT
CCATTAATGAGTTTTTCAAGCCCTTTGTGGCTGAACATAGTGTCGCTGTC
GCGGTAACCTTAAGCGTCATTGGCTTGACAGTGGTGGTCCTCCGCGTCCG
GCGTGTGAACCTTCGACGGGATGGGATGGACTACAAGGGAACGGCAGCAG
ACGTGCTCAAAATCATGAAAAATAGCGATTTTGAGGCCCACAAGGACAAG
GATGTCCACTCTTCGGTGAGCGAATACGCCTCTCTGTTCACGGGCGCGCG
GGCCTCCGTTGGCCGAATCTCCACGGACGCGAGCATCAAAACTCGACAGG
CCAATTACCAGAAGCTGGTCACCAACTTCTACGACCTGGTCACGGACTTT
TACGAGTATGGATGGGGACAGTCCTTCCATTTCGGACCGCGATGGCAGGG
GGAAAGCTTCGTGGAGTCGATCAAGAGGGCCGAGTACCACCTATGCTCCC
GCCTGGGCTTAAAGCCGGGTATGCGTGTGCTGGACATGGGCTGTGGCGTG
GGGGGCCCCATGCGGAACATGGCCATTTTTTCGGGCGCCAAGATCGACGG
CATCACCATCAACGAATATCAAGTTAACATCGGAAACAAGTACAATGCCC
AGAGGGGCCTGGCCGACCAGTGCCAGGCCCGTCAGGGAGACTTCCAGAAC
CTTCCATGGCCCGCGGACACTTTTGACGCCGCTTTTGCCGTGGAAGCTAC
CTGTCATTCTCCCGACAAACGTCGGTGCTTTTCGGAGGCGTTTCGGGTCT
TGAAGCCGGGGGGCCTCTTTGGTAATTACGAATGGATCGTCACGGACAAA
TTCGACGCCAGCAACCCCGAACATACCCGGATCAAAGAGGGGATCGAGGT
GGGGAACGGTCTTCCTACATTAGCAACGGCAGAGCAAGTCTTGGCGGCCG
TGCGTGCGGCGGGTTTCGAAGTTCTGGATGCCTACGATGCCAACGCCGAC
GTGCACTCCCCCCATCAAATTCCGTGGTACGAGCCCTTGACGGGCAAGTT
ATCATGGAGCGGCTTCCGCATGACCTGGTTGGGCCGGATCATGACGCATG
CCTTTGTCACCGTATTGGAAGCGGCTCGGATCGCGCCCACGGGGACGGGG
AAAATCAGCGGAATCCTGAACGCAACGGCGATCGAtctggtggagggagg
gaaggcggaaatTTTCACGCCCAGCTTCTTTTTTGTGGCCCGTAAACCGG
ACCTGTGAATGTGTGCTTGTATTTGCTCGTCACCCTGTTGTCATGGCTGT
TGCATGAGTCACGGTACTTATCCTCGTACCAAACCCCGCCCATTAATCCC
CACCCTCATTTCGCACAGGATGTTGGAGTCCATTAATGAGTTTTTCAAGC
CCTTTGTGGCTGAACATAGTGTCGCTGTCGCGGTAACCTTAAGCGTCATT
GGCTTGACAGTGGTGGTCCTCCGCGTCCGGCGTGTGAACCTTCGACGGGA
TGGGATGGACTACAAGGGAACGGCAGCAGACGTGCTCAAAATCATGAAAA
ATAGCGATTTTGAGGCCCACAAGGACAAGGATGTCCACTCTTCGGTGAGC
GAATACGCCTCTCTGTTCACGGGCGCGCGGGCCTCCGTTGGCCGAATCTC
CACGGACGCGAGCATCAAAACTCGACAGGCCAATTACCAGAAGCTGGTCA
CCAACTTCTACGACCTGGTCACGGACTTTTACGAGTATGGATGGGGACAG
TCCTTCCATTTCGGACCGCGATGGCAGGGGGAAAGCTTCGTGGAGTCGAT
CAAGAGGGCCGAGTACCACCTATGCTCCCGCCTGGGCTTAAAGCCGGGTA
TGCGTGTGCTGGACATGGGCTGTGGCGTGGGGGGCCCCATGCGGAACATG
GCCATTTTTTCGGGCGCCAAGATCGACGGCATCACCATCAACGAATATCA
AGTTAACATCGGAAACAAGTACAATGCCCAGAGGGGCCTGGCCGACCAGT
GCCAGGCCCGTCAGGGAGACTTCCAGAACCTTCCATGGCCCGCGGACACT
TTTGACGCCGCTTTTGCCGTGGAAGCTACCTGTCATTCTCCCGACAAACG
TCGGTGCTTTTCGGAGGCGTTTCGGGTCTTGAAGCCGGGGGGCCTCTTTG
GTAATTACGAATGGATCGTCACGGACAAATTCGACGCCAGCAACCCCGAA
CATACCCGGATCAAAGAGGGGATCGAGGTGGGGAACGGTCTTCCTACATT
AGCAACGGCAGAGCAAGTCTTGGCGGCCGTGCGTGCGGCGGGTTTCGAAG
TTCTGGATGCCTACGATGCCAACGCCGACGTGCACTCCCCCCATCAAATT
CCGTGGTACGAGCCCTTGACGGGCAAGTTATCATGGAGCGGCTTCCGCAT
GACCTGGTTGGGCCGGATCATGACGCATGCCTTTGTCACCGTATTGGAAG
CGGCTCGGATCGCGCCCACGGGGACGGGGAAAATCAGCGGAATCCTGAAC
GCAACGGCGATCGAtctggtggagggagggaaggcggaaatTTTCACGCC
CAGCTTCTTTTTTGTGGCCCGTAAACCGGACCTGTGAATGTGTGCTTGTA
TTTGCTCGTCACCCTGTTGTCATGGCTGTTGCATGAGTCACGGTACTTAT
CCTCGTACCAAACCCCGCCCATTAATCCCCACCCTCATTTCGCACAGGAT
GTTGGAGTCCATTAATGAGTTTTTCAAGCCCTTTGTGGCTGAACATAGTG
TCGCTGTCGCGGTAACCTTAAGCGTCATTGGCTTGACAGTGGTGGTCCTC
CGCGTCCGGCGTGTGAACCTTCGACGGGATGGGATGGACTACAAGGGAAC
GGCAGCAGACGTGCTCAAAATCATGAAAAATAGCGATTTTGAGGCCCACA
AGGACAAGGATGTCCACTCTTCGGTGAGCGAATACGCCTCTCTGTTCACG
GGCGCGCGGGCCTCCGTTGGCCGAATCTCCACGGACGCGAGCATCAAAAC
TCGACAGGCCAATTACCAGAAGCTGGTCACCAACTTCTACGACCTGGTCA
CGGACTTTTACGAGTATGGATGGGGACAGTCCTTCCATTTCGGACCGCGA
TGGCAGGGGGAAAGCTTCGTGGAGTCGATCAAGAGGGCCGAGTACCACCT
ATGCTCCCGCCTGGGCTTAAAGCCGGGTATGCGTGTGCTGGACATGGGCT
GTGGCGTGGGGGGCCCCATGCGGAACATGGCCATTTTTTCGGGCGCCAAG
ATCGACGGCATCACCATCAACGAATATCAAGTTAACATCGGAAACAAGTA
CAATGCCCAGAGGGGCCTGGCCGACCAGTGCCAGGCCCGTCAGGGAGACT
TCCAGAACCTTCCATGGCCCGCGGACACTTTTGACGCCGCTTTTGCCGTG
GAAGCTACCTGTCATTCTCCCGACAAACGTCGGTGCTTTTCGGAGGCGTT
TCGGGTCTTGAAGCCGGGGGGCCTCTTTGGTAATTACGAATGGATCGTCA
CGGACAAATTCGACGCCAGCAACCCCGAACATACCCGGATCAAAGAGGGG
ATCGAGGTGGGGAACGGTCTTCCTACATTAGCAACGGCAGAGCAAGTCTT
GGCGGCCGTGCGTGCGGCGGGTTTCGAAGTTCTGGATGCCTACGATGCCA
ACGCCGACGTGCACTCCCCCCATCAAATTCCGTGGTACGAGCCCTTGACG
GGCAAGTTATCATGGAGCGGCTTCCGCATGACCTGGTTGGGCCGGATCAT
GACGCATGCCTTTGTCACCGTATTGGAAGCGGCTCGGATCGCGCCCACGG
GGACGGGGAAAATCAGCGGAATCCTGAACGCAACGGCGATCGAtctggtg
gagggagggaaggcggaaatTTTCACGCCCAGCTTCTTTTTTGTGGCCCG
TAAACCGGACCTGTGA back to top
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