rna609, rna609 (mRNA) Nannochloropsis gaditana

Overview
Namerna609
Unique Namerna609
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2762
Alignment locationCM002455.1:1520003..1520982 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100170g8.5469.mrna
Orig protein idgnl|cribi|Naga_100170g8.5469
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1520003..1520982 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100170g8gene585Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30060.1cds609Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna609rna609-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna609 ID=rna609|Name=rna609|organism=Nannochloropsis gaditana|type=mRNA|length=2762bp
ATGGCGTCTGATGGTGGCAATGCGGATACGTACGCATACGAGGAGGAGCA
GGAGCGGAAGGCACTTTTACAGAGCTTGCATGGTCCGATGAAGACGTGGT
TTCACGGAGGGGAGGCGAGCAGTATCAAGGAGCGGTTCGGGCCATACCCC
ACATTCTGGCAAGACTTGTTGACCTGGGAGCATACGCGGGTCGTGCAAAA
GCTCTATTTACGCTGGATGGACACAGGCGCGAGTGGAGAAGCCTTGATGG
CCATTTTGGAGGCAAATATGGAGAAGCCCAAGGAAGGAGAGAAGGGAGTG
GACGAATTGGGAGAGGCACAACACGGCAAGCAGGAAAAGGAGGCCGAAGA
GGGAAGGACCGGTCCCGAAGAGACGACCACCTCGAATGAAGAGAAGCCGG
CAGAGGCCCAGGCGACAGAGCCACAGAAGGAAGAGAAGGAGCAGAAGCGG
AGGAGCCGGTGGGGGGCCACGGAGGAGGGCGGAGGGGGGGAAGCAGGGGA
GGGCAAACGGCGGTCGCGGTGGGGCGACGGGGGGGCCGACGGCAACAAGA
AGAAGTCACGGTGGAGCCAGCCCGAGGCCACTCCCAGCTCCTCCATGGAT
CCGGACACGCTGCAGGAGATCATAGCCCTTCAGCTGCGCCTCGACAACAT
CCATCAACGCACGGCCACTGTTACCATGGACGCGCTGGCCCAGGAGTCAA
ATCCAGACAAGTCGCCGTCTCCGCCTCCTATCTATGACAGTCACGGGAAG
CGTTTGAACACGCGGGAAGAGCGTATGAAGGCAGCGCTCAAGAAGGAACG
GCAGGATGTCATCGAGCGCCTCCTCAAGATCAACCCTCTCTTCCGCCCCC
CGGCTGACTACGTGCGCCAAAAGCCCTTCCGCCGTCTTTACATTCCCATC
AAAGAGTTTCCGACCTACAACTTTATCGGGCTCATTATCGGACCTCGCGG
GGCCACGCAAAAGCAGATGGAGAAGGACACCGGTGCCAAAATATCCATCC
GAGGCAAAGGGTCTGTGAAGGAAGGCTCGCGCAATCGCATGCTTGGAGCG
AACAAGGACGTGCAAGACGAGTTCGACGACTTGCACGTCCATGTCAGCGG
CGAGACCGAGGAGATCGTGGAGAAGGCGTCGGAGATGGTTGCGAAGCTGC
TGATTCCCATCGACGACGCTGTGAATTCTCAGAAAATGGAGCAACTGAGG
CAGCTGGCCCTGATCAATGGCACGCTCCGCGAAGACGAGTACTGCAACCT
ATGCGGAGAGAAGGGTCATCGTCAGTTTGAATGCCCCACGCGACACAACA
CGAAGGTGAAGATGGTGAACGTCAAGTGCGCGATTTGCGGGGATACCTCC
CATCCCACCCGCGATTGCAGGATGGGCGGCCAGGCGGGCGGTAGGTTTGA
GATGGGATGCGCGGGAGGCAAGAGGCCCGAGGGAGGTGGATGGAGAAGGG
CAGGTCGTCTCACCTCGTTCCCCTTGCATTCTTCTCTTCCTCCCCGTTCC
GTCAGCCCAAAGCGGGAATAAGGAAGTGCTGGATCAAGAATACCTTAACT
TTATGGCCGAGCTGGGCGAGGGTCCTCCTCCTTCTTCTTCCGCTGCCCCC
CCTCCGCCCCGTTCCTCCCCCCGGCAAGAGCAAAAAGACGCAGCCCCTCC
CCCCCCTCCGGCGGCGCCCCCCACGGCCGCTCACACTTCCAGCTCTTCTT
CCTCCACTTCCTCCTCCTCACCTTACTACAACACACCGGGCGCCTCCGCA
GGCGGGGGTCAACCGCCCCATCAGCACACGGGCGCTCCTTCTCCGTACTA
CCAGACGCCCGCAGGAAGCGGATATGGCTACGCTTCCCACTACGCCCAGC
CCCCTCCTCAACACGGCGCACCCTACGGGGCCAACTCCCTCGCTGGAGGA
GGTATGGGGGGGATACGAGTACGCGGCGTACTACCAACAGCAGCAGGCCG
CCGCATCCGCCTACTATTCTCAGCAACAGCACTATCACCCGCAGTATCAC
ATGCACGGGGCTTATGCAGATGGAGGGCCTCCCCCTCCCCCTCCCCCTCC
TCCTCCCCCCCCCCCTCCGTCCCAGATCGGTAACGGAAGCGCCGCGGGAA
GCCTGGTCGCTCCTCCACCTCCGCCGCCTCCTCCCCCGCCGCCGCCCCCC
GCCACTGTGTAAAGGTAAGTGACGCGTTGAAGAGAAAGATGCTGAAGCGG
CAGAGTAGGGGGGAGGGCGACGAAATTGGAGTGGAAGGAAAGGGAAGGCG
CGAAGGATGGGGAAAATAGGGAGAAGAGTATACGTGGCAATGTGTGTGTG
CGTGAAATGTGGCGATGTTTGCAAGGATTTACGGAAAGAAAAGATATGAT
GGAGGCGCCTAGGGAGTCCCCAAGAGCTTAGCAGTCTGCTTGCTGTGCAT
TCATGGAGTCGTTTATTCGGCGCTTAATACGTGCTTTGCGGTGAATCATC
ACCTTTAATACATTCAAAGGTCCTTCCGCCGCTCGTTGTACATAAATTTT
GGTCCTAAGCTACTTTGTGCGTGGACGTCAGCAGAGGAGTTTGCTCTTCC
AGATCCCTGTACTTTCTCCCGTCGTCTTCACGCGTGCGGTCTACATTCGC
ACCTACTGCGCCATAGCTATTCCTCCCCACACCCCCTTCCGCCTCGTCCC
CCTTTCTCTCTCCGTCCTCCCGGTCTTCCCCCCGTTCCACGCACCAGACG
GCACACATTCCAACGTGCATCCACACCCCTAACGCCAGTACCACCGATCC
TAGCACCACTTC
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protein sequence of rna609

>rna609-protein ID=rna609-protein|Name=rna609|organism=Nannochloropsis gaditana|type=polypeptide|length=288bp
MVGVGAGFYLTGWSGGAGGEEVGGDDAGSHRDRIHGVAGGRCRGPSSSAR
EVGSHVSLSSSASASSHRDRNFLRPRHILLVIAGILSLVTAVAVPLAYNE
VFLADKETRANLAERRQTLLFTSLLLAHPLLALHLHHFLGYIPSRTNICF
PWWSFTFPKMKGRVGYYWCLAWLTASFAFLLLVALDVRTQTALGLVPMPL
KLWEVVLGSVVLALGVWMHVGMCAVWCVERGEDREDGERKGDEAEGGVGR
NSYGAVGANVDRTREDDGRKYRDLEEQTPLLTSTHKVA
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mRNA from alignment at CM002455.1:1520003..1520982-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna609 ID=rna609|Name=rna609|organism=Nannochloropsis gaditana|type=mRNA|length=980bp|location=Sequence derived from alignment at CM002455.1:1520003..1520982- (Nannochloropsis gaditana)
ATGGTGGGGGTAGGGGCCGGCTTCTATCTGACCGGGTGGTCGGGCGGGGC
GGGGGGGGAAGAGGTGGGGGGCGATGATGCTGGGAGCCACCGCGACAGGA
TTCACGGTGTGGCTGGAGGTCGGTGCAGGGGGCCTTCCTCGAGTGCCCGC
GAGGTCGGCAGCCACGTATCCCTTTCCTCCTCCGCCTCCGCCTCGTCCCA
CCGCGATCGAAATTTCCTCCGTCCTCGCCACATTTTGCTCGTCATTGCTG
GGATCTTATCTCTTGTGACTGCCGTAGCCGTCCCGCTGGCGTACAACGAA
GTCTTTCTTGCCGATAAAGAAACGAGAGCCAACCTTGCGGAACGCCGACA
GACGCTTTTGTTCACTTCCCTACTTCTAGCCCACCCGCTTTTGGCCCTCC
ACCTCCATCATTTCCTTGGATATATCCCCTCACGCACTAATATATGCTTT
CCGTGGTGGTCCTTTACCTTTCCAAAAATGAAAGGAAGGGTCGGCTACTA
TTGGTGCCTCGCATGGTTGACGGCGTCGTTCGCCTTCCTCCTGCTCGTGG
CGTTAGACGTGCGTACACAGACTGCCCTGGGACTGGTCCCTATGCCTCTT
AAACTGTGGGAAGTGGTGCTAGGATCGGTGGTACTGGCGTTAGGGGTGTG
GATGCACGTTGGAATGTGTGCCGTCTGGTGCGTGGAACGGGGGGAAGACC
GGGAGGACGGAGAGAGAAAGGGGGACGAGGCGGAAGGGGGTGTGGGGAGG
AATAGCTATGGCGCAGTAGGTGCGAATGTAGACCGCACGCGTGAAGACGA
CGGGAGAAAGTACAGGGATCTGGAAGAGCAAACTCCTCTGCTGACGTCCA
CGCACAAAGTAGCTTAGGACCAAAATTTATGTACAACGAGCGGCGGAAGG
ACCTTTGAATGTATTAAAGGTGATGATTCACCGCAAAGCACGTATTAAGC
GCCGAATAAACGACTCCATGAATGCACAGC
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Coding sequence (CDS) from alignment at CM002455.1:1520003..1520982-

>rna609 ID=rna609|Name=rna609|organism=Nannochloropsis gaditana|type=CDS|length=867bp|location=Sequence derived from alignment at CM002455.1:1520003..1520982- (Nannochloropsis gaditana)
ATGGTGGGGGTAGGGGCCGGCTTCTATCTGACCGGGTGGTCGGGCGGGGC
GGGGGGGGAAGAGGTGGGGGGCGATGATGCTGGGAGCCACCGCGACAGGA
TTCACGGTGTGGCTGGAGGTCGGTGCAGGGGGCCTTCCTCGAGTGCCCGC
GAGGTCGGCAGCCACGTATCCCTTTCCTCCTCCGCCTCCGCCTCGTCCCA
CCGCGATCGAAATTTCCTCCGTCCTCGCCACATTTTGCTCGTCATTGCTG
GGATCTTATCTCTTGTGACTGCCGTAGCCGTCCCGCTGGCGTACAACGAA
GTCTTTCTTGCCGATAAAGAAACGAGAGCCAACCTTGCGGAACGCCGACA
GACGCTTTTGTTCACTTCCCTACTTCTAGCCCACCCGCTTTTGGCCCTCC
ACCTCCATCATTTCCTTGGATATATCCCCTCACGCACTAATATATGCTTT
CCGTGGTGGTCCTTTACCTTTCCAAAAATGAAAGGAAGGGTCGGCTACTA
TTGGTGCCTCGCATGGTTGACGGCGTCGTTCGCCTTCCTCCTGCTCGTGG
CGTTAGACGTGCGTACACAGACTGCCCTGGGACTGGTCCCTATGCCTCTT
AAACTGTGGGAAGTGGTGCTAGGATCGGTGGTACTGGCGTTAGGGGTGTG
GATGCACGTTGGAATGTGTGCCGTCTGGTGCGTGGAACGGGGGGAAGACC
GGGAGGACGGAGAGAGAAAGGGGGACGAGGCGGAAGGGGGTGTGGGGAGG
AATAGCTATGGCGCAGTAGGTGCGAATGTAGACCGCACGCGTGAAGACGA
CGGGAGAAAGTACAGGGATCTGGAAGAGCAAACTCCTCTGCTGACGTCCA
CGCACAAAGTAGCTTAG
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Synonyms
Publications