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Properties
| Property Name | Value |
|---|
| Product | Lipase, class 3 |
| Orig transcript id | gnl|cribi|Naga_100171g1.2664.mrna |
| Orig protein id | gnl|cribi|Naga_100171g1.2664 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:534871..537977 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6085 ID=rna6085|Name=rna6085|organism=Nannochloropsis gaditana|type=mRNA|length=1597bp
TTCAGCAAGAAGCAACAGGCGTGGGTGGCCTACTGAGGTTTTTATAAGGC
AAGAACATGTATACTATCACTTGACGTAACCGACTAACATGCACGTGTAC
TCCGCTCCCAATCGCAGCAGCATGCCGTCGACTTCGTCCGGGGGTGCAAG
CGCGGAGGAGCTCACCAGGCGGCATCTCAAGGAGCTGGACAGGTATGTTG
ACGTGCCTAGACTCAACGACAGCACCCGCTTGAGTGTGTACTACGGAATG
AGCAAACAAGTGCTGGCCCAGGCACAGGAATTTCGGAGGTCTCACGACCT
CGAGCGGGCTTACATTTTCTACAAGCGCTTCCTGCGATTGGCCCTGGATT
GCATACCAGAGCACGTCGCATACAAAGACGGCACCTTCAGTCGCGACAAA
AATTGGCTGGTCCGTGAGCGGCGCCAGGCTCTGAAAGCGTTGGAGGAGGT
TAATGCTGATATCACCGCAGAGACAGCCGCCTACCATCGCCGCGTCCCAC
CTGCCCTCGGTGTGCCTCCTGCTCCTTCGTTTCCGTCGCGAGGAGCGTCG
CTGTCTGCCGCCTCGGACTGTAGCGGTGAGGACGAGGACCTTACGCGTCG
GTTTCAGAGACTGCGGGGAGGAGGTGCGCCCTCGTACCCGGGGATTGACA
GTTCTTTTGGCCAAGGAGACACCGCATCAGAAGAAAACGAGGCTCCTTTG
TCCCCCGTTTTGACGATGCCGGAGCCGTCGGCGCCGCCCCTCTTCCTTGA
CGACGGACCAGCACCCCAGGACGCAGCGGAAAACGAGGGCTTGAGCGCCC
GCGAGCTCGACGCCGCCTTCCAGTCCCTTCGGATGGCGGACGGGGACGAT
GAACCGTCTCAAGTGCGACGCTTCTACCCCTCCCTTCCCTCGAGCAGGGC
TTCCCAGCCCAAGGGAGAGGAGAGGATGGGCTCTCCCCTGATCCCGGGCC
AGGCCAACTGGTTCAGCAAACGAGGCAAGCTTAGACCACTGATGCTTCCG
GCTGGCTTGGTAGGAAAGTTCTTGGAGATCGCCGACAAGAACAGTAGGAA
GCCTCCAGATGGGATCGAGACCTGTGGCGTGCTCGCCGGAGTACGCGACG
GCCAAGGTCTCATGCGTTGCACTACCCTGATAATCCCCAAGCAAGAAGGC
ACATCAGACACAGTAAGTATGACACACGAAGAGGAACTGATCAGCTTCTG
CTGCTCTGGGAAGCACCCGATGGGAGAGGAAGGAAACCTCCTGCAACTTG
GCTGGATTCACACCCACCCCAGTCAGAGCTGCTTCATGTCCTCAGTAGAC
ATCCACACGCATTGCGGCTATCAAACCATGCTTCCCGAGGCCGTAGCCGT
GGTGGTAGCCTTAGTAAACTCGCGGAGGCCGCAAGTGGGAGTCTTCCGTC
TCACTGAGCCCGAAGGGCTTCAACTTATCCAACGTTGTGAGCTCCGAGGT
TTCCATCCCCATCCCATACCCGATCCTCAAATTTACAAAAGTCATCACAC
TGTCGTTTGGGAGGAATCAGGATTTTCTGTTGTGGATCTTAGATCGTAAA
CGCATCAAAACCAGACAGAGAGAAGCAACAAATAGTACTGATTCTGA back to topprotein sequence of rna6085 >rna6085-protein ID=rna6085-protein|Name=rna6085|organism=Nannochloropsis gaditana|type=polypeptide|length=851bp
MRYVHDRDIKSYWCRVKGFQTGKTSQRADHPTSGVIAVGDTLLTASAAQP
FTTSSILILSLSPFPPIPFSGTALHAARWGHTANRGVASVSRYLSRTLIA
RAAAATVTEMSRFTADRTREVLDYATLQLVQSGHKPLPPENGWGDVGRRL
GSISAYDLQLIDEKVRDVGLSEFADMLGVADPGELLRVAELRLQAAQGDE
DAQYALAARFCPPPFRKRDRCKKCHKAFGVTRYRHHCRHCGESFCQEHSA
FRHAIPKVGYMVPARVCGACKGQLEDEDLKDRVVWRMVRVEAFLKDRLIP
YFAPGDHTHLDRALRTVGGWVSRAARRAPPLRSTTALAGEALELFSRYGY
AGVAGVLLRHEHVEAVELLKAVSGVDAAWPVTGSQLSAAMYYLLARGRGE
RGAAPDAEQEAHRGCPPASDSLMQDLLDVAPLALHFAYCDNLVEMQLKAQ
QQGWRLVFAYAPPAAQAGQPAFVLLCHLTEKEACLVVRGPDRAQDVLVDI
RGLPMPFPLAGEGAGSGEKGSQDKESGWANVSTEWMASCGAAEAGHWLFS
EVYPHLHRLAKEGYSLTLAGHSAGGAVAALLGVLMREEGMTEGLRCYTFG
SPACVNQKLAQVCEAFVTTVVLHDDVIPRVTPTGVRGLLKDLLSERERAE
QHWQDDVEAIIVRSKGHWAPRWRRVLSRGGREKGAAPGSRSLSFIRSEDE
GERGEGEGEGWTGRTREGEGKEGGVGEGAGEGWDSCDDDLGNYWGVGCTR
DVVSVGSGAASNRYSIRHEDGTTTTVNLALARRRLLDSGGDAAADRGSSV
SKNVTGACPAPCGLGEAGVNSALTSLGTSVPGLGAASSPGAESGEAGRRE
G back to topmRNA from alignment at CM002467.1:534871..537977+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6085 ID=rna6085|Name=rna6085|organism=Nannochloropsis gaditana|type=mRNA|length=3107bp|location=Sequence derived from alignment at CM002467.1:534871..537977+ (Nannochloropsis gaditana)
TGCATGGATGGCTTGGTCTCGTTGGACTTCCAACTAGACATGATTTACGG
GCAAGATTGTCCAGCGCACCTTGCTCGCATGCCTGGACGTCAActcgagg
agctggagcaaCTTCACGTTGatttccccgcccgcgcgTTGGCACTCATC
CTCTTTGTCCAATGCAATACATTTTCCTTGCCATTTGACGCACAGAGAGC
TGAAGAGCACGCAAGAGCATGCACACCGACTGATTAAAGGACCCTCCCAA
GATTGGGCCCGGTGATTGCTGGCACCCCGCCATCGGGAACCTGCCGACTC
TTTTTTCATTCCCGGAAGAAGATAAGGCAAGTAATTGAGGTGAATGATGC
CAAAAGACGGAACCCTGGCCAACAAGAAGGGgcaggacggagaagaggcT
AAGTCTGCGCTTGTTGCAGTCCCAAGCAGAGATCATGGGAGAAGCGCCAG
CAtcaccagcaccagcagcgtcagcagcaccagcagcagtggcagtggag
ggacCGCGGCCGTCGCTATGGTCACAACAGCCCTGACGCGGTAAGTCACG
AGGGATGAGATATGTGCATGACCGGGATATCAAGTCGTACTGGTGTAGAG
TGAAAGGCTTTCAGACCGGGAAGACCAGCCAGAGGGCCGACCACCCGACG
TCGGGAGTGATAGCGGTTGGAGACACGCTGTTGACCGCCTCCGCGGCACA
GCCATTCACGACTTCCAGCATTTTgatcctctctctttccccttttcccc
ctatACCTTTCAGCGGTACCGCCCTGCACGCCGCCCGCTGGGGTCATACC
GCCAACCGGGGCGTGGCCTCAGTGTCCCGCTACTTGAGCAGGACCCTGAT
CGCCCgagctgccgccgccaccgtcacAGAAATGAGCCGGTTCACGGCAG
ACCGGACCCGAGAGGTGCTTGACTATGCCACTTTACAGCTTGTCCAGAGC
GGGCACAagcctctgcctcctgagAACGGTTGGGGGGACGTGGGCAGGCG
GCTGGGCTCGATCTCCGCCTACGATCTGCAGCTGATCGACGAAAAAGTCC
GGGACGTGGGACTGTCGGAATTTGCAGACATGCTGGGGGTTGCAGACCCT
GGAGAGCTGCTGCGGGTGGCGGAGCTGCGGCTACAGGCGGCCCAAGGTGA
CGAGGACGCTCAGTACGCCCTCGCGGCGCgcttttgtcctcctcctttcc
gcaAACGGGACCGTTGCAAGAAATGCCACAAGGCCTTCGGGGTGACCCGC
TACCGGCACCATTGCCGGCATTGCGGGGAGAGCTTCTGCCAGGAGCACAG
CGCTTTCAGGCACGCCATTCCCAAGGTCGGTTACATGGTCCCGGCCCGGG
TGTGCGGCGCCTGCAAGGGCCagctggaggacgaggaccttAAAGACCGG
GTCGTCTGGCGGATGGTGCGGGTCGAGGCCTTTCTGAAGGACCGTTTGAT
CCCTTACTTTGCCCCGGGGGACCATACGCATCTGGACAGGGCCTTGCGGA
CGGTGGGCGGGTGGGTAAGCCGCGCAGCGCGCcgggccccgcccctgcGC
AGCACAACGGCCTTGGCTGGCGAAGCCTTGGAGCTCTTCAGCCGGTACGG
GTACGCGGGCGTAGCGGGGGTCTTGCTTCGGCACGAGCACGTGGAGGCGG
TCGAGCTGCTCAAGGCGGTGTCGGGGGTGGATGCCGCCTGGCCCGTGACG
GGAAGCCAGCTGAGCGCGGCGATGTACTACCTGCTGgcacggggaagggg
ggagcgaggagcgGCTCCCGAtgccgagcaggaggcgcaCCGAGGATGCC
CACCGGCCTCGGACAGCTTGATGCAGGACCTGTTGGACGTGGCGCCCTTG
GCCTTGCATTTCGCCTACTGCGACAACCTGGTGGAGATGCAACTCAAGGC
ACAGCAGCAAGGGTGGCGGTTGGTGTTCGCCTACgcgccccccgccgccc
agGCTGGGCAGCCGGCCTTCGTCTTGCTCTGCCACTTGACCGAAAAGGAG
GCTTGCCTGGTGGTGCGTGGTCCCGACCGGGCGCAGGATGTTCTCGTCGA
CATCCGGGGCCTGCCcatgccctttcccctcgcgggggagggggccggga
gcggggagaagggcagtcaggacaaggagagcggGTGGGCGAACGTCTCG
ACGGAGTGGATGGCTTCCTGTGGAGCGGCCGAGGCGGGCCATTGGCTCTT
CAGCGAGGTCTACCCCCATCTCCATCggctggccaaggagggctaCTCCT
TGACGCTGGCGGGGCACtcggcgggcggggcggtggcggccttgCTGGGG
GTGCTGatgcgagaggaagggatgacggAGGGGTTGCGGTGCTACACATT
TGGTAGCCCTGCCTGCGTGAACCAGAAGCTGGCTCAAGTGTGCGAGGCCT
TCGTGACCACGGTGGTGCTGCACGACGACGTCATTCCGCGGGTGACACCC
ACGGGCGTGCGGGGCCTCTTGAAAGACCTGCTCtcggagcgggagagggc
agaGCAGCATTGGcaggacgacgtggaggcgatCATCGTCAGGAGCAAAG
GCCATTGGGCGCCACGGTGGAGGCGGGTCTTgtcgcggggggggcgggag
aagggggcggcCCCCGGGAGCCGGTCACTGTCCTTCATtcggagcgagga
cgagggggagaggggggaaggtgagggggaagggtggactggcaggacga
gggaaggtgagggaaaagagggaggggttggggagggcgcgggggagggg
tgggacaGCTGCGACGACGACCTCGGGAACTACTGGGGCGTGGGCTGCAC
GCGTGACGTGGTGTCCGTGGGCTCCGGCGCCGCCTCGAACCGTTACTCGA
TCCGGCACGAGGacggcaccaccaccacggtGAACCTGGCCCTCGCCCGG
CGCCGGCTCTTGGATtcgggcggggacgcggcGGCTGACCGAGGGAGCTC
GGTCTCGAAAAATGTCACGGGCGCCTGCCCCGCGCCTTGCGGGCTTGGCG
AGGCGGGCGTCAACTCCGCGCTCACGTCATTGGGGACTTCTGTTCCGGGC
CTGGGGGCTGCCTCGTCTCCCGGGGCTGAGAGTGGGGAGgctggaaggag
agaaggg back to topCoding sequence (CDS) from alignment at CM002467.1:534871..537977+ >rna6085 ID=rna6085|Name=rna6085|organism=Nannochloropsis gaditana|type=CDS|length=2553bp|location=Sequence derived from alignment at CM002467.1:534871..537977+ (Nannochloropsis gaditana)
ATGAGATATGTGCATGACCGGGATATCAAGTCGTACTGGTGTAGAGTGAA
AGGCTTTCAGACCGGGAAGACCAGCCAGAGGGCCGACCACCCGACGTCGG
GAGTGATAGCGGTTGGAGACACGCTGTTGACCGCCTCCGCGGCACAGCCA
TTCACGACTTCCAGCATTTTgatcctctctctttccccttttccccctat
ACCTTTCAGCGGTACCGCCCTGCACGCCGCCCGCTGGGGTCATACCGCCA
ACCGGGGCGTGGCCTCAGTGTCCCGCTACTTGAGCAGGACCCTGATCGCC
CgagctgccgccgccaccgtcacAGAAATGAGCCGGTTCACGGCAGACCG
GACCCGAGAGGTGCTTGACTATGCCACTTTACAGCTTGTCCAGAGCGGGC
ACAagcctctgcctcctgagAACGGTTGGGGGGACGTGGGCAGGCGGCTG
GGCTCGATCTCCGCCTACGATCTGCAGCTGATCGACGAAAAAGTCCGGGA
CGTGGGACTGTCGGAATTTGCAGACATGCTGGGGGTTGCAGACCCTGGAG
AGCTGCTGCGGGTGGCGGAGCTGCGGCTACAGGCGGCCCAAGGTGACGAG
GACGCTCAGTACGCCCTCGCGGCGCgcttttgtcctcctcctttccgcaA
ACGGGACCGTTGCAAGAAATGCCACAAGGCCTTCGGGGTGACCCGCTACC
GGCACCATTGCCGGCATTGCGGGGAGAGCTTCTGCCAGGAGCACAGCGCT
TTCAGGCACGCCATTCCCAAGGTCGGTTACATGGTCCCGGCCCGGGTGTG
CGGCGCCTGCAAGGGCCagctggaggacgaggaccttAAAGACCGGGTCG
TCTGGCGGATGGTGCGGGTCGAGGCCTTTCTGAAGGACCGTTTGATCCCT
TACTTTGCCCCGGGGGACCATACGCATCTGGACAGGGCCTTGCGGACGGT
GGGCGGGTGGGTAAGCCGCGCAGCGCGCcgggccccgcccctgcGCAGCA
CAACGGCCTTGGCTGGCGAAGCCTTGGAGCTCTTCAGCCGGTACGGGTAC
GCGGGCGTAGCGGGGGTCTTGCTTCGGCACGAGCACGTGGAGGCGGTCGA
GCTGCTCAAGGCGGTGTCGGGGGTGGATGCCGCCTGGCCCGTGACGGGAA
GCCAGCTGAGCGCGGCGATGTACTACCTGCTGgcacggggaaggggggag
cgaggagcgGCTCCCGAtgccgagcaggaggcgcaCCGAGGATGCCCACC
GGCCTCGGACAGCTTGATGCAGGACCTGTTGGACGTGGCGCCCTTGGCCT
TGCATTTCGCCTACTGCGACAACCTGGTGGAGATGCAACTCAAGGCACAG
CAGCAAGGGTGGCGGTTGGTGTTCGCCTACgcgccccccgccgcccagGC
TGGGCAGCCGGCCTTCGTCTTGCTCTGCCACTTGACCGAAAAGGAGGCTT
GCCTGGTGGTGCGTGGTCCCGACCGGGCGCAGGATGTTCTCGTCGACATC
CGGGGCCTGCCcatgccctttcccctcgcgggggagggggccgggagcgg
ggagaagggcagtcaggacaaggagagcggGTGGGCGAACGTCTCGACGG
AGTGGATGGCTTCCTGTGGAGCGGCCGAGGCGGGCCATTGGCTCTTCAGC
GAGGTCTACCCCCATCTCCATCggctggccaaggagggctaCTCCTTGAC
GCTGGCGGGGCACtcggcgggcggggcggtggcggccttgCTGGGGGTGC
TGatgcgagaggaagggatgacggAGGGGTTGCGGTGCTACACATTTGGT
AGCCCTGCCTGCGTGAACCAGAAGCTGGCTCAAGTGTGCGAGGCCTTCGT
GACCACGGTGGTGCTGCACGACGACGTCATTCCGCGGGTGACACCCACGG
GCGTGCGGGGCCTCTTGAAAGACCTGCTCtcggagcgggagagggcagaG
CAGCATTGGcaggacgacgtggaggcgatCATCGTCAGGAGCAAAGGCCA
TTGGGCGCCACGGTGGAGGCGGGTCTTgtcgcggggggggcgggagaagg
gggcggcCCCCGGGAGCCGGTCACTGTCCTTCATtcggagcgaggacgag
ggggagaggggggaaggtgagggggaagggtggactggcaggacgaggga
aggtgagggaaaagagggaggggttggggagggcgcgggggaggggtggg
acaGCTGCGACGACGACCTCGGGAACTACTGGGGCGTGGGCTGCACGCGT
GACGTGGTGTCCGTGGGCTCCGGCGCCGCCTCGAACCGTTACTCGATCCG
GCACGAGGacggcaccaccaccacggtGAACCTGGCCCTCGCCCGGCGCC
GGCTCTTGGATtcgggcggggacgcggcGGCTGACCGAGGGAGCTCGGTC
TCGAAAAATGTCACGGGCGCCTGCCCCGCGCCTTGCGGGCTTGGCGAGGC
GGGCGTCAACTCCGCGCTCACGTCATTGGGGACTTCTGTTCCGGGCCTGG
GGGCTGCCTCGTCTCCCGGGGCTGAGAGTGGGGAGgctggaaggagagaa
ggg back to top
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