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Properties
| Property Name | Value |
|---|
| Product | spinster-like protein |
| Orig transcript id | gnl|cribi|Naga_100117g1.398.mrna |
| Orig protein id | gnl|cribi|Naga_100117g1.398 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:495123..497591 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6070 ID=rna6070|Name=rna6070|organism=Nannochloropsis gaditana|type=mRNA|length=522bp
ATGCCGTTGCCGTTTTATGGACCCATGGCATGCACTCATGCTGCTCGTCT
TAACGGAATGTCAACAAGAAAGGTGGATGTAGTTAGCGAGGAAGCCTTCC
CAAAAGCGTTACCCGCAAGCCTTGAACTGACACGTCACCACGCAAGATCC
CAGTATCGTCGTCCTGGGTCTCCCCTCTCTGCTTCGAAACCTATTCTGCA
TCGTAGTGAAGTAGGTGCTTATTGCCTACCGAGTGGATCCTCACAGCATG
TGGACGAGGATGAGGGGCTGATAGGTGAGGGTGTGCAGCCAGGCAGGTTA
ATGATCTTGGTCCCGGCTGCGGTCAGGGCGTATCACGTGACTCGCTTCAA
AGGGGCCGATCACACAAGTTTCGTGGCGCAGGGTAGCGTGAGGCAAATAA
GCGGTCTGGACATGGGAGTCAGGGAGTGGAGTTTGCTAATCATAGCAGCC
ATCAGCGCCTCTAGTGGAACCAGAATCTGGGAGCGGCTGCTTAGACAAGT
GCCGCGCTTGGGCCGCTGCTAG back to topprotein sequence of rna6070 >rna6070-protein ID=rna6070-protein|Name=rna6070|organism=Nannochloropsis gaditana|type=polypeptide|length=595bp
MGLLGALAAAQAVLKISFSHLPHALRRRFNRTCPLIEQLPRVKSPLRMSR
DPRLGSTQAWWTNELAFTFLFFLNLLNYIDRGIIPGAAEEFSDFVAHSLG
TSSPDLFVGLLQSAFIVGFSLAAIVFGHVIHYVAPFKMVGVGLVIWIIAT
ALSGLAHHVASYYLLCIARMLSGVGEAGFQCVAPPFILDLGGDSGGRWVA
VFYTAIPLGTAIGYPWGALFAGSPWTWAGGFWVASFLMLPFAVTCFLLPF
TWRPERAPIEGDDVRTDGDLKIAAKKASRDKNGTDSAELHSVTRHDALLR
HEQEVSVADAEAQFEARHMSLLREACVVLRRPVFLLNAFGYAANTGMMIG
ASTFSSKIMLDFGFFSSESSASSVFGIALSLAGLLGTPLGGVLVDRRHFH
SEEAKLVFLLRQSTIFATLGCICSSLSCWIYQREVFLVFFVAGALLLFVC
TASINMVTMLSVPPANRSFAIGLCTLIMHALGDVPSPIVVGAILDTLAPD
CAADMKKDGKVSPECTAQVSQVRLTLFITCMWLLVAILCWGVGYVVARRE
YHRHHAAHRYLYLDCGSVEGEKMSRSGDRSSEVPDERNQPLLRKI back to topmRNA from alignment at CM002467.1:495123..497591+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6070 ID=rna6070|Name=rna6070|organism=Nannochloropsis gaditana|type=mRNA|length=2469bp|location=Sequence derived from alignment at CM002467.1:495123..497591+ (Nannochloropsis gaditana)
GAAGAACAAAACTTGGTCGTCGAACACCTGGTCTCCTGTCACTTTTCAAT
TGGCTTGACGTCTCCGTGCTAGCAACTTGCTATTTGTAGTGGCGAGCTTG
GTGAAGCGCTTTCCAGCAAATACACGCAATGTTTAGTTAAAGTGTTTCGA
GTAACACGCCCGTCGAGAGCCTGGAGCTGCCGTGCAATAAGAAGTATTTG
TTGCCGGTTGCCGCCACCCGTTTGCTACAGGATTTTAATGGAACAATTGA
CCAACCAAAACCTATTCATTCCCGTAGCGACAAGAGTATAAACTGAGAGG
TACTAGGCGCCATTGACCACAAGCCTTAGGAGGTGCCGGGAAATAGTAAT
CCACCTTACCGGAAAAGTAAAGATTTTGCAGCTTAACACAACACGTCACA
GAACACGATGATATTGATCAGTAATGATTTTACAACTTTTTTGAGCGTGT
TCACGCGTTCATGAATGATGAGGAATGGGATTACTTGGTGCTCTTGCGGC
AGCGCAAGCAGTTTTGAAAATCAGTTTCTCACATTTACCTCACGCTTTAA
GACGACGCTTCAATCGCACATGTCCCTTGATTGAACAGCTGCCAAGGGTC
AAAAGTCCCTTAAGGATGTCGCGTGACCCACGACTGGGTTCGACACAAGC
GTGGTGGACGAATGAGCTAGCTTTTacattcctcttctttttgaaCCTTC
TGAACTACATTGACCGTGGCATCATCCCCGGGGCTGCAGAGGAGTTCAGT
GACTTCGTTGCTCACTCTCTTGGTACTTCAAGCCCGGACTTGTTCGTAGG
ATTGCTGCAATCCGCATTCATTGTGGGCTTCTCTCTAGCGGCTATTGTCT
TCGGACATGTAATCCACTACGTGGCTCCTTTCAAGATGGTTGGAGTCGGA
CTTGTGATCTGGATCATCGCCACAGCTTTGAGCGGCTTGGCCCACCACGT
TGCGTCCTACTATCTGCTCTGCATCGCGCGCATGCTCAGCggcgtggggg
aggccggTTTCCAGTGCGTGGCCCCGCCCTTTATCCTGGACCTGGGCGGG
GACAGCGGGGGTCGATGGGTCGCCGTTTTCTACACAGCCATCCCTTTGGG
CACGGCGATCGGCTATCCTTGGGGCGCCTTATTCGCGGGCTCTCCTtgga
catgggccgggggcTTCTGGGTAGCGTCCTTTCTGATGCTTCCGTTCGCT
GTGACGTGTTTCCTGCTGCCTTTCACCTGGAGGCCCGAACGCGCGCCTAT
CGAAGGGGATGACGTCCGGACAGACGGCGACTTGAAAATTGCTGCCAAGA
AAGCATCTAGAGACAAAAATGGGACCGACAGCGCTGAACTTCACAGTGTG
ACAAGACATGACGCTTTGTTGCGACACGAGCAGGAGGTTTCTGTTGCTGA
TGCAGAAGCACAATTTGAAGCCCGCCATATGTCGCTACTCAGAGAGGCCT
GTGTGGTGCTGCGACGGCCAGTATTTTTGCTGAATGCTTTTGGTTACGCT
GCTAACACGGGGATGATGATTGGAGCATCGACGTTTTCGAGTAAGATAAT
GCTGGATTttggctttttttcctcggaAAGCAGTGCTTCCAGCGTTTTTG
GAATCGCTCTATCGTTGGCTGGGCTCTTAGGTACGCCCTTAGGGGGGGTC
CTTGTAGATCGTCGACATTTCCATTCGGAAGAAGCAAAGCTGGTGTTTCT
ACTGCGTCAAAGTACGATATTTGCGACGCTGGGTTGTATTTGTTCGTCCC
TAAGCTGCTGGATTTATCAGCGCGAGGTCTTTCTCGTGTTTTTTGTGGCC
GGCGCTCTACTCCTCTTTGTCTGCACAGCCTCAATCAACATGGTTACCAT
GCTCTCTGTGCCCCCAGCAAACCGCTCGTTCGCTATTGGCCTCTGCACAC
TCATCATGCATGCTTTAGGCGATGTGCCCTCTCCCATCGTTGTTGGTGCG
ATCCTTGACACCTTGGCTCCAGATTGTGCTGCAGACATGAAGAAAGACGG
GAAAGTGTCCCCGGAATGTACGGCTCAGGTTTCTCAAGTCCGTTTGACGT
TATTCATTACGTGCATGTGGCTCTTGGTTGCGATTTTATGCTGGGGAGTG
GGTTATGTTGTGGCCAGGAGAGAATATCACAGGCACCACGCGGCGCACCG
TTACCTCTATTTGGACTGTGGGTCTGTcgaaggagaaaagatgaGTCGGT
CTGGCGACCGCTCATCTGAGGTCCCAGACGAACGTAATCAGCCGCTCTTG
CGCAAAATATAGTCAAGACAGATGTAATATAATGCCAGCCTAGACTGAGT
TGTAGATCTAAAGGAAGAAATGCACCCTGAAGAAGAATCATAAGCGTGGG
ATAGTGGAAGACACCTCAGATATGATAACTCGGGCGGAATGAATGCCTCG
TCCATAAAAGCCTCTCATCGCTTTGCCGACAGCCATAACACACATGAAAG
CACTTTTCACTTACAGTTG back to topCoding sequence (CDS) from alignment at CM002467.1:495123..497591+ >rna6070 ID=rna6070|Name=rna6070|organism=Nannochloropsis gaditana|type=CDS|length=1788bp|location=Sequence derived from alignment at CM002467.1:495123..497591+ (Nannochloropsis gaditana)
ATGGGATTACTTGGTGCTCTTGCGGCAGCGCAAGCAGTTTTGAAAATCAG
TTTCTCACATTTACCTCACGCTTTAAGACGACGCTTCAATCGCACATGTC
CCTTGATTGAACAGCTGCCAAGGGTCAAAAGTCCCTTAAGGATGTCGCGT
GACCCACGACTGGGTTCGACACAAGCGTGGTGGACGAATGAGCTAGCTTT
TacattcctcttctttttgaaCCTTCTGAACTACATTGACCGTGGCATCA
TCCCCGGGGCTGCAGAGGAGTTCAGTGACTTCGTTGCTCACTCTCTTGGT
ACTTCAAGCCCGGACTTGTTCGTAGGATTGCTGCAATCCGCATTCATTGT
GGGCTTCTCTCTAGCGGCTATTGTCTTCGGACATGTAATCCACTACGTGG
CTCCTTTCAAGATGGTTGGAGTCGGACTTGTGATCTGGATCATCGCCACA
GCTTTGAGCGGCTTGGCCCACCACGTTGCGTCCTACTATCTGCTCTGCAT
CGCGCGCATGCTCAGCggcgtgggggaggccggTTTCCAGTGCGTGGCCC
CGCCCTTTATCCTGGACCTGGGCGGGGACAGCGGGGGTCGATGGGTCGCC
GTTTTCTACACAGCCATCCCTTTGGGCACGGCGATCGGCTATCCTTGGGG
CGCCTTATTCGCGGGCTCTCCTtggacatgggccgggggcTTCTGGGTAG
CGTCCTTTCTGATGCTTCCGTTCGCTGTGACGTGTTTCCTGCTGCCTTTC
ACCTGGAGGCCCGAACGCGCGCCTATCGAAGGGGATGACGTCCGGACAGA
CGGCGACTTGAAAATTGCTGCCAAGAAAGCATCTAGAGACAAAAATGGGA
CCGACAGCGCTGAACTTCACAGTGTGACAAGACATGACGCTTTGTTGCGA
CACGAGCAGGAGGTTTCTGTTGCTGATGCAGAAGCACAATTTGAAGCCCG
CCATATGTCGCTACTCAGAGAGGCCTGTGTGGTGCTGCGACGGCCAGTAT
TTTTGCTGAATGCTTTTGGTTACGCTGCTAACACGGGGATGATGATTGGA
GCATCGACGTTTTCGAGTAAGATAATGCTGGATTttggctttttttcctc
ggaAAGCAGTGCTTCCAGCGTTTTTGGAATCGCTCTATCGTTGGCTGGGC
TCTTAGGTACGCCCTTAGGGGGGGTCCTTGTAGATCGTCGACATTTCCAT
TCGGAAGAAGCAAAGCTGGTGTTTCTACTGCGTCAAAGTACGATATTTGC
GACGCTGGGTTGTATTTGTTCGTCCCTAAGCTGCTGGATTTATCAGCGCG
AGGTCTTTCTCGTGTTTTTTGTGGCCGGCGCTCTACTCCTCTTTGTCTGC
ACAGCCTCAATCAACATGGTTACCATGCTCTCTGTGCCCCCAGCAAACCG
CTCGTTCGCTATTGGCCTCTGCACACTCATCATGCATGCTTTAGGCGATG
TGCCCTCTCCCATCGTTGTTGGTGCGATCCTTGACACCTTGGCTCCAGAT
TGTGCTGCAGACATGAAGAAAGACGGGAAAGTGTCCCCGGAATGTACGGC
TCAGGTTTCTCAAGTCCGTTTGACGTTATTCATTACGTGCATGTGGCTCT
TGGTTGCGATTTTATGCTGGGGAGTGGGTTATGTTGTGGCCAGGAGAGAA
TATCACAGGCACCACGCGGCGCACCGTTACCTCTATTTGGACTGTGGGTC
TGTcgaaggagaaaagatgaGTCGGTCTGGCGACCGCTCATCTGAGGTCC
CAGACGAACGTAATCAGCCGCTCTTGCGCAAAATATAG back to top
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