rna607, rna607 (mRNA) Nannochloropsis gaditana

Overview
Namerna607
Unique Namerna607
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length717
Alignment locationCM002455.1:1513486..1515211 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100170g11.5471.mrna
Orig protein idgnl|cribi|Naga_100170g11.5471
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1513486..1515211 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100170g11gene583Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna607rna607-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30062.1cds607Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna607 ID=rna607|Name=rna607|organism=Nannochloropsis gaditana|type=mRNA|length=717bp
ATGCGTGTACTCTCTTTCCTTGCTATTATCGGCACTGCCGCTGCCTTCGT
CAAGCCCACCCTCCCTGCTGCTGGGTCTCGCACTCGTGCCGGCGCTCTCC
GCATGAACCTCGCCGAGATCGAGCTGGAGGCGGGCAAGACCTCTCCTTTC
CCCGATGGCTTCGATCCTCTCGGTCTGTCCAAGGATAAGTCATTCAAGGA
GCTCAAGAAGTGGCGCGAGGCGGAGCTCAAGCACGGTATGTCCCTCCACC
CTCCGCGCCGCGTTGCCATGCTTGCCGTCCTGGGCACGGCCGTGCAAGAG
AACTTCCACCCCCTGTGGGGCTTCAACGAGAAGGAGATGGATGGTGCCAT
CTTTCACTTCCAGGAGATCCAAAACGTCTACCCCCTTTTCTGGACCGCCC
TCCTTTTCATCATCGGCATCATTGAGGCTCGCACCATCTCCACCGGATGG
GATGAGAACATGGCCGGATCTTCCCAGATCGCCGGCGTGAAGGAGGACTA
CATCTGCGGGAACCTGGGCCTGGACCCCCTCAAGATCATCGAAAATGACG
ACGAGGAGGCTTTCCTGTCCTACCGCAACAAGGAGCTCAACAACGGCCGT
CTGGCTATGATCGCAGCCGCTGGGATCACCGTCCAGGAGAAGTTCGTCAC
CAACGGCCTCCCCGAGTTCGAGTTCCACCGATTCGCCCTCTCGGACGTCT
ACAACTTCTTCTTCTAA
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protein sequence of rna607

>rna607-protein ID=rna607-protein|Name=rna607|organism=Nannochloropsis gaditana|type=polypeptide|length=235bp
MPPSPPSPRSRIQGDAYEDAGLRSSHGVTKGAARALLRMGVITRREYAQL
LAASALVKQPPSSYPSGLPLSASARVALSSPRAPRREPPRRVCPISLEPV
CAEATGSHSFCFSTLPAEGEGGGQEGGSEKERACVVWYDVRALCSYLIAT
GNFVEPTSRRPIGAKDVEVLASKLLQLGEKEMEEKLCSTFASSARATQWR
EQMDLLEGLDRCVGEVVTEMLRLVEGRSAGKKRGR
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mRNA from alignment at CM002455.1:1513486..1515211-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna607 ID=rna607|Name=rna607|organism=Nannochloropsis gaditana|type=mRNA|length=1726bp|location=Sequence derived from alignment at CM002455.1:1513486..1515211- (Nannochloropsis gaditana)
GAAAAGGAGGAACGTCAAGGGTAACACATAGGACCACCGATAGAGGTTCC
CAGGGTCATTCCCTCGTGTCACATTACGATTTTGCATGCATCTCTCGTAC
GATGCGATGGTTTTGGGGCGATGACCACGCAAGTGTCTGGCTGTTTCCTC
GTGGTCGCGCGGATGCCGAGGATGTCACATACCCCGCCAGCCACTTCCCT
TTCCTTTATTACAGCCTACATGATCTTTAATCCACAAAACACACACCAAT
AAACACTTGAAACCGCACAGGAACTTAAAAGGTTCTACGGACGATGGAAG
CGACGGCGGCGGTGTAGGATACGCTTTCCATCGGTTTTTCATCAGAAGTG
CTTCGTTTTTCATCGACTTCTGTACCGGAATGCGTTATTCTTTTCGAGAA
ATTCCAACATCACGACTTCCAGTACGCCGCAATTTTTTGTAGCATTTGCA
GACATTTTTTCTACCTCTATCATCCTACCTTGCTGCAGCTAGCCTAGATC
TTTAGTTCCGAAGAGTTCCAGACCTCCATCCTTGCATTCCTTTGTTGAAG
TCTCCTTCCCCCCCTCCTAGACATTCTGGACCTTGAATAGCCCTGCCCGA
CGATGCCTCCATCGCCTCCTTCTCCTCGCAGCCGCATCCAGGGCGATGCC
TACGAAGACGCGGGTTTGAGATCATCACACGGCGTGACGAAAGGTGCTGC
CCGGGCCCTTCTCCGCATGGGGGTCATCACTCGCCGCGAATACGCTCAGC
TCTTAGCGGCCTCCGCCCTCGTCAAACAGCCTCCCTCCTCCTACCCGTCG
GGTCTACCCCTCTCTGCTTCGGCCCGTGTTGCCCTATCTTCCCCCCGAGC
CCCCCGGCGGGAACCACCTCGGCGCGTCTGCCCGATCAGCTTGGAGCCCG
TCTGCGCCGAGGCGACAGGAAGCCACTCCTTCTGCTTCTCTACTCTGCCT
GCTGAGGGCGAGGGGGGAGGACAGGAGGGAGGGAGCGAGAAGGAGAGGGC
GTGCGTGGTGTGGTACGACGTTCGGGCGCTTTGCAGCTACTTGATTGCCA
CGGGCAACTTTGTCGAACCCACCAGCCGGCGACCGATCGGCGCGAAGGAC
GTGGAGGTGAGAGGAAAGGAGGGAGGAAGTAGTAAGGGAGGAAGGGGTAA
TGGACGATCCGATCTTGGGTGCACGGGAGTCAGGGAGGGATGGAGGAGCC
CAGCGGTGCCTCCCACCCTCCGGGCTTGTGGCAGGGGAAAGGCAGGGCGA
TGGGGATGTTCAGTCGCGCGACATGCTTGTGTGGCTAACCACCCGCCGGC
TGTTTGGACATGTCACAGGTGTTGGCTAGCAAGCTGCTGCAACTTGGGGA
GAAGGAGATGGAGGAAAAATTGTGCTCGACGTTTGCGTCCTCAGCCAGGT
ATGAGGGAGAAAGGGGAAGAGTGAGAGTCGGAGGGAGGCAGTGAAAAGAG
ACAGCAGAAAAGTGTTGACTTGTGGATAATTGCATTTCAAAAACTTTGCC
GTCTTGTACACTCGCCGCACTCGCTCTCTGACACCTCCCTTCTTCCTCCC
CTTCTTCCCTCCCTCGCTCCTTCCCTCGCTCCCTCCCGCGCCCACTCCCC
AGGGCGACGCAGTGGCGCGAACAGATGGACCTGCTGGAGGGCCTCGATCG
GTGTGTAGGCGAGGTCGTGACGGAGATGCTGCGTTTGGTGGAAGGGAGGA
GCGCAGGTAAGAAGAGAGGGAGATAA
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Coding sequence (CDS) from alignment at CM002455.1:1513486..1515211-

>rna607 ID=rna607|Name=rna607|organism=Nannochloropsis gaditana|type=CDS|length=2124bp|location=Sequence derived from alignment at CM002455.1:1513486..1515211- (Nannochloropsis gaditana)
GGCGACGCAGTGGCGCGAACAGATGGACCTGCTGGAGGGCCTCGATCGGT
GTGTAGGCGAGGTCGTGACGGAGATGCTGCGTTTGGTGGAAGGGAGGAGC
GCAGGTAAGAAGAGAGGGAGATAAGTGTTGGCTAGCAAGCTGCTGCAACT
TGGGGAGAAGGAGATGGAGGAAAAATTGTGCTCGACGTTTGCGTCCTCAG
CCAGATGCCTCCATCGCCTCCTTCTCCTCGCAGCCGCATCCAGGGCGATG
CCTACGAAGACGCGGGTTTGAGATCATCACACGGCGTGACGAAAGGTGCT
GCCCGGGCCCTTCTCCGCATGGGGGTCATCACTCGCCGCGAATACGCTCA
GCTCTTAGCGGCCTCCGCCCTCGTCAAACAGCCTCCCTCCTCCTACCCGT
CGGGTCTACCCCTCTCTGCTTCGGCCCGTGTTGCCCTATCTTCCCCCCGA
GCCCCCCGGCGGGAACCACCTCGGCGCGTCTGCCCGATCAGCTTGGAGCC
CGTCTGCGCCGAGGCGACAGGAAGCCACTCCTTCTGCTTCTCTACTCTGC
CTGCTGAGGGCGAGGGGGGAGGACAGGAGGGAGGGAGCGAGAAGGAGAGG
GCGTGCGTGGTGTGGTACGACGTTCGGGCGCTTTGCAGCTACTTGATTGC
CACGGGCAACTTTGTCGAACCCACCAGCCGGCGACCGATCGGCGCGAAGG
ACGTGGAGGGCGACGCAGTGGCGCGAACAGATGGACCTGCTGGAGGGCCT
CGATCGGTGTGTAGGCGAGGTCGTGACGGAGATGCTGCGTTTGGTGGAAG
GGAGGAGCGCAGGTAAGAAGAGAGGGAGATAAGTGTTGGCTAGCAAGCTG
CTGCAACTTGGGGAGAAGGAGATGGAGGAAAAATTGTGCTCGACGTTTGC
GTCCTCAGCCAGATGCCTCCATCGCCTCCTTCTCCTCGCAGCCGCATCCA
GGGCGATGCCTACGAAGACGCGGGTTTGAGATCATCACACGGCGTGACGA
AAGGTGCTGCCCGGGCCCTTCTCCGCATGGGGGTCATCACTCGCCGCGAA
TACGCTCAGCTCTTAGCGGCCTCCGCCCTCGTCAAACAGCCTCCCTCCTC
CTACCCGTCGGGTCTACCCCTCTCTGCTTCGGCCCGTGTTGCCCTATCTT
CCCCCCGAGCCCCCCGGCGGGAACCACCTCGGCGCGTCTGCCCGATCAGC
TTGGAGCCCGTCTGCGCCGAGGCGACAGGAAGCCACTCCTTCTGCTTCTC
TACTCTGCCTGCTGAGGGCGAGGGGGGAGGACAGGAGGGAGGGAGCGAGA
AGGAGAGGGCGTGCGTGGTGTGGTACGACGTTCGGGCGCTTTGCAGCTAC
TTGATTGCCACGGGCAACTTTGTCGAACCCACCAGCCGGCGACCGATCGG
CGCGAAGGACGTGGAGGGCGACGCAGTGGCGCGAACAGATGGACCTGCTG
GAGGGCCTCGATCGGTGTGTAGGCGAGGTCGTGACGGAGATGCTGCGTTT
GGTGGAAGGGAGGAGCGCAGGTAAGAAGAGAGGGAGATAAGTGTTGGCTA
GCAAGCTGCTGCAACTTGGGGAGAAGGAGATGGAGGAAAAATTGTGCTCG
ACGTTTGCGTCCTCAGCCAGATGCCTCCATCGCCTCCTTCTCCTCGCAGC
CGCATCCAGGGCGATGCCTACGAAGACGCGGGTTTGAGATCATCACACGG
CGTGACGAAAGGTGCTGCCCGGGCCCTTCTCCGCATGGGGGTCATCACTC
GCCGCGAATACGCTCAGCTCTTAGCGGCCTCCGCCCTCGTCAAACAGCCT
CCCTCCTCCTACCCGTCGGGTCTACCCCTCTCTGCTTCGGCCCGTGTTGC
CCTATCTTCCCCCCGAGCCCCCCGGCGGGAACCACCTCGGCGCGTCTGCC
CGATCAGCTTGGAGCCCGTCTGCGCCGAGGCGACAGGAAGCCACTCCTTC
TGCTTCTCTACTCTGCCTGCTGAGGGCGAGGGGGGAGGACAGGAGGGAGG
GAGCGAGAAGGAGAGGGCGTGCGTGGTGTGGTACGACGTTCGGGCGCTTT
GCAGCTACTTGATTGCCACGGGCAACTTTGTCGAACCCACCAGCCGGCGA
CCGATCGGCGCGAAGGACGTGGAG
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Synonyms
Publications