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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100055g8.7323.mrna |
| Orig protein id | gnl|cribi|Naga_100055g8.7323 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:440028..440318 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6047 ID=rna6047|Name=rna6047|organism=Nannochloropsis gaditana|type=mRNA|length=5278bp
TCGCGTAGCACACTGACGGCAAAAAGGTTGACACACAGTGAGATCATGTC
TTCCATGCGCAAACGCAGCTTAAATGGCCAAATTACGCATCATACTGGCC
ACACTCTAAGCTAACCTCCCCGTTGCAAATAGCTATAGGGTAAAGGGAAA
CGCCTGTGGTCAGTAGCATCATGACTCCGCAGCTGTGGCCCCATGATGGG
ATTTCGACCCTGCTTGGTATTGCATTGGTGGTCGATGACGCCAACAAGGG
GCAGAGGTTGGTTTTTCGGTATCCACCATTGCCAAGATTGAGTCCTTACT
CTGCAACCGGCAAATCTACATCAACAAGTTTGGCGCTGTACAGATGCGCG
AAAGACTTCCTCAATTTGACGCCAGAAGTCTTCGCTCGCCTTTTCCGTCC
TAAAAGCGTCCTATGTGGCCATCCTCTGCGTATATCTATCGATCGCGTTC
GTTATTTAAGTTACCCTGTTCTTACGTCGAGTGCCACGAAGGAGATAGCG
ACAGACGATGTCCTGCTTTTCAACGTGATCTTGGCGATGGGACGCACACC
ACCCACAGCCCTGACAAGAGACTCATTGATAGAGCAGTGCTTACCCACAA
TGTCCCGTGCGGCAGCACGGCAAAGATCGGTCGCGTGCAACCACAGTGGC
GAGAGGTCTGTGAAGTTATTACCGACTGCGACGACCTGTGAGCGCCTCGA
TGCGGTAGAAAGGAGTCGGGGTGTCCATCATTTGGAAGATGTACTAGGGC
GTCTTTCGCGTGCTTTGCTGCATGAAGAACGGCGCTGTGGGTATGTAAGC
TTGGAAGTTGGTACGCTTTTGGACATTGCAGAAAGGATGCATGCCAAGGG
CGCCCAGACCATGCTGGACACGATGATGGAGGAAAGCGCTCTCGCAGCTG
ACCTGAAACGGATTTATCACAGTCTTCGGGAGGGCGAAGATGTAGATGTG
ATCATCAATGACTGGCTTCGCCTGAGTATTCCGGGGTCGTTTCCACGGCA
CGACGATCAGGTGGAGGTCGGGAATTCAACGAGTCATACCTCCGGCATAG
GCCCTTTTCAACCCTCACAGACATTGTTGCTGCTCATGGATGAAGAGGAT
ATTTTGACAAAGCTGCCTGAGCGGGGATCACAGAAGCTTCGCGACTTGGT
GAGAGCCGCGAGCCCATTAAAAACACTGGAGGAGACGTCCGCTGCGATCC
ACGTTGACCTTCCGCACATGTACACTCTCGCCGCCCATCTGCAATTCTGG
GGACTGGCTCGGGCTATGCGCACTATTACTTTGGAAAGCGTGTACGCGCT
CCATCCCATGGCTTCTACACAAACGCAATCTATACAATGTATGGCATTTG
AGCAACGCTTTCCCCTATGCTCATTTTTCCGCGTGATCTCGTCTTTTGGA
GGCGGGAAAAGCCTGGAAACTCTTTTGAAGGACTTAGAGCGGGATGCGAG
ACAAGAAAAGCTTGCGCAGATTGTGTGGCTGTTACAGCATGATATCATCC
GAGAAGTGGAGTTGTTGAATTATGCGAGTTCAGATATGTTACCGCTTCCC
GTGTAAGCCAGGCGATTTATCGCTATAGATGGAAGCAAGCAATGGCCCTG
GTGGGCCAGAGCGGTGGGCTTTAAGCTACCGTGAGGAACGATGGTCGTAC
ACACCATGACTTGGTGTTGCATGTATATTTCAGGGTCCTGGCGTGTGAAT
GCATACCTCAGTCACATTAGCTTCGCGGCCATAGAATTCGTCTGTCCACG
CCTCACTGACGCCCTATCGCTAGCTCATCTATTGCTGTGACGTAAACATG
TCGGCAGGGAATCTGTATCTCTCACCCGTCTCCCGGACGATACGCTCACG
CCATTCCAGGCGGTACCCAGGCTGCTCGACATCTGGCAAAAGCTGTTCTG
GATTATCCTTTGTCTTGATGTTTCCATCCATGAATTTGACGAAGAGTTCT
CCGTAAAACCTTCTCCATTCAAGGACAAGGCTCTCAGCGTTCGAGACGCA
GGCCGTGGTCATCATCGCGACCGCCTTGATTTGGTCCTCTCCCCATAATC
GAGTAAATTCCTCATCTATCTCAACTGCCAGCTTCCATTGCTGCGCTTCC
AAGGCGCCTTGCCGCCTTCTGACATCCGGATTAATTATGGCATAACGAGC
ATATGCGAAATTTGCCACCATGTTAAACGCCCAAAATGCCTTTTCAGGCT
CAAAAACAGATATGCTGCCTGGGCCGTAGCTGGGAGGGACAAGCGCCATG
CCGCCATACACAGGAATCATGACTGATGAATCAGTATCATCGACTGCGAA
AAATTGAAGCGCCTTGATGGGATCAGGGACTCCTCTTCGGAGCTGTGCCA
AGAGACTAAACCCCGTCTGTTGTGTCGCCGCGGCGCGCTCATTGAAAAAC
GTGCGCCCATCGTCAAGTTGCCACGTCAAAGGCCGCCAGCGGTAAGGGAG
ACCGAAAGCTTCAGCTCCTACGTCCTGGTCGAAAGCCAGAGGAGTATTTT
CATAATGACTGCGCATGGCATCAACAATGTCCGAAGTACTCAAAGGCGCC
ACAGGTTTGATATAAAGCGGCATTCGTTTCGTCAAGTTTCGCCCTGTTAC
ATAATCGAGGTATGGGCCCATGATCGACTGGTCTGCAGCTGTGGCGCGGC
GGAAAAAATCCCACACGCGGCCCTCACAGGCGCGTGCGGCCAGTGAACGT
CTCCCCCTCTGATGCGTAACCGTACTCGGCCACAAGGTCAGTCATCACTT
GCAATGCTTCCTGTGCGGAGGCTGCTCGCTGAAGAGTAATGTATATAAGC
GAGCCGTAATCCAGAATGGCTCCGGGTTGATGTGCGAGTTCAGCCAGTCC
GCCCCATGTTGATTCCGTGATACACAATCCGAATTCGTTTACGTTTCCCA
CAACGTTGTATGTCAAAGGCACCTATAGCAGTTCGATGGAAAAAATAATA
ACAATTCAAAGGCATCGAAAGCAAAAGTGAGGTCTAAGGGGATCCAGTCC
CGATATTGAAAACAGGGAGCTCATGTCGGGATGGGCAACACACCTGCCTG
ATGACGCCCCGGAACAGCCCCGAGTCCCAATCTGTCACATTTATTACCTC
TCCATCTGAATGACGGCTTCGGGGCCAGAACTGTACCAAGAATGCGGCAA
TTAGTGTCAAAACGTTTCGAGATTATCCTAATATGCCGATACCGTTACCT
GTAAATATCCGTAGAGTGTGTGCGAATCAGCTGCGTACGTGACTTGCATC
GCCCCAACTTGAGAAGCTCCCGGTGTGACAATGAAGCACGTGCAGCTCTC
GCCCATCGATAAAACACACAATAAAGTAAGCGTGAATAGCCCCCCAAAGC
GGAGCAGAGGCATGGTACGAGACCGAGGGATTAACAAAGTGGTTGCTCTG
TGAAAAGTGATAAAGTTTGGAAACATTTCGTAATTATTTCGTGTTTATGC
ACGCATATACCGACCAAGAGGCAGGGAGTCAATCGCCGCCGCAAGTAGTA
TAATTGGTACTGGTGCTTTCCCTCTGTCCCACGTGCTTCATGCTCCCCGT
CTGTGCCAGACTATGTATTACCCACGGGTCACATGCTCCAATCTTTTGAT
GGGCAGCTCGATCGCTTCGTACAAATGCATGCTAAACCATACCTGGTACG
GTTAGGGTCGTCATCGTTGGCGTCACTTTGTGGCAGTCATGCATGGGATG
TGATGGAAATCAATATTGGGGGGGGGGGGGAGGTTTGACCTCTGGCAGTA
AATGAAAAATGCCTGCTTGGGCACGGCACAATATTGCTTTTTTTCCTGGT
CCATAGGCGTAAAGCAAATTGGCAGGTCTTCTTCTGAGAAAACATTTCCT
GGCAAGAAAAGGTTCAGTACTCTTTCTTACGTTTGACATGGAAGACTCGC
GAGTTAAGAAGGAAACGATATATTGTCATTGCTTTTGCAATGTCAGAGTG
CCGAACAATCTCGGTCCAGTTTGGCATTACTCTTATAATTAGCCAAAGAA
AGTCAAGCCTACAAATAATCAAGCTAGATAAAGTTTTATACGAGCGAACA
GGATTACAAGGTTAACATTGACGTTCTCAAGTTAAAGCACAATCAGTCAG
CTAGACTCAACCCAAGCTAGCTTCAACTCAACATCCTAAAAAGACTTCCT
CGGCTTCAAGGATCAGAAATTTTGGCATCGGAAGGTAAAGCCCTGATACA
CAACTCAGGTTTTCTTTTTGCTGTCCTGGCGGCCCATAACCGGACTCCTT
CATTTACACACGTCACCAAAACACTCGCGATTACGCCCCTTTCTTACCGC
CGCCGTCAGAAAACCATCACATCTGAGGTCTAACTGCTGTCGCCTGCTCC
ATCGTTGACTCCGTTGCAATTTGCCCATAGCGTTGAGATGCAACAATACA
GCAGTGAAAAGCCCTCGCGCGATGTTCTTCGTCGCGCACAAGAGAAAGCA
AAATGTTAGCCTCGTTGTACCCAGGATGGGAGAACGGCGTTGCCCGCGCA
GCCGCGGTAGCGAAGTAGGCCGGATTTTTTTCGTCCAATGCAGCGGTAGA
AAGAAGGCGGGCGATGGATTTGAAAAGCTGTTCCAAGCACTCTGGCGCCG
CAAGACCAAATAGGGTGACTCCTGCAAGTTTGTCGTTGGTGTATCCGGTT
ACACGACTGAACTCCTCGTTACACTGCAAAAGCCGGCCATCAATGGAAAC
CACAGCCATGGGAACGTGGGATGAGCGAAAGATCTCAGAAAAATCCAACA
CGATTTCCCGCTGTGATGCAGCCGCCCCGCCGGCAGCGCCGCGACCCCCT
CCCCAGCTGCTAGTGCTTTCGTTATCTTCAGAGGCCGAGCTCACGGACGA
GGAGGACTGTCCTTCAACCCCAATGCCAGCCTTACTGTATTTGCAAAAGC
CAGTCATGGGGGAGCCAGCGCCGCCCCCGCTCAATTTATGTTTGAGATCC
AAGCAATTTTTGCGCTGCCGGAGATGTTGAATGTACTCGTCGCAGGCCGC
CAGGATGTCAAATTTCGACGTTGACCGTAAGGGAAAGTTGCTGTTTTCTA
ATACACCCTTCAAATTGTCAATCTGATCTGTGATTAAATGGGCACGCCGC
TGCTCTCGCTCATTTCTCAGGCGCTTCTTCCTTTCGTCACTCATGCCATC
CTCCTCTTGCATCCCCCTTTCCGAAGTGCCCATAACTTGTGCACCAGATG
TTCCTCGCTTAGCGGCCGACCCAGCACAAAAAGCGTCGCTTGCTGCTGTC
CTGCCGCTTCCCATACCAGATACTCTGA back to topprotein sequence of rna6047 >rna6047-protein ID=rna6047-protein|Name=rna6047|organism=Nannochloropsis gaditana|type=polypeptide|length=72bp
MWSGKVSIPVYEIHGLVGSQMYGKHRSSLHEVKIDIPDGGGQQKENLSCV
SGLYLPMPKFLILEAEEVFLGC back to topmRNA from alignment at CM002467.1:440028..440318+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6047 ID=rna6047|Name=rna6047|organism=Nannochloropsis gaditana|type=mRNA|length=291bp|location=Sequence derived from alignment at CM002467.1:440028..440318+ (Nannochloropsis gaditana)
ATGTGGTCAGGTAAGGTGTCCATTCCTGTGTACGAAATCCACGGCTTAGT
GGGCTCACAGATGTATGGAAAACATCGCAGCTCGCTCCATGAGGTGAAAA
TTGACATACCTGACGGCGGCGGTAAGAAAGGGGCGTAATCGCGAGTGTTT
TGGTGACGTGTGTAAATGAAGGAGTCCGGTTATGGGCCGCCAGGACAGCA
AAAAGAAAACCTGAGTTGTGTATCAGGGCTTTACCTTCCGATGCCAAAAT
TTCTGATCCTTGAAGCCGAGGAAGTCTTTTTAGGATGTTGA back to topCoding sequence (CDS) from alignment at CM002467.1:440028..440318+ >rna6047 ID=rna6047|Name=rna6047|organism=Nannochloropsis gaditana|type=CDS|length=438bp|location=Sequence derived from alignment at CM002467.1:440028..440318+ (Nannochloropsis gaditana)
ATGTGGTCAGGTAAGGTGTCCATTCCTGTGTACGAAATCCACGGCTTAGT
GGGCTCACAGATGTATGGAAAACATCGCAGCTCGCTCCATGAGGTGAAAA
TTGACATACCTGACGGCGGCGGACAGCAAAAAGAAAACCTGAGTTGTGTA
TCAGGGCTTTACCTTCCGATGCCAAAATTTCTGATCCTTGAAGCCGAGGA
AGTCTTTTTAGGATGTTGAATGTGGTCAGGTAAGGTGTCCATTCCTGTGT
ACGAAATCCACGGCTTAGTGGGCTCACAGATGTATGGAAAACATCGCAGC
TCGCTCCATGAGGTGAAAATTGACATACCTGACGGCGGCGGACAGCAAAA
AGAAAACCTGAGTTGTGTATCAGGGCTTTACCTTCCGATGCCAAAATTTC
TGATCCTTGAAGCCGAGGAAGTCTTTTTAGGATGTTGA back to top
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