rna6037, rna6037 (mRNA) Nannochloropsis gaditana

Overview
Namerna6037
Unique Namerna6037
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length483
Alignment locationCM002467.1:424502..425286 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100055g17.7329.mrna
Orig protein idgnl|cribi|Naga_100055g17.7329
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:424502..425286 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100055g17gene5832Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6037rna6037-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24645.1cds6022Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6037 ID=rna6037|Name=rna6037|organism=Nannochloropsis gaditana|type=mRNA|length=483bp
ATGGGCCAAATGCTCGCTCACGGAGCGCGACCCTCCAGCTCGGCCGTGCT
GCAGAGATATCGAGAAATCTTGGATTATTACGCCAATGACTTTCAAAAAA
GTCAGACCGTGCTTCAGCGAAAGCGGGAAACAGCAGAACTGCTTAGTACA
AGAGCAGGAGGAAAGCCGAATACTGGAACGAAGAATGGTGCTGACTGGGG
CAATCCTCAAATGGATCAGTTGTTGCGGGAGAGAAACGCGATTCATAGTT
CACTTCGCGGCGTCGACAGCATACTGAGTCAAGCAATGGAAACGAAAGAC
GGCCTTCGGGCACAGAGGCATTCATTGACAGGGGCGAACAGCGGTCTTGC
GGGTCTGGCTAATAATTTACCGTCTATAAGCCGCGTGGTGGATGCCATCC
AACGAATAAAGACGAGAGACAACATCATCATCGGCCTTCTTACTGCCTGC
TGTCTCTGCTTTACTATTTGGTATCTTGTATGA
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protein sequence of rna6037

>rna6037-protein ID=rna6037-protein|Name=rna6037|organism=Nannochloropsis gaditana|type=polypeptide|length=181bp
MAERVVLFHVFDHILLLRCCNKDILPDVVFLFWAFTVHVLRSPRRHSPGV
RHLCAVDFASITSFGREAVAVQVASVGDTSVVRTSTATATSPADHYLANF
SMADWDELKRKVRGIENKLEGKCQKFSLMAQSSNGDTRHDEENPLLQDSE
ELNIVAEIESLLAAVRDLQSCIDPSNLGYDR
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mRNA from alignment at CM002467.1:424502..425286-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6037 ID=rna6037|Name=rna6037|organism=Nannochloropsis gaditana|type=mRNA|length=785bp|location=Sequence derived from alignment at CM002467.1:424502..425286- (Nannochloropsis gaditana)
ATGGCCGAAAGGGTCGTGCTCTTCCATGTATTTGACCATATCCTACTTCT
ACGTTGTTGTAACAAGGATATTCTGCCTGACGTAGTATTTTTATTCTGGG
CTTTCACCGTACACGTACTCAGATCGCCGAGGCGACATTCACCTGGAGTG
CGCCACCTCTGCGCCGTTGACTTCGCTTCGATCACATCATTCGGGCGCGA
AGCAGTGGCAGTTCAGGTGGCATCGGTGGGGGATACATCAGTGGTAAGAA
GTATTGTGAAGGTGATACATCCTTACGCGAGTCCCCCCCAGCATCCACCG
CCACCGCAACATCTCCTGCAGACCATTACCTCGCAAATTTCTCGATGGCG
GATTGGGACGAGCTGAAACGTAAAGTTCGTGGAATTGAGAATAAGTTGGA
GGTACGTGCCTTTTCAGCTTGTCCACGGACTCGCGGCGCGTATAATTGCT
GCTATTAGGCCTTCAGTCACGAAGCCTTTCGCTTTCTTCCTCATTCGCTA
CAGGGAAAATGCCAGAAATTTTCGTTGATGGCACAGAGTAGCAATGGAGA
CACACGTCATGATGAAGGTGAGGTTTTGGTCGCGTTAAGGTCGCGCTTCC
GGAGATACAGCCAATTGGAGCTCAAGCGATGACCCGGCGCGCACAACTTT
CCAATAACTACAGAAAACCCGCTTTTGCAAGATTCAGAAGAGCTGAACAT
CGTCGCGGAGATCGAAAGTTTGCTTGCGGCGGTAAGAGATTTACAATCAT
GCATAGATCCATCAAATTTGGGGTATGACAGATAA
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Coding sequence (CDS) from alignment at CM002467.1:424502..425286-

>rna6037 ID=rna6037|Name=rna6037|organism=Nannochloropsis gaditana|type=CDS|length=2184bp|location=Sequence derived from alignment at CM002467.1:424502..425286- (Nannochloropsis gaditana)
AAAACCCGCTTTTGCAAGATTCAGAAGAGCTGAACATCGTCGCGGAGATC
GAAAGTTTGCTTGCGGCGGTAAGAGATTTACAATCATGCATAGATCCATC
AAATTTGGGGTATGACAGATAAGGAAAATGCCAGAAATTTTCGTTGATGG
CACAGAGTAGCAATGGAGACACACGTCATGATGAAGCATCCACCGCCACC
GCAACATCTCCTGCAGACCATTACCTCGCAAATTTCTCGATGGCGGATTG
GGACGAGCTGAAACGTAAAGTTCGTGGAATTGAGAATAAGTTGGAGATGG
CCGAAAGGGTCGTGCTCTTCCATGTATTTGACCATATCCTACTTCTACGT
TGTTGTAACAAGGATATTCTGCCTGACGTAGTATTTTTATTCTGGGCTTT
CACCGTACACGTACTCAGATCGCCGAGGCGACATTCACCTGGAGTGCGCC
ACCTCTGCGCCGTTGACTTCGCTTCGATCACATCATTCGGGCGCGAAGCA
GTGGCAGTTCAGGTGGCATCGGTGGGGGATACATCAGTGGTAAGAAAAAA
CCCGCTTTTGCAAGATTCAGAAGAGCTGAACATCGTCGCGGAGATCGAAA
GTTTGCTTGCGGCGGTAAGAGATTTACAATCATGCATAGATCCATCAAAT
TTGGGGTATGACAGATAAGGAAAATGCCAGAAATTTTCGTTGATGGCACA
GAGTAGCAATGGAGACACACGTCATGATGAAGCATCCACCGCCACCGCAA
CATCTCCTGCAGACCATTACCTCGCAAATTTCTCGATGGCGGATTGGGAC
GAGCTGAAACGTAAAGTTCGTGGAATTGAGAATAAGTTGGAGATGGCCGA
AAGGGTCGTGCTCTTCCATGTATTTGACCATATCCTACTTCTACGTTGTT
GTAACAAGGATATTCTGCCTGACGTAGTATTTTTATTCTGGGCTTTCACC
GTACACGTACTCAGATCGCCGAGGCGACATTCACCTGGAGTGCGCCACCT
CTGCGCCGTTGACTTCGCTTCGATCACATCATTCGGGCGCGAAGCAGTGG
CAGTTCAGGTGGCATCGGTGGGGGATACATCAGTGGTAAGAAAAAACCCG
CTTTTGCAAGATTCAGAAGAGCTGAACATCGTCGCGGAGATCGAAAGTTT
GCTTGCGGCGGTAAGAGATTTACAATCATGCATAGATCCATCAAATTTGG
GGTATGACAGATAAGGAAAATGCCAGAAATTTTCGTTGATGGCACAGAGT
AGCAATGGAGACACACGTCATGATGAAGCATCCACCGCCACCGCAACATC
TCCTGCAGACCATTACCTCGCAAATTTCTCGATGGCGGATTGGGACGAGC
TGAAACGTAAAGTTCGTGGAATTGAGAATAAGTTGGAGATGGCCGAAAGG
GTCGTGCTCTTCCATGTATTTGACCATATCCTACTTCTACGTTGTTGTAA
CAAGGATATTCTGCCTGACGTAGTATTTTTATTCTGGGCTTTCACCGTAC
ACGTACTCAGATCGCCGAGGCGACATTCACCTGGAGTGCGCCACCTCTGC
GCCGTTGACTTCGCTTCGATCACATCATTCGGGCGCGAAGCAGTGGCAGT
TCAGGTGGCATCGGTGGGGGATACATCAGTGGTAAGAAAAAACCCGCTTT
TGCAAGATTCAGAAGAGCTGAACATCGTCGCGGAGATCGAAAGTTTGCTT
GCGGCGGTAAGAGATTTACAATCATGCATAGATCCATCAAATTTGGGGTA
TGACAGATAAGGAAAATGCCAGAAATTTTCGTTGATGGCACAGAGTAGCA
ATGGAGACACACGTCATGATGAAGCATCCACCGCCACCGCAACATCTCCT
GCAGACCATTACCTCGCAAATTTCTCGATGGCGGATTGGGACGAGCTGAA
ACGTAAAGTTCGTGGAATTGAGAATAAGTTGGAGATGGCCGAAAGGGTCG
TGCTCTTCCATGTATTTGACCATATCCTACTTCTACGTTGTTGTAACAAG
GATATTCTGCCTGACGTAGTATTTTTATTCTGGGCTTTCACCGTACACGT
ACTCAGATCGCCGAGGCGACATTCACCTGGAGTGCGCCACCTCTGCGCCG
TTGACTTCGCTTCGATCACATCATTCGGGCGCGAAGCAGTGGCAGTTCAG
GTGGCATCGGTGGGGGATACATCAGTGGTAAGAA
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Synonyms
Publications