rna6016, rna6016 (mRNA) Nannochloropsis gaditana

Overview
Namerna6016
Unique Namerna6016
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2466
Alignment locationCM002467.1:369303..370201 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100123g1.6329.mrna
Orig protein idgnl|cribi|Naga_100123g1.6329
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:369303..370201 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100123g1gene5812Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24672.1cds6001Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna6016rna6016-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna6016 ID=rna6016|Name=rna6016|organism=Nannochloropsis gaditana|type=mRNA|length=2466bp
TGTTCCGTGAGCAATATCGGCTTTCTGTACGAATCAAAGAAGCTCCTCTT
TCGGTCACACCAGGCTTTCACGCAAATGCCAATTCAACATGTGCGCAAAA
GCATTCGCCTACTCTGAACCTAACAAAATATAAACCTTTTCATCAAGACA
GGAGCCATTCAATCAATTTATTAGGTAGGCAAGGAGGAAAACGCACAGCT
CCCGAGCACCTTGATTGCGTGCTCCTAGACCTGTCGGAAAATTGGCTTGG
CTGCCTCCTTTGCGGTGCGCGTCGTCGCACTCGACGGCGAACGACACTGT
TCCTATCAATTGTGCGGAGGGATCACTCGATAGTGGAGGGAACCACGTCC
CGTCGGCATCGGTATCATCGTCTTGCCTGCAGCCCCCCGCCCCAGGCATC
TCTTCCTACCTGGAAACTCCCCGTATGGCGGCCTCAAACGCATGGGAAAA
GTATACAATTCCTCCTCCCCAACTGCCTGTGCGAGCTGCTAGTTTGTCGT
CTGTTGCTCCAAACTCACGCCCAGGAAATCCTGCCGCCTCCAATCTCTCT
GTGCGCCCGTCCTGCTTGTCTCTGTCGCTGAGTCTGACCGATGTCGAGAC
ACCCGAGGCGAGCTCCAACGTGGAAGAATCCTTCGACTTCAATGACGAAC
TTGACAACGTTTTCCTCCGCGGCGGGTGCAGGCAAAACCGCGTGGGGCTC
GCCATCGGCGCCGGCGGTCTGGCCATGCGCGACCACCCCAAGACCTTCCG
AGTAGCCTACGAGGACCTGGAGATAGGCAAAGTAATCGGTAAGGGCTCCA
CTGGAGCCGTGCTGGAGGCGGTACACAAGCCGACAGGCACGCGACTGGCT
CTGAAAGTAATCAATGTGTTCGACAAGTCCCGGCGCTCTCAGCTGATCCG
AGAGATCCGGACCCTGTACGACGCCGCCTGCCCGAGTCTTGTCGCGTTCT
ACGGCGCCTTCTACCGGGAGGGCTGCATCACCCTCGCCCTTGAGATGATG
GATGGCGGGGCTCTGGCGAACCTTGTCGCCCAACTCGGCCCCATTCCGGA
GCGCGCGCTGGCCAATATGGTCTTCCAGATCCTATGGGCCTTGGCCTACC
TGAAGCACGACAAGCGGGTGCACCGCGACATCAAGCCCTCCAACCTCCTC
ATCAACAGCCACGGTGAAGTCAAGGTCTCTGACTTTGGCTTGTCTGCCGA
GCTGCAGAGCTCCCTGGCCATGTGCGGCACCTTTGTGGGCACGTTCAAGT
ACATGTCACCGGAGCGCATACGGAACGATCCCTACGACTACGCCTCGGAC
GTGTGGAGCTTGGGGCTGACGCTGATCGAATGTGCCACCGGTCGCTATCC
CTACTTGCAGGGCTTGGACGATGCTGGAATGGAGGAAGAGGAGATGGAGG
CGGTGGACGGAGCGGGTGGCGGGCCTGGGGGGAGAAGAGGGGCGGGGGTG
GCCTCGGCTCCTTCGGCGTCGAAAGGAGGAAGGAGACGCAGGAGTCGCGC
GCACAGCTGCATTGACATGATTCAAGCCATCACAGAAAGTGAGCCGCCCA
CACTCCCTCCCGGCACCGAGTTCTCTCGGGACTTCCATGGCTTTCTGGAC
AACATGCTGCAGAAGGATCCACGTCGGCGGCTCCCGCCCGAGATCCTGCT
GGGAGCGCCCTGGTTGCGACAGTTTGGCGCTGTCTCTCTTGCGGCCGCTG
TTCGCAACACTCAGTACTGGATCCACAACGAGGCGGTGCCGGGGAGGAAT
CGCGTGAAGGCGGGAGGACCGCACAGCCGCCAGGATGAGAGGAGAGGAGG
GCGGGCAGAGGATGAGAGGAGGGCAGAGAGAGGGCAACGAGGACGTGAAA
GCAGCAGTGCCCCTTCTCGTAATCGGGGACTTGTGAATTGCCTTAACAAG
TCGGCCTGCGCAGGAAGCTTTCATGCGGCAGGCGCCCCCCTACCGGCCTC
ATCGGCCCCCCCAATGCCATCCATGGGCTCTCCTGCTTTGTCCAGCGCCA
GCCTTTCTCCATTGGCACCCTCACCACTTTCCACCGACTCTTGTAAGAGC
ATGAACTCGGGAGGGCGACAGACCGGCCTTGCCTTGCCACTGCCGCTCCT
AGCCCGGTCCTCCTCCCTCGTCCCCCCATCGCCTTCTTCCAGCTCTTTCT
CCACGTCCGCGCACTCTTACCACCCTCAGCGCAAGAACGGCCCTCCCATG
CGGTCTTTTTCCACCTGAAGTGAAGCACCACTGGTCTGCCCTGGGGCAAA
GAGAGCATAATTCCAATTAGCGAGAACGGCAATAGCGGTAGAGAATGTTT
GGACAGAAGACGCGCCGTAGCTTACAGATAAGCAGACAGGTGGTAGGAGT
TCCCAACATGTCCGGTGCTCCTCCAGGGGAGATGGGTTTCTCGTATATGA
GGGTGCAGATATGAACCTCTTGTCAATTTATGTAAAGAAATATCATCTCA
GGCACCAGAGAAAAGT
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protein sequence of rna6016

>rna6016-protein ID=rna6016-protein|Name=rna6016|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
MEAAEALLASVRGPGPPPTAKAEPEDDFGGEEQSLRSASQDEGDGGAGTE
GGSMRGARARGGLSSRPLLDNGVPGARARKGSAAGARGEGGAPLGGGRKR
TLGRAGAGEGESDEGSSLTPELCAQGSKRAAEGVSSVPAAAAEEGSGASA
QDGENRHKGGAGKAKRRKR
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mRNA from alignment at CM002467.1:369303..370201-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna6016 ID=rna6016|Name=rna6016|organism=Nannochloropsis gaditana|type=mRNA|length=899bp|location=Sequence derived from alignment at CM002467.1:369303..370201- (Nannochloropsis gaditana)
ATGGAGGCCGCGGAGGCGCTTTTGGCGAGTGTCCGGGGCCCGGGGCCGCC
GCCGACAGCTAAGGCCGAGCCGGAAGATGACTTTGGTGGGGAGGAGCAGT
CGCTGAGGAGCGCGTCTCAGGACGAGGGGGACGGCGGGGCGGGCACAGAG
GGGGGCTCCATGCGAGGGGCCAGGGCGCGGGGGGGACTCTCCTCCAGGCC
CCTTCTGGACAACGGCGTGCCGGGCGCGAGGGCAAGAAAAGGGTCGGCAG
CTGGCGCCCGCGGGGAGGGAGGTGCGCCCCTAGGAGGGGGTCGGAAGCGG
ACGTTGGGCCGCGCGGGGGCGGGAGAGGGGGAGAGCGATGAGGGTTCGTC
GCTAACCCCTGAGCTTTGTGCTCAAGGAAGTAAGCGGGCCGCCGAGGGCG
TGTCCTCGGTGCCTGCTGCGGCGGCGGAGGAGGGCAGTGGGGCCTCGGCT
CAGGACGGAGAGAACAGGCACAAGGGTGGCGCGGGGAAGGCTAAGAGAAG
AAAGCGCTAGGATGGAGGGGGTAGGGAAAAGGAGGGGCGTGGGAAGGACG
GGCTTTGGGCTCGAGGGGCCTCGAGGGCCATCAGGGACATGAGGGAGGGG
GTTCTTCTGACCTTGGATAGCGGTGGTTTAGACAGGAGAGGAACTAGACC
AGTCATATAAAAAGTTAGCGATGCGACTCTCATGCGAGAGGGAGATAAGT
GTTGCCACAGGCGACGCATACACTTTTCTGTGTGGAGACAAAGCATTAGT
AAATTCAGACGAGCGAATTGTAAGTTTTGCGGAGGCTGCGGGCAAGGTGT
CTTCTCTGGTGAGGGTGGGCGAGGGGTGGTACGAGACGAGCGTTGATGCT
TCACGAACGAAAAGCGAGGAAAGGAAGAGCTCACTGACGGCATGGGATA
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Coding sequence (CDS) from alignment at CM002467.1:369303..370201-

>rna6016 ID=rna6016|Name=rna6016|organism=Nannochloropsis gaditana|type=CDS|length=510bp|location=Sequence derived from alignment at CM002467.1:369303..370201- (Nannochloropsis gaditana)
ATGGAGGCCGCGGAGGCGCTTTTGGCGAGTGTCCGGGGCCCGGGGCCGCC
GCCGACAGCTAAGGCCGAGCCGGAAGATGACTTTGGTGGGGAGGAGCAGT
CGCTGAGGAGCGCGTCTCAGGACGAGGGGGACGGCGGGGCGGGCACAGAG
GGGGGCTCCATGCGAGGGGCCAGGGCGCGGGGGGGACTCTCCTCCAGGCC
CCTTCTGGACAACGGCGTGCCGGGCGCGAGGGCAAGAAAAGGGTCGGCAG
CTGGCGCCCGCGGGGAGGGAGGTGCGCCCCTAGGAGGGGGTCGGAAGCGG
ACGTTGGGCCGCGCGGGGGCGGGAGAGGGGGAGAGCGATGAGGGTTCGTC
GCTAACCCCTGAGCTTTGTGCTCAAGGAAGTAAGCGGGCCGCCGAGGGCG
TGTCCTCGGTGCCTGCTGCGGCGGCGGAGGAGGGCAGTGGGGCCTCGGCT
CAGGACGGAGAGAACAGGCACAAGGGTGGCGCGGGGAAGGCTAAGAGAAG
AAAGCGCTAG
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Synonyms
Publications