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Properties
| Property Name | Value |
|---|
| Product | amine oxidase |
| Orig transcript id | gnl|cribi|Naga_100123g5.6334.mrna |
| Orig protein id | gnl|cribi|Naga_100123g5.6334 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:361016..363015 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6012 ID=rna6012|Name=rna6012|organism=Nannochloropsis gaditana|type=mRNA|length=3043bp
TGGCCACAGCCTTGAACGCCATGATACGAGCCTGCAGAGGTCAACATAGG
AATGGTGTGTAGGTCTCGAAGTAGACAGCAAGATCCTCTCGGTCTGAGTG
ACCCTATGGCTCTGCCCGACCATGCCTACAAGAAACTACGACTCTTGCGA
CACGCGTGTTAGCACACGTGCCTCTTACGTCGAACCCTAGCGTCGTCGAC
ACAAGCGCGGCCACAGAGGCCCTCTCCCGTGTGGCAGTGTCTGGGCGTCG
GGGCAGCTTTGCCGACTCGCCCTCTAGCTTCGCTCGCTTTCTTCCGTCAC
GCCCATGCCCATGTCCCTCCGCTTAGGCAGCTTGAGGCCTCCCCCGACAC
CCTCTGGGACTCTGTGCGCCGGCATTTCGTGTCTTGCTTGGCTTTGAAAT
CATTCGCATATCGTGTTTTGATCGTTGATTTCTGTCATTTTCCCCCGTTG
TGCAACAAATGGGATAGCATGCGAGGGGACGTATTCATTCAATCAGTCTG
TGCAACGCCGACTCACGCTGTACGATTACGTAGACAGGTGGAGAACGATG
GCAGTGGTCCTACAAAAAGGATTAGCAACCGCAATGCTGGCGGTGGCGGT
ACTTCCTTTGACGAAAGGTATTTTCTACTTGCCTGGTGTCGCGCCCCGCT
CCTACGAGAAGGGGGAGTCGGTACGGCTCTTTGTGAACAAGCTCACGTCT
ACCAAGACACAAATTCCGTATGACTACTACTCCTTGCCGTTTTGCCACCC
TAGTAAGGTCCAAGGTGAATCCGAAAATCTGGGCGAGGTACTGGTCGGGG
ACCGCATCGAGAAGAACACGCTCTACGAACTCAATTTCAAAGTGCAAGCG
CCTTGTCAGACGGCGTGTCGGGTTCTGTTGGATAAACAAAAGAAAGACAA
ATTCATTAAGGCAATCGATCAGGAATACCGCGCACACTGGATCGTGGACA
ACCTGCCCGTGGCGGTGAAGGCGCACAACGACCTGCGACCGGACGACGCC
TTCTTCATTCGTGGCTTTCCTGTGGGTGGCATACAAGACAAGAAACACTT
TCTCTTCAATCACATCCGACTGATGATCAAGTATCACGAGGAGCGAAACG
ACGTACCGACGGAGGGGGGGGGCGGAATTCGACGCAGCCTTACGTCCCGC
ATCGTGGGCTTCCTGGTGGAGCCCTACAGCGTCCGTCACAAGTACGAGGG
AACCTGGCCGACCGCGGAGGCGGAGGTGAAGAGCATGAAGTACAGCACGT
GCTCGATAGCCGCTCCGGTTACGAACAGACAAGATTCTCTGATGACCCTT
GAAGACAACGACGAAGTGATCTTCACCTACGACGTGGAGTGGATCGAGGA
CAAGGCCACGCCCTGGGCGCACCGCTGGGATCTGTACCTGAAGGGCAATC
CGGACGACAAGATCCACTGGTTCTCCATCACCAACAGCACCATGATCGTC
TTTTTCCTCGCCGGCATGGTGGCCATGATCCTGGTGCGAGCGTTGCACCG
TGACATCAGCCGGTACAACGAGTCGACCGCGGCCGAGGACGCCAAGGAGG
AGTACGGGTGGAAGCTCGTGCACGCCGACGTGTTCCGCCCGCCGCAAACC
ATGCCTATGGTGTTTGCAGCCATGGTCGGCTCCGGCGTCCACCTGCTGGT
CATGACCTTCGTCACGCTGGTCTTTGCCTTGTTGGGCTTCCTCTCCCCCG
CCAACCGGGGCTCTCTTGTTACGGCCTTCGTCCTCCTCTTCGTCTTCCTC
AGCTCCTTCGCGGGCTACGCCTCCTCGCGCATTTATAAGATGTTCCGCGG
GACGGACTTCAAACGCAACACCCTTGTCACAGCGTTCCTCTTCCCCGGAG
TCGTCTTCTCTATCTTCCTCGCCCTCAACGCCGCCGTGGCTGCCCGGGGG
TCCACCCTGGCTCTGCCCGTGGGCTACTTCTTCCTCCTCATTTTCCTGTG
GTTCGGGATCTCTGTGCCTCTTGTCTTTGTCGGCTCTTACTTTGGATACA
AAAAACCTGCGATTGAACACCCTGTCCGCACCAATATCATCGCCCGGGGC
GTTCCTCCTCAGCCCTGGTACATGCACCCGGCGCTGGTGATTATTTTCAG
CGGAATTCTCCCCTTCGGTGCCGTATCCGTTGAGCTATTTTTCATCATGA
CCGCCCTCTGGCTCCACCAGTTTTACTATATCTTTGGGTTCCTCTTCTTG
GCTGTGCTTATCCTGGTGGCCACCTGCGCCGAGATGACCATTGTCATGAC
CTATTTCCAGATCTGCAACGAAGACTACAGGTGGTGGTGGCGCTCCTTCC
TCTGCTCCGGCTCGTGTGCCCTGTACATTTTCTTGTACTCAATCTGGTAC
CTGGCGAAGGAGCTGCAGATAGATGAGAAGGTAGGAATGATGCTCTACTT
CGGGCACATGACTGTCTTCACCTTTACCTTTTTCCTGTTGACCGGCGCTA
TCGGGTTTTATGCAGCCTTTTGGTTCAATCACCGGATATACTCCTCGATC
AAGGTGGATTAGACTGCTGGTGGACGGGAAGGCGTCGAGAGAGGTATGGG
AGAGAGGAAACTCGGACCACGTATTGGACGGGAAAGAAAGCTGGAAAAAA
GTTTTTCTACTCTTGCCAGCATAAAGCGAAGACCGAATGTGTAATTGTCT
TCGTATGGCGTCCTATGATGAAGAATGCAGCCAATATGGAAGATAGCCAA
AAGTGAAGCAGGAAGGAAAAGAGAGGGGGACTTTAGGGACGCTGGGACAC
ATAATCACGGTGCTAGCTGAACCCTGGTTTCTGCAAGAAGACCGTCTTTT
CAAGAAAACTGACAGAGAACAATCGCTCCGATCTTACAATTTAGCGGTGC
TACCGTAAGGTTGAATATTTATCATATAGTCACTGCTCTATGTGCTCACG
TACACAAGATGTGTCCTTGTCCAACGAAGGCATGAGGCCACGAGTGTGAC
CCTCAGAGCTCAGCTAGCGCTAATAAGAGAAATATTTCTTTAGTGTCTGT
CTAGTGCCTAACATGTTATGACCGCAAACATTTGCTTCTCTGC back to topprotein sequence of rna6012 >rna6012-protein ID=rna6012-protein|Name=rna6012|organism=Nannochloropsis gaditana|type=polypeptide|length=582bp
MHRRNFLPPQLLSGLLIASLPGAIFFTVPHRPSIRQALPCSGVLPMAISR
HQSSLFASTTAPSRLKDTLIEEHDVVVIGSGIGGLSCASLCSATYGLDVA
VVESHYHCGGAAHAFEIDGFIFDSGPSLFSGLSQDASPNPLLHVFQAIDE
KVDWLTYNTWGVCLPYGNFAATIGPEPFRDILKTYGGKDAQEQWERFMAL
INPLSEAAMALPPSVLRNDPGVLLTMARFWQAVATTIPKGPQLQQPFSTV
LAEAGVTDPFIRDWLSLLCFLLQGMTEEGTMTAVMAYMLADWYRPNVLLD
YPRGGTGAVIDALVRGVTKTGGKVYTSAHVEEILIEGDRAVGVRLRSGKI
LRARRGVVSNASVWNTARLLPAGLLPEYQERVGRVSQTESFLHLHLGIAA
EGLPGDLQCHYAVVDDFSQPINSPGNVVIISIPSLLDPSLAPTGSHTIHA
YTAGNEPFALWEGLDRQGPDYKRLKEERSEILWRAIEKVIPDVRARIKLS
LAGTPLTHARFLRRDRGTYGPAIRAGKDSYPSANPLPGLHLCGDSVFPGI
GMPAVAASGSIAANNLVSVRQHWKMLDKLRLE back to topmRNA from alignment at CM002467.1:361016..363015- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna6012 ID=rna6012|Name=rna6012|organism=Nannochloropsis gaditana|type=mRNA|length=2000bp|location=Sequence derived from alignment at CM002467.1:361016..363015- (Nannochloropsis gaditana)
GATACAGGACACGAAAACGCAATGCATCGGCGAAATTTCCTACCTCCGCA
GCTTTTGAGCGGCCTACTGATCGCCTCCTTACCTGGAGCGATCTTTTTTA
CCGTCCCTCATCGTCCTTCCATCAGACAAGCCCTACCCTGTTCCGGCGTA
CTGCCCATGGCGATCAGTCGACATCAGTCCAGTCTCTTTGCCAGCACCAC
CGCGCCATCAAGATTGAAAGATACTTTGATTGAAGAACACGATGTGGTTG
TCATTGGATCCGGCATTGGAGGGCTAAGTTGTGCCTCGTTGTGCTCTGCG
ACCTACGGACTGGACGTGGCCGTAGTTGAAAGCCACTACCATTGTGGTGG
AGCCGCACACGCATTTGAAATCGACGGCTTCATTTTTGATTCTGGACCCT
CACTCTTTAGTGGTTTATCACAAGATGCAAGTCCCAATCCTTTGTTACAT
GTCTTCCAAGCTATAGACGAAAAAGTGGATTGGCTAACGTATAATACGTG
GGGCGTTTGTCTACCGTACGGGAACTTTGCCGCCACTATTGGACCCGAGC
CGTTTCGAGACATATTGAAAACATACGGGGGTAAGGATGCTCAGGAGCAA
TGGGAGCGGTTTATGGCTCTCATCAATCCTCTCTCAGAGGCAGCCATGGC
CCTCCCCCCCTCGGTGCTTCGGAACGATCCGGGCGTCTTGCTGACCATGG
CCAGGTTTTGGCAGGCGGTCGCCACCACAATCCCTAAAGGCCCTCAGCTC
CAGCAGCCTTTCTCGACGGTCCTTGCAGAAGCCGGCGTGACCGACCCGTT
CATCCGGGACTGGCTCAGCTTGCTATGCTTCCTGCTGCAAGGTATGACTG
AGGAAGGAACCATGACAGCGGTCATGGCCTACATGCTGGCCGATTGGTAC
CGTCCGAACGTGCTGCTCGACTATCCGCGGGGGGGTACAGGCGCTGTGAT
AGATGCCCTCGTCCGGGGCGTCACGAAGACAGGCGGGAAGGTTTACACCA
GCGCGCACGTGGAAGAGATTCTGATAGAGGGCGATCGCGCGGTGGGGGTG
CGTCTCAGGTCTGGGAAGATCCTGCGGGCTCGCAGAGGCGTGGTGTCCAA
TGCTTCGGTCTGGAACACTGCCCGGCTCCTGCCTGCGGGCCTTTTGCCCG
AATACCAGGAGCGAGTGGGGCGCGTGTCTCAGACAGAGAGCTTCCTTCAC
CTCCACCTCGGAATCGCCGCCGAAGGCCTCCCCGGGGACCTGCAGTGCCA
TTACGCCGTGGTCGATGACTTCTCTCAGCCCATCAACAGCCCAGGGAACG
TCGTCATCATCTCCATCCCTAGCCTTCTAGATCCTTCTCTGGCGCCCACC
GGCTCGCACACCATTCACGCCTACACCGCAGGAAACGAGCCCTTCGCCCT
CTGGGAGGGCCTGGACCGCCAGGGCCCTGACTACAAGCGGCTGAAAGAGG
AGCGGAGCGAGATTTTGTGGCGGGCCATCGAGAAGGTCATCCCCGACGTC
CGTGCGCGCATCAAGCTCTCCTTGGCCGGGACGCCCTTGACGCACGCCCG
CTTCTTGCGACGGGACAGGGGCACCTACGGCCCCGCGATCAGGGCGGGAA
AGGATTCCTACCCCTCTGCTAATCCCCTCCCAGGCCTGCACCTGTGCGGG
GACAGCGTCTTTCCCGGGATAGGTAGGTGGGGAAAAGGCGTCGCTGCGCG
CGTCGGATCGGAGGGGCTTTCTTTACTCATCTCACAAGCGCCCTTGACGC
TATATGCTTGAAGATGCACGCTCACTAACCTGTCTTCAACATCGTTATGG
TCACAGGTATGCCTGCCGTGGCCGCGTCGGGGAGCATTGCCGCCAATAAC
CTGGTCTCGGTGCGACAGCACTGGAAGATGCTTGACAAGCTCAGGTTGGA
GTAGGCGATCAAATAAAAGCTTTCACCTTGCAAAGTAATGAGAGCGACAG
TTCACACGACACGTACACGTTGCGTTCAGATGAACACGCTGTTTTTTTAA
back to topCoding sequence (CDS) from alignment at CM002467.1:361016..363015- >rna6012 ID=rna6012|Name=rna6012|organism=Nannochloropsis gaditana|type=CDS|length=3498bp|location=Sequence derived from alignment at CM002467.1:361016..363015- (Nannochloropsis gaditana)
GTATGCCTGCCGTGGCCGCGTCGGGGAGCATTGCCGCCAATAACCTGGTC
TCGGTGCGACAGCACTGGAAGATGCTTGACAAGCTCAGGTTGGAGTAGAT
GCATCGGCGAAATTTCCTACCTCCGCAGCTTTTGAGCGGCCTACTGATCG
CCTCCTTACCTGGAGCGATCTTTTTTACCGTCCCTCATCGTCCTTCCATC
AGACAAGCCCTACCCTGTTCCGGCGTACTGCCCATGGCGATCAGTCGACA
TCAGTCCAGTCTCTTTGCCAGCACCACCGCGCCATCAAGATTGAAAGATA
CTTTGATTGAAGAACACGATGTGGTTGTCATTGGATCCGGCATTGGAGGG
CTAAGTTGTGCCTCGTTGTGCTCTGCGACCTACGGACTGGACGTGGCCGT
AGTTGAAAGCCACTACCATTGTGGTGGAGCCGCACACGCATTTGAAATCG
ACGGCTTCATTTTTGATTCTGGACCCTCACTCTTTAGTGGTTTATCACAA
GATGCAAGTCCCAATCCTTTGTTACATGTCTTCCAAGCTATAGACGAAAA
AGTGGATTGGCTAACGTATAATACGTGGGGCGTTTGTCTACCGTACGGGA
ACTTTGCCGCCACTATTGGACCCGAGCCGTTTCGAGACATATTGAAAACA
TACGGGGGTAAGGATGCTCAGGAGCAATGGGAGCGGTTTATGGCTCTCAT
CAATCCTCTCTCAGAGGCAGCCATGGCCCTCCCCCCCTCGGTGCTTCGGA
ACGATCCGGGCGTCTTGCTGACCATGGCCAGGTTTTGGCAGGCGGTCGCC
ACCACAATCCCTAAAGGCCCTCAGCTCCAGCAGCCTTTCTCGACGGTCCT
TGCAGAAGCCGGCGTGACCGACCCGTTCATCCGGGACTGGCTCAGCTTGC
TATGCTTCCTGCTGCAAGGTATGACTGAGGAAGGAACCATGACAGCGGTC
ATGGCCTACATGCTGGCCGATTGGTACCGTCCGAACGTGCTGCTCGACTA
TCCGCGGGGGGGTACAGGCGCTGTGATAGATGCCCTCGTCCGGGGCGTCA
CGAAGACAGGCGGGAAGGTTTACACCAGCGCGCACGTGGAAGAGATTCTG
ATAGAGGGCGATCGCGCGGTGGGGGTGCGTCTCAGGTCTGGGAAGATCCT
GCGGGCTCGCAGAGGCGTGGTGTCCAATGCTTCGGTCTGGAACACTGCCC
GGCTCCTGCCTGCGGGCCTTTTGCCCGAATACCAGGAGCGAGTGGGGCGC
GTGTCTCAGACAGAGAGCTTCCTTCACCTCCACCTCGGAATCGCCGCCGA
AGGCCTCCCCGGGGACCTGCAGTGCCATTACGCCGTGGTCGATGACTTCT
CTCAGCCCATCAACAGCCCAGGGAACGTCGTCATCATCTCCATCCCTAGC
CTTCTAGATCCTTCTCTGGCGCCCACCGGCTCGCACACCATTCACGCCTA
CACCGCAGGAAACGAGCCCTTCGCCCTCTGGGAGGGCCTGGACCGCCAGG
GCCCTGACTACAAGCGGCTGAAAGAGGAGCGGAGCGAGATTTTGTGGCGG
GCCATCGAGAAGGTCATCCCCGACGTCCGTGCGCGCATCAAGCTCTCCTT
GGCCGGGACGCCCTTGACGCACGCCCGCTTCTTGCGACGGGACAGGGGCA
CCTACGGCCCCGCGATCAGGGCGGGAAAGGATTCCTACCCCTCTGCTAAT
CCCCTCCCAGGCCTGCACCTGTGCGGGGACAGCGTCTTTCCCGGGATAGG
TATGCCTGCCGTGGCCGCGTCGGGGAGCATTGCCGCCAATAACCTGGTCT
CGGTGCGACAGCACTGGAAGATGCTTGACAAGCTCAGGTTGGAGTAGATG
CATCGGCGAAATTTCCTACCTCCGCAGCTTTTGAGCGGCCTACTGATCGC
CTCCTTACCTGGAGCGATCTTTTTTACCGTCCCTCATCGTCCTTCCATCA
GACAAGCCCTACCCTGTTCCGGCGTACTGCCCATGGCGATCAGTCGACAT
CAGTCCAGTCTCTTTGCCAGCACCACCGCGCCATCAAGATTGAAAGATAC
TTTGATTGAAGAACACGATGTGGTTGTCATTGGATCCGGCATTGGAGGGC
TAAGTTGTGCCTCGTTGTGCTCTGCGACCTACGGACTGGACGTGGCCGTA
GTTGAAAGCCACTACCATTGTGGTGGAGCCGCACACGCATTTGAAATCGA
CGGCTTCATTTTTGATTCTGGACCCTCACTCTTTAGTGGTTTATCACAAG
ATGCAAGTCCCAATCCTTTGTTACATGTCTTCCAAGCTATAGACGAAAAA
GTGGATTGGCTAACGTATAATACGTGGGGCGTTTGTCTACCGTACGGGAA
CTTTGCCGCCACTATTGGACCCGAGCCGTTTCGAGACATATTGAAAACAT
ACGGGGGTAAGGATGCTCAGGAGCAATGGGAGCGGTTTATGGCTCTCATC
AATCCTCTCTCAGAGGCAGCCATGGCCCTCCCCCCCTCGGTGCTTCGGAA
CGATCCGGGCGTCTTGCTGACCATGGCCAGGTTTTGGCAGGCGGTCGCCA
CCACAATCCCTAAAGGCCCTCAGCTCCAGCAGCCTTTCTCGACGGTCCTT
GCAGAAGCCGGCGTGACCGACCCGTTCATCCGGGACTGGCTCAGCTTGCT
ATGCTTCCTGCTGCAAGGTATGACTGAGGAAGGAACCATGACAGCGGTCA
TGGCCTACATGCTGGCCGATTGGTACCGTCCGAACGTGCTGCTCGACTAT
CCGCGGGGGGGTACAGGCGCTGTGATAGATGCCCTCGTCCGGGGCGTCAC
GAAGACAGGCGGGAAGGTTTACACCAGCGCGCACGTGGAAGAGATTCTGA
TAGAGGGCGATCGCGCGGTGGGGGTGCGTCTCAGGTCTGGGAAGATCCTG
CGGGCTCGCAGAGGCGTGGTGTCCAATGCTTCGGTCTGGAACACTGCCCG
GCTCCTGCCTGCGGGCCTTTTGCCCGAATACCAGGAGCGAGTGGGGCGCG
TGTCTCAGACAGAGAGCTTCCTTCACCTCCACCTCGGAATCGCCGCCGAA
GGCCTCCCCGGGGACCTGCAGTGCCATTACGCCGTGGTCGATGACTTCTC
TCAGCCCATCAACAGCCCAGGGAACGTCGTCATCATCTCCATCCCTAGCC
TTCTAGATCCTTCTCTGGCGCCCACCGGCTCGCACACCATTCACGCCTAC
ACCGCAGGAAACGAGCCCTTCGCCCTCTGGGAGGGCCTGGACCGCCAGGG
CCCTGACTACAAGCGGCTGAAAGAGGAGCGGAGCGAGATTTTGTGGCGGG
CCATCGAGAAGGTCATCCCCGACGTCCGTGCGCGCATCAAGCTCTCCTTG
GCCGGGACGCCCTTGACGCACGCCCGCTTCTTGCGACGGGACAGGGGCAC
CTACGGCCCCGCGATCAGGGCGGGAAAGGATTCCTACCCCTCTGCTAATC
CCCTCCCAGGCCTGCACCTGTGCGGGGACAGCGTCTTTCCCGGGATAG back to top
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