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Properties
| Property Name | Value |
|---|
| Product | transmembrane 9 superfamily member 4 |
| Orig transcript id | gnl|cribi|Naga_100123g7.6343.mrna |
| Orig protein id | gnl|cribi|Naga_100123g7.6343 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:357095..360137 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna6011 ID=rna6011|Name=rna6011|organism=Nannochloropsis gaditana|type=mRNA|length=4452bp
GCGCCGCAGCCATCTTCATCGTTACGCTGCCGTGAGGGTAGATGCGTGAC
CCTCCATGTAGGGGTGGTCACAGCCCTAACCCCGCCCCAACAAGTCATTT
ACACCTTCTATTTAATACAAATTCCAAAACTCTTGCACCCGTTTACAGGA
TCGACGGTGTCTGCCATCTGCGGCCCGCTGCACGGCTTCTATGCTGTTAT
TTATGCCCGGTCTTCGCTTCAATAGTCCGACAGCGCTTGTCAATCAAAAC
GTGATCGAATAGCCATACTTTACGATTAATGGAAGCATGACAGAAACATC
GGACTCCTGGGAAGACGATGGGTGGGGCGCTTGCGCTGCGAATAAAATAG
ACGAGGATGACGAAGAAGACACGGCGGAGGGGCTGGGACAAGTAGAGCCT
TCCATTCGAGGAACAGCCTTAATCGATTTGAATGCGAAGGGGCGCATATT
TTCAAAAGTATGGAACGCAGACCATTCTGAAAATGGTTTACGAGTAATGT
TTTTGGGAGGAAAATTAATTAACTGTACGGTCGATCGACATAAACTAGCT
GGAAATAAGGTTATGCGTTTTGTAACCAAGATTGCGAGCAACGCGCCCAC
AAAAGGCCGTGAAAAGCGACAGATGATAATAGCTATTTCAACGGAATCTG
TAGCTGAAAAAGTCGCGACAGGAAGGGACGATGACTTAGTCGAGATCGGA
AGAACAGACAAGTCTTACGATGACCCCGACTCTATATTTGCCATTCCCGT
ACGAGTTGCGTGCCGGAAGGATATGAGTTGCACAGTGCGTGTCCAAGTCA
CCTGCGCACAAAGCAACCTCGGAGTCGGAGGTGAAGCCGCTTTGCTGGGA
CAGTACATAGCAAAATTTTCTGATATTTGGAACGCTACAAGCGGTGGTAC
ACCTCTAGTCTTTCCGATGACATCGCCAGCATGTCCGAGAGGAAGTCGAG
CAATTTTATGGCGCCTGCCATTTTCAAGTCTTTGCCCACCTTGCTCCCCA
TTTATTGAATTAAAAGCGCGGCGGCATCTGTCTTACTCTGTGCCCTACCT
TTTCTGGCGACCGGAGAGAGGGGAATGTCCTGGGGTGGGGGCCCAAAAAG
CGCGATATCACTTACGACCACACGCCCGTGAATATGCCGAGAGCGACTTG
GAAGGGCCCGAATTCGTCAACCTGGTCATGGCACGCGAGACAACGCTGGA
AAGTCGCTTCCCTTACCTCTTAGCGACCCTTATATGCCGCCCGTTTTTGG
AGAGGATGGAACGTGCTGTCGAGGGATGGAGGCTACGTTTGGAGCATGAA
CGCATCCGCCAGGGATTTTTTTCTTCGCACGCCGAGGCTTTGAAATCTGG
ACAAATGCTTGTCCGGCTTACGGTCGTTGCAGCCGAAGACTTGCCTTTGT
CTTCGGAGGGGAGCCCTGAGACGGACTACGGTGGCCTGAAGGTTCAACCT
CTCAAGGGCGACGGCGTCAGGCTACCAAATATGTCGCAACGAACGCAAAA
GCTTGTTGCCTTACGGGGAAATAAGCGAACACAAGCTGAAGATAGCCCAG
TGCGATGCCATCCATTCGTCGCGGTAACTTTGGAAAAGCCGCCCCCCCAG
GTGGGTCTGTTGATCGGGCACACGAACACGGAGTACGCCACACGTCACCC
CGCCTTTGGGACCAACACCAACAAGAGACTCTGCCCCCACAATGGCCGCC
CCAGAGAGAGCTTCTCGCCCCATGGTGCCGCCCGCATTCAACCACCGCCT
CCCTCCTCTGCCTCGGTACAAGCACCGGCCTTCCTTTTCTACACGCACGC
GGATGACCCGGAGCGGGGCGCCCTGCGACTTGAAGTTTTTCAAGAATCGG
ACAGATCTCCCTCCTGCGCCTCCTTTACAGCATCGACAAGGCTCTCTCTT
GAGTCCAACTTCAGAAGAGCGGACAAGGCGCTACCGATTGAAGAAGATGC
GGAGGTGCGCTTGCTCCTGTCGGACAAGGCAGGGAGACCCGCCGGAAGGC
TTTTGGTGCGTATGGCAATATTTGCTGCCGGTGGTACAAATACTATGGCA
GCAGCGACAAGTAAATCTACAGGGACACAAAAGGCCTTAGGTGTGTTTGA
GTCACCTCTTAAGCCTCGCACGGGTGAAACGTCAGGTTTTTCTGCTCAGA
TCTCACCCCTGGAAGCCGCCGAGGAGGCATGCTATTCCTGGATGTGGCAT
GCGGGATTCTCCGGGCTTGCCCCTCGGAAAGGTGACTTTTTGACGCAATT
TGCCGAGCAGAAGGCCGCCAGCGCAGGCGGCACGAGTGTAGTGCGCCTCA
GGTACCCCGTGGATTGGATCGAAGGTCATATTGCGTCTCTTACCCAGGAT
CTATCGGTGCTGCAGGACTCATTGCTGCTGTGGCAACGAGCCGTTGACGA
TGGGCGAGGATTTCGAAGCTCGGAGCACAAGATGACGAAGGATCTTCAAG
GCGTGCCCACCAACGTGCACTCGCAGACTTTTGTAGTCGCGGATCTGAAC
CCTCAGACCCACGGCTCTTCTTCTTCTTCAGCTGTAGGGTGTGTGCCCTT
TTCTACCTCTCCTTCGCTTTCTCGAGATCCAGCTCTTCAGGACTTATTTC
CAAGTCTTTCCACTCATGATGTCCCCCACACGGCCCCTGCACCGCAAGCC
GTTCCCCCCACGCGTTTCTATTACGACGTTGTCTCTGCGGGCGCGCCAAC
AGCCCACGCCCTGGGCTATCGGCGCGGTGGTCTCCTTTCCCACCACCTTG
AGATGGACATTCTCCAGAAAGATATCGATGCCCTGGACCAGTCTCTCAAA
CCATTTTATCCGTCTCTCCAACCCACCGGGGAGACGGGCCTGCTGTGTGA
CGAACTCCTCCTCAAGCTCCTCCGGTTCGAAGCTCTGGCGGCCAAGACAG
CGATGCGTCGCATCCTGGTCCTGTCCCAAGCCCTGGGAATTGCTACAACG
TCTATTGCTACCAAGCTGGACATAATGCTCGCGGAAGACGCTGATCTGAC
GCTGAGTGCGCGCACGGCTGAGAATATGTGCAGGGCGGGCTTCCTAATTT
GCTTTCAGGGATTGATCTCCACGATCGGGAAGGAGCACGGTATGCTCGAG
GACGTGGCTATGGCAGTGGAGATGGCTTCTACCTTTAGCTTTGAAATCTG
CCCTAAACCACGCTGTTCCCTCCCACCCACTGGCGCCCGACCTCAACCAC
CAGGCCCAACAAATGCTTCTCCGCCCCCCAGACCTTCACCCCACGAGAAC
CAGGATGTGCTGATTGATCTGGATATACCTTCTTTCCCTTCCTCTCCCAC
ATTGGCTTGCACAGCGTATCCGTCCGTATCTCGCACGCCCATGGAGGACT
TGCCGCAATCGCCGAAATCGTTCAGGGATGGTGGTACAACTGCTTCTCAG
AGCGGTCGGACACCGCCCGCTGCCATGGACGTAGAGTTCGATCATTCCCG
AAGACACATCCGCCTTTTATTGCACAAAGATGCCTATGAGCGCCTTCCTA
GTTGCCTTGGACGTGTTGGGCGAGAGCAGACAAACCAGTCGGGGCAACAA
CATCATCAGTCTGGGGTAGTGGTTCCGATCGTGGCGACGCTTTTTACGCA
AGGAATAGATGCAAAGCAATCTTTGGCAAATCTTTCTAATCAACTAAAAA
AGGAGGCGAAGGAGGATACTACCGCAGAGCAAGGAGGGGCACGCATCAAG
AATACTTCTTCAAAGGCTGCTTCTGCCAAAGTCGGGGGCGACTCGACAAT
TCAGCCTCTGATCAATCGGCGTTCTGCGCGCATCCTGAACGATTATTGCC
ATCGATGCCACCCTGTGCTGCCTCCTGGAAAGTATAATCTCTTTGATCGC
TTGACCGAGCGCATCGATGTGGGTCGCAGTAGCTTAGTTTTTGATCCTGC
GGAGGATTTTGCCCGGTCCCTGAGCGATATTTCTGTACATCCGCTTTGCG
AGGGTCTGATGGAGGCCTTAACGCGGGAAAACGGGATGCATAAAAATGTT
GACTTATTGAGAGAGCAGGAGCGGATGGTTTTGGAGGTTGGGGGCGGGCA
AGTTATTTTTTGCAAGTCGGGAAAAGACCGCACGGGTATGGCAATAACGC
TCTTCCAAGCACGGCTCTTAGCGCGGCATGGATGCGAAGGACTCGGCACC
GACGGCTTAATACGCAATGCGAACATTATGCGCATCCATGGCACGCGTCT
ACTGATATGCGATAAAAATGTAGGACGACTGAAATTTGCCTTCAACGGTC
TGCAACTTCAATTCATGCCTCTACTATATAAGCCCCCCCTGGAGACCGTG
GAGCATTTGATAGTTTCGATCATAAACAGAGATATAACTTGATCATCTTG
ATAGACTATAAAAATAAAGTGTTTGGGCATTTCGTTTTTGGAAAAATATC
GACTGTACGTCTTTGATTTACAATATATTATGAAATCCAGAGCGAAGTCC
AA back to topprotein sequence of rna6011 >rna6011-protein ID=rna6011-protein|Name=rna6011|organism=Nannochloropsis gaditana|type=polypeptide|length=654bp
MAVVLQKGLATAMLAVAVLPLTKGIFYLPGVAPRSYEKGESVRLFVNKLT
STKTQIPYDYYSLPFCHPSKVQGESENLGEVLVGDRIEKNTLYELNFKVQ
APCQTACRVLLDKQKKDKFIKAIDQEYRAHWIVDNLPVAVKAHNDLRPDD
AFFIRGFPVGGIQDKKHFLFNHIRLMIKYHEERNDVPTEGGGGIRRSLTS
RIVGFLVEPYSVRHKYEGTWPTAEAEVKSMKYSTCSIAAPVTNRQDSLMT
LEDNDEVIFTYDVEWIEDKATPWAHRWDLYLKGNPDDKIHWFSITNSTMI
VFFLAGMVAMILVRALHRDISRYNESTAAEDAKEEYGWKLVHADVFRPPQ
TMPMVFAAMVGSGVHLLVMTFVTLVFALLGFLSPANRGSLVTAFVLLFVF
LSSFAGYASSRIYKMFRGTDFKRNTLVTAFLFPGVVFSIFLALNAAVAAR
GSTLALPVGYFFLLIFLWFGISVPLVFVGSYFGYKKPAIEHPVRTNIIAR
GVPPQPWYMHPALVIIFSGILPFGAVSVELFFIMTALWLHQFYYIFGFLF
LAVLILVATCAEMTIVMTYFQICNEDYRWWWRSFLCSGSCALYIFLYSIW
YLAKELQIDEKVGMMLYFGHMTVFTFTFFLLTGAIGFYAAFWFNHRIYSS
IKVD back to topmRNA from alignment at CM002467.1:357095..360137- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna6011 ID=rna6011|Name=rna6011|organism=Nannochloropsis gaditana|type=mRNA|length=3043bp|location=Sequence derived from alignment at CM002467.1:357095..360137- (Nannochloropsis gaditana)
TGGCCACAGCCTTGAACGCCATGATACGAGCCTGCAGAGGTCAACATAGG
AATGGTGTGTAGGTCTCGAAGTAGACAGCAAGATCCTCTCGGTCTGAGTG
ACCCTATGGCTCTGCCCGACCATGCCTACAAGAAACTACGACTCTTGCGA
CACGCGTGTTAGCACACGTGCCTCTTACGTCGAACCCTAGCGTCGTCGAC
ACAAGCGCGGCCACAGAGGCCCTCTCCCGTGTGGCAGTGTCTGGGCGTCG
GGGCAGCTTTGCCGACTCGCCCTCTAGCTTCGCTCGCTTTCTTCCGTCAC
GCCCATGCCCATGTCCCTCCGCTTAGGCAGCTTGAGGCCTCCCCCGACAC
CCTCTGGGACTCTGTGCGCCGGCATTTCGTGTCTTGCTTGGCTTTGAAAT
CATTCGCATATCGTGTTTTGATCGTTGATTTCTGTCATTTTCCCCCGTTG
TGCAACAAATGGGATAGCATGCGAGGGGACGTATTCATTCAATCAGTCTG
TGCAACGCCGACTCACGCTGTACGATTACGTAGACAGGTGGAGAACGATG
GCAGTGGTCCTACAAAAAGGATTAGCAACCGCAATGCTGGCGGTGGCGGT
ACTTCCTTTGACGAAAGGTATTTTCTACTTGCCTGGTGTCGCGCCCCGCT
CCTACGAGAAGGGGGAGTCGGTACGGCTCTTTGTGAACAAGCTCACGTCT
ACCAAGACACAAATTCCGTATGACTACTACTCCTTGCCGTTTTGCCACCC
TAGTAAGGTCCAAGGTGAATCCGAAAATCTGGGCGAGGTACTGGTCGGGG
ACCGCATCGAGAAGAACACGCTCTACGAACTCAATTTCAAAGTGCAAGCG
CCTTGTCAGACGGCGTGTCGGGTTCTGTTGGATAAACAAAAGAAAGACAA
ATTCATTAAGGCAATCGATCAGGAATACCGCGCACACTGGATCGTGGACA
ACCTGCCCGTGGCGGTGAAGGCGCACAACGACCTGCGACCGGACGACGCC
TTCTTCATTCGTGGCTTTCCTGTGGGTGGCATACAAGACAAGAAACACTT
TCTCTTCAATCACATCCGACTGATGATCAAGTATCACGAGGAGCGAAACG
ACGTACCGACGGAGGGGGGGGGCGGAATTCGACGCAGCCTTACGTCCCGC
ATCGTGGGCTTCCTGGTGGAGCCCTACAGCGTCCGTCACAAGTACGAGGG
AACCTGGCCGACCGCGGAGGCGGAGGTGAAGAGCATGAAGTACAGCACGT
GCTCGATAGCCGCTCCGGTTACGAACAGACAAGATTCTCTGATGACCCTT
GAAGACAACGACGAAGTGATCTTCACCTACGACGTGGAGTGGATCGAGGA
CAAGGCCACGCCCTGGGCGCACCGCTGGGATCTGTACCTGAAGGGCAATC
CGGACGACAAGATCCACTGGTTCTCCATCACCAACAGCACCATGATCGTC
TTTTTCCTCGCCGGCATGGTGGCCATGATCCTGGTGCGAGCGTTGCACCG
TGACATCAGCCGGTACAACGAGTCGACCGCGGCCGAGGACGCCAAGGAGG
AGTACGGGTGGAAGCTCGTGCACGCCGACGTGTTCCGCCCGCCGCAAACC
ATGCCTATGGTGTTTGCAGCCATGGTCGGCTCCGGCGTCCACCTGCTGGT
CATGACCTTCGTCACGCTGGTCTTTGCCTTGTTGGGCTTCCTCTCCCCCG
CCAACCGGGGCTCTCTTGTTACGGCCTTCGTCCTCCTCTTCGTCTTCCTC
AGCTCCTTCGCGGGCTACGCCTCCTCGCGCATTTATAAGATGTTCCGCGG
GACGGACTTCAAACGCAACACCCTTGTCACAGCGTTCCTCTTCCCCGGAG
TCGTCTTCTCTATCTTCCTCGCCCTCAACGCCGCCGTGGCTGCCCGGGGG
TCCACCCTGGCTCTGCCCGTGGGCTACTTCTTCCTCCTCATTTTCCTGTG
GTTCGGGATCTCTGTGCCTCTTGTCTTTGTCGGCTCTTACTTTGGATACA
AAAAACCTGCGATTGAACACCCTGTCCGCACCAATATCATCGCCCGGGGC
GTTCCTCCTCAGCCCTGGTACATGCACCCGGCGCTGGTGATTATTTTCAG
CGGAATTCTCCCCTTCGGTGCCGTATCCGTTGAGCTATTTTTCATCATGA
CCGCCCTCTGGCTCCACCAGTTTTACTATATCTTTGGGTTCCTCTTCTTG
GCTGTGCTTATCCTGGTGGCCACCTGCGCCGAGATGACCATTGTCATGAC
CTATTTCCAGATCTGCAACGAAGACTACAGGTGGTGGTGGCGCTCCTTCC
TCTGCTCCGGCTCGTGTGCCCTGTACATTTTCTTGTACTCAATCTGGTAC
CTGGCGAAGGAGCTGCAGATAGATGAGAAGGTAGGAATGATGCTCTACTT
CGGGCACATGACTGTCTTCACCTTTACCTTTTTCCTGTTGACCGGCGCTA
TCGGGTTTTATGCAGCCTTTTGGTTCAATCACCGGATATACTCCTCGATC
AAGGTGGATTAGACTGCTGGTGGACGGGAAGGCGTCGAGAGAGGTATGGG
AGAGAGGAAACTCGGACCACGTATTGGACGGGAAAGAAAGCTGGAAAAAA
GTTTTTCTACTCTTGCCAGCATAAAGCGAAGACCGAATGTGTAATTGTCT
TCGTATGGCGTCCTATGATGAAGAATGCAGCCAATATGGAAGATAGCCAA
AAGTGAAGCAGGAAGGAAAAGAGAGGGGGACTTTAGGGACGCTGGGACAC
ATAATCACGGTGCTAGCTGAACCCTGGTTTCTGCAAGAAGACCGTCTTTT
CAAGAAAACTGACAGAGAACAATCGCTCCGATCTTACAATTTAGCGGTGC
TACCGTAAGGTTGAATATTTATCATATAGTCACTGCTCTATGTGCTCACG
TACACAAGATGTGTCCTTGTCCAACGAAGGCATGAGGCCACGAGTGTGAC
CCTCAGAGCTCAGCTAGCGCTAATAAGAGAAATATTTCTTTAGTGTCTGT
CTAGTGCCTAACATGTTATGACCGCAAACATTTGCTTCTCTGC back to topCoding sequence (CDS) from alignment at CM002467.1:357095..360137- >rna6011 ID=rna6011|Name=rna6011|organism=Nannochloropsis gaditana|type=CDS|length=1965bp|location=Sequence derived from alignment at CM002467.1:357095..360137- (Nannochloropsis gaditana)
ATGGCAGTGGTCCTACAAAAAGGATTAGCAACCGCAATGCTGGCGGTGGC
GGTACTTCCTTTGACGAAAGGTATTTTCTACTTGCCTGGTGTCGCGCCCC
GCTCCTACGAGAAGGGGGAGTCGGTACGGCTCTTTGTGAACAAGCTCACG
TCTACCAAGACACAAATTCCGTATGACTACTACTCCTTGCCGTTTTGCCA
CCCTAGTAAGGTCCAAGGTGAATCCGAAAATCTGGGCGAGGTACTGGTCG
GGGACCGCATCGAGAAGAACACGCTCTACGAACTCAATTTCAAAGTGCAA
GCGCCTTGTCAGACGGCGTGTCGGGTTCTGTTGGATAAACAAAAGAAAGA
CAAATTCATTAAGGCAATCGATCAGGAATACCGCGCACACTGGATCGTGG
ACAACCTGCCCGTGGCGGTGAAGGCGCACAACGACCTGCGACCGGACGAC
GCCTTCTTCATTCGTGGCTTTCCTGTGGGTGGCATACAAGACAAGAAACA
CTTTCTCTTCAATCACATCCGACTGATGATCAAGTATCACGAGGAGCGAA
ACGACGTACCGACGGAGGGGGGGGGCGGAATTCGACGCAGCCTTACGTCC
CGCATCGTGGGCTTCCTGGTGGAGCCCTACAGCGTCCGTCACAAGTACGA
GGGAACCTGGCCGACCGCGGAGGCGGAGGTGAAGAGCATGAAGTACAGCA
CGTGCTCGATAGCCGCTCCGGTTACGAACAGACAAGATTCTCTGATGACC
CTTGAAGACAACGACGAAGTGATCTTCACCTACGACGTGGAGTGGATCGA
GGACAAGGCCACGCCCTGGGCGCACCGCTGGGATCTGTACCTGAAGGGCA
ATCCGGACGACAAGATCCACTGGTTCTCCATCACCAACAGCACCATGATC
GTCTTTTTCCTCGCCGGCATGGTGGCCATGATCCTGGTGCGAGCGTTGCA
CCGTGACATCAGCCGGTACAACGAGTCGACCGCGGCCGAGGACGCCAAGG
AGGAGTACGGGTGGAAGCTCGTGCACGCCGACGTGTTCCGCCCGCCGCAA
ACCATGCCTATGGTGTTTGCAGCCATGGTCGGCTCCGGCGTCCACCTGCT
GGTCATGACCTTCGTCACGCTGGTCTTTGCCTTGTTGGGCTTCCTCTCCC
CCGCCAACCGGGGCTCTCTTGTTACGGCCTTCGTCCTCCTCTTCGTCTTC
CTCAGCTCCTTCGCGGGCTACGCCTCCTCGCGCATTTATAAGATGTTCCG
CGGGACGGACTTCAAACGCAACACCCTTGTCACAGCGTTCCTCTTCCCCG
GAGTCGTCTTCTCTATCTTCCTCGCCCTCAACGCCGCCGTGGCTGCCCGG
GGGTCCACCCTGGCTCTGCCCGTGGGCTACTTCTTCCTCCTCATTTTCCT
GTGGTTCGGGATCTCTGTGCCTCTTGTCTTTGTCGGCTCTTACTTTGGAT
ACAAAAAACCTGCGATTGAACACCCTGTCCGCACCAATATCATCGCCCGG
GGCGTTCCTCCTCAGCCCTGGTACATGCACCCGGCGCTGGTGATTATTTT
CAGCGGAATTCTCCCCTTCGGTGCCGTATCCGTTGAGCTATTTTTCATCA
TGACCGCCCTCTGGCTCCACCAGTTTTACTATATCTTTGGGTTCCTCTTC
TTGGCTGTGCTTATCCTGGTGGCCACCTGCGCCGAGATGACCATTGTCAT
GACCTATTTCCAGATCTGCAACGAAGACTACAGGTGGTGGTGGCGCTCCT
TCCTCTGCTCCGGCTCGTGTGCCCTGTACATTTTCTTGTACTCAATCTGG
TACCTGGCGAAGGAGCTGCAGATAGATGAGAAGGTAGGAATGATGCTCTA
CTTCGGGCACATGACTGTCTTCACCTTTACCTTTTTCCTGTTGACCGGCG
CTATCGGGTTTTATGCAGCCTTTTGGTTCAATCACCGGATATACTCCTCG
ATCAAGGTGGATTAG back to top
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