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Properties
| Property Name | Value |
|---|
| Product | Major facilitator superfamily domain, general substrate transporter |
| Orig transcript id | gnl|cribi|Naga_100076g12.8818.mrna |
| Orig protein id | gnl|cribi|Naga_100076g12.8818 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:294757..297685 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5987 ID=rna5987|Name=rna5987|organism=Nannochloropsis gaditana|type=mRNA|length=2351bp
AAATTTAAGTTTTTCCATATTCCTTCCTCCATCTTTATGCTCAAATGTCT
CCAGATCTTTTCGACTACATTGACGAAAGGGGGGATGCTCGCCTCCCGGT
GCCTGATTGCCAGACCCTAGCGCGTGCAGTGCTGAATGCGATTCACTACT
GCCACGCGCGAGGAGTGTGCCACCGGGATCTCAAGCCTGAGAACATATTG
CTGAAAACAGCCCACGACGAAAGCGAGGGGCGAGGGGAAATGAAGGAGCA
GGGCGGCGGGAGAGGGAGCGGGCTCGCACAGAGCCCCTCCGGTGGGGAAG
AGAGGTCGAGGCAGGAGCAGAGCCCCTCCGGTGGGGAAGACAGGTCGAGG
CAGGAGCAGGAACAGGGACAAGCTTCCAGCCAAGGCAGCCAGAAGGCGCC
GAGCCAGGACGGGCAAGCGACACACTCTCTGTTCGACGTCAAACTCTGCG
ACTTCGGACTCTGTTCCTCCTTTGTCCGCGGACAGTTTCTGAAGGATTTC
TGCGGCTCCCCCGGATTTTTCGCCCCGGAAATGATCACTCAGTCCATGGG
CTACGACGGGCCCAAGGCGGACTTGTGGAGCGTGGGGTGCATCCTTCTAG
AACTCAGCGTGGGTCACGACATCTTCTGCGAGGAGTGGATGGCCGCCTAC
GACTACGAGTTGCTGCATGATCCACCTGCCTTCGAGGCCAAGATGAGGGA
AAGCCTGCAAGAGATCGAGAGAACGATGCGTGAGCGACTGGACTTAGATC
CTATAATGATCGACTTTGTCTTGGGGCTCTTAGTCCTGGACCCGGCGGGA
CGGAGAGGAATGGAGGAGATAGTGACGCATCCATGGGTAAGACTGCCGGG
GGGAGAAGGCTTTCTCACGGAGGGCCTAGAGGGAAGCGAGGCGCCCTTTG
GCAGTGTCACCATGTCGACGCACGGTACACAGATGAGCGGCAGGACACGG
AGCCTTCGGGTAGCGGGCTCCAGTCCCCTGCCCGAGGTGCTGAAAAAGAA
GGCGAAGCCCAGGGGCTTAGCTAGCATCCAGGCCAAAGAGGCAGGAAGAG
AGGGGGCCACGTGCCAGGGGGAGGAGGAGGAGAATGGAGCAGGGGTTGGG
ATGGGCGAAGGTGTTCAAGGAGACGGAGTGCAGTCCTTTCGACCCATTGA
CAGTGACAATCACGGGGCGGAAAGTGACGACCATATCGTGGCGGACAGTC
TTCTGCCTTTGCCTTCTCTCCCTGCTCTCTTCGCCATTCAGGAGCAACGC
AGCGGAGCCACCCCCTCCCCACCCCCACCCTCCCTCCGTAGCTCTCTCAG
CCACAAGGTGCGACAGAAGATGCTGGAACATAAGCGGACCGTCCATTTAC
CGCCCCTGGAACCCAAAACACCGGCATTGACCACTGCTTCGCGCCGCCTG
TGGGAGTGCGGGGCTGGATCGCTCGGAGGAGACGAAGGTCGCATGGAAGG
GGCCGACGGGAAGGGCGAAGGAGAGGACCGGGCATCGCCTGCATACCCCG
CCTCGGCGACAGTGGGTGCTCGCCCCGTGCTCTCTCAACTCCCCCCGCTA
TCTCCAGGGGTGAGCGGCCCTCGAAGCAGCAGTGGCAGTAGCCTGAGCTC
AAGTCGGAGCAGAGATAACAGCCGCCATAGCAGCAGAAGCGGCGACGATG
TCTTTGAGATTTCTCACCTCCCAACCTTGCCGACGACGGAGCTTTTGCAG
AAAAAGGGACAACGTACCAATGCAGTTGAGTCACTCAGAGAGACTGAAGA
CGCAAAGCAACCAACCCCTCTCCCTCCCTCGCCCGTGTCCGCAAAGCAGA
GTGCACGAGTCCTCCCATGGTAGTGTGGCAACAGGGGAAAGAAAGGTTTC
GAGAGAACGGCAGTGGGAAGGAGAAGGTCGTACTCTGACTCGGCTCTTCC
AGATGTTCCCAGAGCGACTGCGACAAGGAGATCGAGGGTGAGCCCAAATG
TGCTGCGACAGAAAGACACAGCGTGGGAGGAGGGAACCAAGCATAAAGGA
AGCCAGCTGGGCTTGGCGGAGCATTCAGCAAGCGCCGAGACGATCGTGTC
GATGTTCAAACTCCAGCATTGAAGCAGATTGGAGACAAAGCCCTACCCCT
CCAGGAGAAAGAGCTTCAAGAAGTATTATGTCTTGTGAGCGGCTGTGTCA
GATATTGGGAAGATAGAGGATAGGACCGCAGGGGAACCGTGCATTCCCTT
GGTGAAATGATGTGATGAAGGGAATGAAGAACGGGTAGTAAGGGTAGCTG
GCTGTCAACTGCACGGTCTCTCACATACTCGGTAACGAAAGAAGACCGGT
GCAGTGAAAAAAAGGCCGCGGCCGCTATCGCACGAGGGGAAGGCCATCTA
C back to topprotein sequence of rna5987 >rna5987-protein ID=rna5987-protein|Name=rna5987|organism=Nannochloropsis gaditana|type=polypeptide|length=684bp
MALNPTGDNGFSLQDAHFEVDKLDTQLHPSHRPHHQGGYAQPSPAGIAVG
ESEAFATGTGWPASPIPGVPPVRTREEYSVRYKERVHRLEANASLWDYLL
FVPHAMYMFMNRLCDAFGFKFIGLLMCVYGLSQGLGENYMSMSTDYYLKD
VLKLEPASAQAFKSLTHLPWNIKPIYGLMSDTLPIMGFKRSPYIILAGGL
GVTAWLTLALLRRPSFNLSAFLILLANYSIASPDVIIDAAITERSQLAPM
YASDLQSLSWGSHSLGGILGCSTVGQAQAHLHSRGVFALTSLTSLSILIL
ASLRWLPEKQIPRGPERSNACRLAWHKGGQRSLYLLAFFVALCAVFLATT
INHIENRLTGGYITIAVAVIVTAVVYTTLGRISPKIARPAIYFFLREALQ
PNIAEAMFYWYTSAEGGPGFKPQFLGILNCIASVSMIVGISLYNRYMSTW
KYRTIFIASQFLMVGAGMLDWVLVKRLNLRVGISDKAFVLGDEALVPLLR
RFAAIPFFVLAAKVCPARCEATLFALLMALSNFGGDVGSYMGVGLLKAFS
VSRADYSRLPQVVLVKTFCRFIPVMLIPFLIPDASPADEILTEKEKLLKE
GEDEEGDGEDGGEMEGVEMGRVVMEEESSPARRRQKGSSGSERGLMGQRL
EGGREGGVGGGEVRPELGHLGTPLAMAGGEKDSL back to topmRNA from alignment at CM002467.1:294757..297685- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5987 ID=rna5987|Name=rna5987|organism=Nannochloropsis gaditana|type=mRNA|length=2929bp|location=Sequence derived from alignment at CM002467.1:294757..297685- (Nannochloropsis gaditana)
GGATGTTAAAAGTAATTGTAAGGGGCTTTTGCCGGGGTTGCGAAAACTTA
AAAGGACATAGAATGCAGAGCTTTCCCACTCAAGTGCTGCGTCTCGATCC
CACCCTTCCTCATCTATACATCCATACGTCACTCAAAATAACGCTCTTAA
ACCAACGTCAGGAGGGACTTCGGCAGATTATTTGGGCGCTTTCAGTCGGA
TAGACAGAGGTGTACCACAATTTTCGGCGCATCTCGTCTCCTTTCCCCCG
TCCCCTCTGTTGGAGAATTGAGCCTGAGCCCCAGCCTTGTGACGCCCTGA
GACCACGCCTGCCCGGATTCGATTCTTACATTATTTTTACCGGAAAACCC
GCCATCTAGAAGCTGGTGTATTTGCATGGCATTAAACCCCACGGGCGACA
ACGGCTTCAGCCTTCAAGATGCCCACTTTGAGGTAGACAAGCTCGACACA
CAGCTTCATCCTTCCCATCGTCCCCACCATCAAGGCGGCTATGCGCAACC
GTCGCCAGCAGGCATTGCCGTGGGAGAATCGGAGGCATTTGCCACTGGTA
CAGGATGGCCGGCCTCACCAATACCAGGGGTTCCGCCGGTACGCACACGG
GAGGAGTACAGTGTCCGCTACAAAGAGCGAGTGCACCGCCTCGAGGCCAA
CGCCTCCCTTTGGGACTACTTGCTCTTCGTGCCCCACGCTATGTACATGT
TCATGAACCGGTTGTGCGACGCATTCGGTTTCAAATTCATCGGCCTCCTG
ATGTGCGTGTACGGGCTCTCGCAGGGTCTAGGCGAGAACTACATGTCCAT
GTCCACAGACTACTACTTGAAGGACGTCTTGAAGCTCGAACCCGCCTCGG
CCCAGGCATTTAAAAGCCTCACGCACCTGCCCTGGAACATCAAGCCCATC
TACGGCCTGATGAGCGACACATTGCCCATCATGGGCTTCAAGCGCAGCCC
CTACATCATTTTGGCGGGCGGTCTGGGCGTCACCGCCTGGCTGACCCTCG
CGCTCCTGCGACGACCGTCCTTTAACCTCTCCGCCTTCCTCATCCTCCTC
GCCAACTACAGCATCGCCTCCCCCGACGTGATCATCGACGCTGCTATCAC
CGAGCGGTCGCAGCTCGCGCCCATGTATGCCTCCGACCTCCAGTCCCTCT
CCTGGGGCAGCCATTCTCTGGGCGGGATCCTCGGCTGCTCCACCGTCGGC
CAAGCACAAGCGCACTTGCACTCCCGCGGCGTCTTCGCCCTGACCTCTCT
CACCTCCCTCTCCATCCTGATCCTGGCCTCCTTGCGCTGGCTCCCGGAGA
AGCAAATCCCTCGGGGCCCCGAGCGTTCCAACGCCTGCCGCCTGGCCTGG
CATAAAGGGGGGCAACGCTCCCTTTACCTCCTCGCCTTTTTCGTGGCCCT
GTGCGCCGTATTTCTCGCCACCACGATCAACCACATCGAAAATCGGCTGA
CCGGGGGCTACATCACCATCGCCGTCGCCGTCATTGTCACCGCCGTCGTC
TACACCACCCTCGGGCGAATATCCCCGAAAATTGCCCGACCTGCCATATA
TTTCTTTCTGCGCGAGGCCCTGCAACCCAACATCGCAGAGGCCATGTTCT
ACTGGTACACGTCGGCGGAGGGCGGCCCTGGCTTTAAACCCCAGTTCTTA
GGGATTTTGAACTGCATCGCCAGCGTCTCCATGATTGTGGGCATCTCCCT
CTACAACAGGTAGGGTCCCGTGTAGGGGTACAGCGGGTGTCGATGCACAC
AATGCTCCGGCTTGTGGCGCGCACGTGGCCCGTCATGTAAGTTGAGGACG
AATCCTGCAGCCTGAAGCCCCTCCCCCTCCCCCTTCCCCTCCCCCTTCCC
CCTTAGGTATATGTCCACCTGGAAGTACCGCACCATATTCATCGCCTCGC
AATTCTTGATGGTGGGCGCCGGCATGCTGGACTGGGTCCTGGTCAAACGC
TTGAACCTCCGGGTAGGAATCAGCGACAAGGCCTTCGTGCTCGGGGACGA
GGCCCTGGTCCCTCTATTGCGCCGCTTCGCCGCCATTCCCTTCTTCGTCC
TTGCGGCCAAGGTCTGCCCGGCGCGCTGCGAAGCCACCCTCTTCGCCCTG
CTCATGGCCCTGAGCAATTTTGGGGGCGACGTGGGGAGCTACATGGGCGT
GGGATTGCTCAAAGCCTTCAGCGTCTCACGCGCGGACTACTCCCGGCTCC
CGCAGGTGGTGTTGGTGAAGACCTTCTGCCGGTTCATCCCCGTCATGCTG
ATCCCTTTCCTCATCCCCGACGCGAGCCCGGCCGATGAGATCTTGACCGA
GAAAGAGAAGCTCCTCAAGGAAGGGGAGGATGAAGAGGGCGACGGGGAGG
ACGGCGGGGAAATGGAGGGCGTGGAGATGGGCCGCGTGGTCATGGAGGAA
GAGTCCAGTCCTGCGCGGCGGCGGCAGAAAGGCTCCAGTGGGAGTGAACG
CGGGCTGATGGGACAAAGGCTGGAGGGAGGGAGGGAGGGAGGGGTCGGGG
GGGGAGAGGTGCGGCCGGAGCTTGGTCATCTCGGCACGCCACTGGCCATG
GCGGGCGGCGAGAAAGATTCCTTGTAGGGGTAGCGGGGTTTTGAATAGGG
GCAGGGGCGCTCCAAAGTTCAGTCCGCCGATCGTTGGATGTGACGTTGTG
CCCTGCTCTCTCTCGTATGAGGGAACAATGGGTTGATTAGAAGGGGTGCG
GAGGGGTGCGGAGGGGAGGGGAAGGGGGTGCACAGATGAGAAAGTCGTGC
ATGGCTATTGTCTCAGGATGCGGTCACTCCATAGTGGACGGGCGGCGCGT
AAGTAAATAATTATGGTTAGATGGGGACGAGATGCAAATCATCCGATGGA
AATGAATTGAATTTACCCAAAGCCTGGAAGGAAATAAACTGACAAAGAAT
CATGTACGGTTGTAGATGGCCTTCCCCTC back to topCoding sequence (CDS) from alignment at CM002467.1:294757..297685- >rna5987 ID=rna5987|Name=rna5987|organism=Nannochloropsis gaditana|type=CDS|length=4110bp|location=Sequence derived from alignment at CM002467.1:294757..297685- (Nannochloropsis gaditana)
GTATATGTCCACCTGGAAGTACCGCACCATATTCATCGCCTCGCAATTCT
TGATGGTGGGCGCCGGCATGCTGGACTGGGTCCTGGTCAAACGCTTGAAC
CTCCGGGTAGGAATCAGCGACAAGGCCTTCGTGCTCGGGGACGAGGCCCT
GGTCCCTCTATTGCGCCGCTTCGCCGCCATTCCCTTCTTCGTCCTTGCGG
CCAAGGTCTGCCCGGCGCGCTGCGAAGCCACCCTCTTCGCCCTGCTCATG
GCCCTGAGCAATTTTGGGGGCGACGTGGGGAGCTACATGGGCGTGGGATT
GCTCAAAGCCTTCAGCGTCTCACGCGCGGACTACTCCCGGCTCCCGCAGG
TGGTGTTGGTGAAGACCTTCTGCCGGTTCATCCCCGTCATGCTGATCCCT
TTCCTCATCCCCGACGCGAGCCCGGCCGATGAGATCTTGACCGAGAAAGA
GAAGCTCCTCAAGGAAGGGGAGGATGAAGAGGGCGACGGGGAGGACGGCG
GGGAAATGGAGGGCGTGGAGATGGGCCGCGTGGTCATGGAGGAAGAGTCC
AGTCCTGCGCGGCGGCGGCAGAAAGGCTCCAGTGGGAGTGAACGCGGGCT
GATGGGACAAAGGCTGGAGGGAGGGAGGGAGGGAGGGGTCGGGGGGGGAG
AGGTGCGGCCGGAGCTTGGTCATCTCGGCACGCCACTGGCCATGGCGGGC
GGCGAGAAAGATTCCTTGTAGATGGCATTAAACCCCACGGGCGACAACGG
CTTCAGCCTTCAAGATGCCCACTTTGAGGTAGACAAGCTCGACACACAGC
TTCATCCTTCCCATCGTCCCCACCATCAAGGCGGCTATGCGCAACCGTCG
CCAGCAGGCATTGCCGTGGGAGAATCGGAGGCATTTGCCACTGGTACAGG
ATGGCCGGCCTCACCAATACCAGGGGTTCCGCCGGTACGCACACGGGAGG
AGTACAGTGTCCGCTACAAAGAGCGAGTGCACCGCCTCGAGGCCAACGCC
TCCCTTTGGGACTACTTGCTCTTCGTGCCCCACGCTATGTACATGTTCAT
GAACCGGTTGTGCGACGCATTCGGTTTCAAATTCATCGGCCTCCTGATGT
GCGTGTACGGGCTCTCGCAGGGTCTAGGCGAGAACTACATGTCCATGTCC
ACAGACTACTACTTGAAGGACGTCTTGAAGCTCGAACCCGCCTCGGCCCA
GGCATTTAAAAGCCTCACGCACCTGCCCTGGAACATCAAGCCCATCTACG
GCCTGATGAGCGACACATTGCCCATCATGGGCTTCAAGCGCAGCCCCTAC
ATCATTTTGGCGGGCGGTCTGGGCGTCACCGCCTGGCTGACCCTCGCGCT
CCTGCGACGACCGTCCTTTAACCTCTCCGCCTTCCTCATCCTCCTCGCCA
ACTACAGCATCGCCTCCCCCGACGTGATCATCGACGCTGCTATCACCGAG
CGGTCGCAGCTCGCGCCCATGTATGCCTCCGACCTCCAGTCCCTCTCCTG
GGGCAGCCATTCTCTGGGCGGGATCCTCGGCTGCTCCACCGTCGGCCAAG
CACAAGCGCACTTGCACTCCCGCGGCGTCTTCGCCCTGACCTCTCTCACC
TCCCTCTCCATCCTGATCCTGGCCTCCTTGCGCTGGCTCCCGGAGAAGCA
AATCCCTCGGGGCCCCGAGCGTTCCAACGCCTGCCGCCTGGCCTGGCATA
AAGGGGGGCAACGCTCCCTTTACCTCCTCGCCTTTTTCGTGGCCCTGTGC
GCCGTATTTCTCGCCACCACGATCAACCACATCGAAAATCGGCTGACCGG
GGGCTACATCACCATCGCCGTCGCCGTCATTGTCACCGCCGTCGTCTACA
CCACCCTCGGGCGAATATCCCCGAAAATTGCCCGACCTGCCATATATTTC
TTTCTGCGCGAGGCCCTGCAACCCAACATCGCAGAGGCCATGTTCTACTG
GTACACGTCGGCGGAGGGCGGCCCTGGCTTTAAACCCCAGTTCTTAGGGA
TTTTGAACTGCATCGCCAGCGTCTCCATGATTGTGGGCATCTCCCTCTAC
AACAGGTATATGTCCACCTGGAAGTACCGCACCATATTCATCGCCTCGCA
ATTCTTGATGGTGGGCGCCGGCATGCTGGACTGGGTCCTGGTCAAACGCT
TGAACCTCCGGGTAGGAATCAGCGACAAGGCCTTCGTGCTCGGGGACGAG
GCCCTGGTCCCTCTATTGCGCCGCTTCGCCGCCATTCCCTTCTTCGTCCT
TGCGGCCAAGGTCTGCCCGGCGCGCTGCGAAGCCACCCTCTTCGCCCTGC
TCATGGCCCTGAGCAATTTTGGGGGCGACGTGGGGAGCTACATGGGCGTG
GGATTGCTCAAAGCCTTCAGCGTCTCACGCGCGGACTACTCCCGGCTCCC
GCAGGTGGTGTTGGTGAAGACCTTCTGCCGGTTCATCCCCGTCATGCTGA
TCCCTTTCCTCATCCCCGACGCGAGCCCGGCCGATGAGATCTTGACCGAG
AAAGAGAAGCTCCTCAAGGAAGGGGAGGATGAAGAGGGCGACGGGGAGGA
CGGCGGGGAAATGGAGGGCGTGGAGATGGGCCGCGTGGTCATGGAGGAAG
AGTCCAGTCCTGCGCGGCGGCGGCAGAAAGGCTCCAGTGGGAGTGAACGC
GGGCTGATGGGACAAAGGCTGGAGGGAGGGAGGGAGGGAGGGGTCGGGGG
GGGAGAGGTGCGGCCGGAGCTTGGTCATCTCGGCACGCCACTGGCCATGG
CGGGCGGCGAGAAAGATTCCTTGTAGATGGCATTAAACCCCACGGGCGAC
AACGGCTTCAGCCTTCAAGATGCCCACTTTGAGGTAGACAAGCTCGACAC
ACAGCTTCATCCTTCCCATCGTCCCCACCATCAAGGCGGCTATGCGCAAC
CGTCGCCAGCAGGCATTGCCGTGGGAGAATCGGAGGCATTTGCCACTGGT
ACAGGATGGCCGGCCTCACCAATACCAGGGGTTCCGCCGGTACGCACACG
GGAGGAGTACAGTGTCCGCTACAAAGAGCGAGTGCACCGCCTCGAGGCCA
ACGCCTCCCTTTGGGACTACTTGCTCTTCGTGCCCCACGCTATGTACATG
TTCATGAACCGGTTGTGCGACGCATTCGGTTTCAAATTCATCGGCCTCCT
GATGTGCGTGTACGGGCTCTCGCAGGGTCTAGGCGAGAACTACATGTCCA
TGTCCACAGACTACTACTTGAAGGACGTCTTGAAGCTCGAACCCGCCTCG
GCCCAGGCATTTAAAAGCCTCACGCACCTGCCCTGGAACATCAAGCCCAT
CTACGGCCTGATGAGCGACACATTGCCCATCATGGGCTTCAAGCGCAGCC
CCTACATCATTTTGGCGGGCGGTCTGGGCGTCACCGCCTGGCTGACCCTC
GCGCTCCTGCGACGACCGTCCTTTAACCTCTCCGCCTTCCTCATCCTCCT
CGCCAACTACAGCATCGCCTCCCCCGACGTGATCATCGACGCTGCTATCA
CCGAGCGGTCGCAGCTCGCGCCCATGTATGCCTCCGACCTCCAGTCCCTC
TCCTGGGGCAGCCATTCTCTGGGCGGGATCCTCGGCTGCTCCACCGTCGG
CCAAGCACAAGCGCACTTGCACTCCCGCGGCGTCTTCGCCCTGACCTCTC
TCACCTCCCTCTCCATCCTGATCCTGGCCTCCTTGCGCTGGCTCCCGGAG
AAGCAAATCCCTCGGGGCCCCGAGCGTTCCAACGCCTGCCGCCTGGCCTG
GCATAAAGGGGGGCAACGCTCCCTTTACCTCCTCGCCTTTTTCGTGGCCC
TGTGCGCCGTATTTCTCGCCACCACGATCAACCACATCGAAAATCGGCTG
ACCGGGGGCTACATCACCATCGCCGTCGCCGTCATTGTCACCGCCGTCGT
CTACACCACCCTCGGGCGAATATCCCCGAAAATTGCCCGACCTGCCATAT
ATTTCTTTCTGCGCGAGGCCCTGCAACCCAACATCGCAGAGGCCATGTTC
TACTGGTACACGTCGGCGGAGGGCGGCCCTGGCTTTAAACCCCAGTTCTT
AGGGATTTTGAACTGCATCGCCAGCGTCTCCATGATTGTGGGCATCTCCC
TCTACAACAG back to top
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