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Properties
| Property Name | Value |
|---|
| Product | heat shock transcription factor |
| Orig transcript id | gnl|cribi|Naga_100076g18.8815.mrna |
| Orig protein id | gnl|cribi|Naga_100076g18.8815 |
| Gene | HSF |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:278909..281015 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5981 ID=rna5981|Name=rna5981|organism=Nannochloropsis gaditana|type=mRNA|length=771bp
ATGCAGTGGCGAGCGAGGCTAGATCAGTGGGTACGGACGGATATCTCAGG
TGCGTGCATGCGCACGTGGGGACTCGACCGTGAGCAGGAATGCCTCCTTG
CCCTGTCGCTGAAGCTTGGGCGCATGAGCACCGATCTGAAACCAAGCCCT
GGTTGGACCAGCACGGGCGGGAAAGGTCGGCCAGGGACGCAAGTCAGAGG
GTTTGACGTGTGCGCTTGGCAGCCCTGTCGCTTGAGCCATGGCCACTTTC
GGTCCTGTATTGTCGTACTTATTAAGCTACCATGTGAATATCTGATGACC
CAGCCCGGAGCACTTCCATACCAACAAGCCAGAAGAATGTGGAGATGTCG
ACGAGGGGCTTGTCTGTTTTATCACTCAATAGTATACACGCTTTTCAAAG
ACCAGACGGAGAATTTAACAAGACAGACGTATTATAAGCTTTCATCGACG
AAAAGGAGGGGGAAATCTGTGGAGCCCGAACAAGTCGCATCACAAGAGGT
TGTCAGAAGAATATCTTTGCCTATCACCACCGAGGGCGTGAGCGAATTCC
GAGGTGAAGGTCGAGCCTGGGAACGTGGCAACAAATGTGGAGCCCGTGCG
ACTGGAATTTCCAACACGTGCGACTCACAGGACTTCTCCGCGTGCAGCAC
TTTGTATCAAAGACACATGCCGAAGACCGCTCAAGATGATGCAAGAAGGA
AAGAAGAAACGAGAAGACAAGGGGCATGTACTGCAGAAGGAGAAGGTAAA
GGACGCAAAGGAACTGTCTGA back to topprotein sequence of rna5981 >rna5981-protein ID=rna5981-protein|Name=rna5981|organism=Nannochloropsis gaditana|type=polypeptide|length=625bp
MTNKAMAFLGDQHHREDERRQSIECSGLQHAIRPATRQETALPSRSNSTA
SEDDEDIQSDLVPSANTFIRKLFQMVTSENNDIISFTPDGLSFHVKDPVR
LENEVLPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQQGKPH
LLDDLKRKPSASLVKSRTESSSRRGSGSMGRHGAGNSHSVGRPMSASGSR
RGSRSVSPLCSFESGTTTPSSSDSSPSISPSRGALKRTRRQEASLSRASS
ESSSLTSSESSPVPYDDAKHLVAGVTGAGMTCLETLSQAASSVGQNAPKA
ARLEREAAASYGSHGEEEQEQEQEEGMQVSYWQPPDEGPEEEVEVQKEEE
DEACWVMKTMMMRGREGGAESGFEEGMQALPDEEEIVVVTKASFAPTLAK
KEGPQGHKAHPPSLPFAHGPRETSPGPEKSSLGHLGVKPLPPPSFPPSSL
PPDLPPPTSYHPSREELRTWGYIQSQWSAAGQSQQQALLASLPSHCHQAW
ASFFLIIPPFQTHQRLIRACHRLLCSNPALAASVTEHRHALDPLGRSADS
TFLLPADAGEEEVEKLSIGTVAAGHNDRALREVLGFGLNHLVESARFLHT
TEGSPAALALRECLQAWKCHMGRWL back to topmRNA from alignment at CM002467.1:278909..281015- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5981 ID=rna5981|Name=rna5981|organism=Nannochloropsis gaditana|type=mRNA|length=2107bp|location=Sequence derived from alignment at CM002467.1:278909..281015- (Nannochloropsis gaditana)
ATGACAAATAAAGCCATGGCTTTCCTTGGAGACCAACACCATCGCGAAGA
CGAGCGGCGACAATCGATCGAATGCTCAGGGCTTCAGCATGCTATCAGAC
CTGCAACGCGCCAAGAGACAGCATTGCCATCCCGATCAAATTCCACGGCA
TCAGAGGACGACGAGGACATCCAAAGCGACCTCGTGCCTTCGGCCAATAC
ATTCATCCGCAAGCTCTTTCAAATGGTCACGAGTGAGAACAATGACATCA
TCTCCTTTACTCCAGGTACGGTTTCAATTTCGATCAGACAAGAGAATGTT
GCTAGCTTCCCTCCCTCCCTCGTCCTCTATGCATGAAGCTTATTTTTGCT
GCATGAGAGCTTGTCGACCCCTGAGCATGCGTCAAGGCCAATCCAGGAGA
TTTTACTGGGACCTCTGACCACCCATCAATTCTGCCCATGGTCCTTTTTC
CTCGCAAACCTGACGCCCGACCCCTTCCTGCACATATCGCACAGATGGTC
TCTCCTTCCACGTGAAAGACCCCGTCCGTCTCGAGAACGAAGTGCTCCCC
AAGTACTTCCGCCACTCCCGCTTTCAATCGTTGGTCCGCCAGCTCAACTT
CTACGATTTTAAAAAGATCAGCAAAGAGCGCGTGATCTGGATCTACCGGC
ACAAGCTCTTCCAGCAAGGCAAGCCCCACCTCTTGGACGACTTGAAACGG
AAGCCATCCGCCTCCCTAGTCAAAAGCCGGACAGAATCCTCGTCCCGCCG
GGGCAGCGGCAGCATGGGCCGGCACGGCGCAGGCAACAGCCATAGCGTCG
GCCGGCCCATGTCCGCATCCGGGAGCCGCCGTGGGAGCAGGTCCGTCTCG
CCTCTCTGCAGCTTCGAGTCAGGGACCACCACTCCCTCCTCCTCCGATAG
CAGCCCCAGCATTTCGCCTAGCCGGGGGGCCCTCAAGCGCACGCGCCGAC
AAGAAGCCTCCCTCTCCCGCGCCTCTTCCGAGTCCTCCTCCCTCACCTCT
TCCGAGTCCTCCCCCGTTCCGTACGACGATGCGAAGCACTTGGTGGCGGG
TGTGACGGGGGCGGGCATGACTTGCCTGGAGACCCTTTCACAAGCCGCCA
GTTCGGTCGGTCAGAATGCCCCGAAGGCAGCGCGGCTGGAAAGAGAGGCT
GCCGCCTCCTACGGCTCTCACGGGGAGGAGGAGCAGGAGCAGGAGCAGGA
GGAGGGGATGCAAGTCTCGTATTGGCAGCCGCCGGACGAGGGGCCTGAGG
AGGAAGTGGAGGTGCAGAAGGAAGAGGAGGATGAGGCGTGCTGGGTGATG
AAGACGATGATGATGCGGGGACGGGAGGGGGGCGCGGAGTCGGGCTTCGA
GGAGGGAATGCAGGCGCTGCCGGACGAGGAGGAGATCGTGGTCGTGACCA
AGGCAAGCTTTGCCCCCACCTTGGCGAAAAAGGAGGGCCCACAGGGGCAC
AAAGCGCATCCTCCCTCCCTTCCATTCGCCCACGGCCCGCGAGAGACGAG
TCCGGGCCCCGAGAAGTCCTCCCTCGGACACCTTGGAGTCAAGCCTCTCC
CCCCTCCCTCCTTCCCTCCTTCCTCGCTTCCCCCCGACCTCCCTCCCCCG
ACCTCCTACCACCCGTCCCGGGAGGAGCTTCGGACGTGGGGCTATATACA
GAGCCAGTGGAGTGCCGCCGGGCAGTCCCAGCAGCAAGCCCTCCTCGCCT
CCCTCCCCAGCCATTGTCACCAGGCGTGGGCCTCCTTCTTCCTCATCATC
CCCCCCTTCCAAACACATCAACGCCTCATTCGCGCCTGTCACCGCCTCCT
ATGCTCCAACCCTGCCTTGGCCGCGTCCGTGACCGAGCATCGCCACGCCC
TCGATCCTCTGGGCCGTAGCGCCGACAGCACCTTCCTCCTGCCCGCGGAC
GCAGGGGAGGAGGAGGTCGAGAAGCTGAGCATTGGGACCGTCGCGGCGGG
GCACAATGACCGCGCACTCCGGGAGGTGCTGGGCTTCGGCTTGAATCATT
TGGTGGAGTCCGCCCGCTTCCTTCACACCACCGAGGGATCACCGGCCGCC
CTGGCTCTGCGGGAGTGTCTGCAGGCGTGGAAGTGCCACATGGGCCGGTG
GCTGTGA back to topCoding sequence (CDS) from alignment at CM002467.1:278909..281015- >rna5981 ID=rna5981|Name=rna5981|organism=Nannochloropsis gaditana|type=CDS|length=3756bp|location=Sequence derived from alignment at CM002467.1:278909..281015- (Nannochloropsis gaditana)
ATGGTCTCTCCTTCCACGTGAAAGACCCCGTCCGTCTCGAGAACGAAGTG
CTCCCCAAGTACTTCCGCCACTCCCGCTTTCAATCGTTGGTCCGCCAGCT
CAACTTCTACGATTTTAAAAAGATCAGCAAAGAGCGCGTGATCTGGATCT
ACCGGCACAAGCTCTTCCAGCAAGGCAAGCCCCACCTCTTGGACGACTTG
AAACGGAAGCCATCCGCCTCCCTAGTCAAAAGCCGGACAGAATCCTCGTC
CCGCCGGGGCAGCGGCAGCATGGGCCGGCACGGCGCAGGCAACAGCCATA
GCGTCGGCCGGCCCATGTCCGCATCCGGGAGCCGCCGTGGGAGCAGGTCC
GTCTCGCCTCTCTGCAGCTTCGAGTCAGGGACCACCACTCCCTCCTCCTC
CGATAGCAGCCCCAGCATTTCGCCTAGCCGGGGGGCCCTCAAGCGCACGC
GCCGACAAGAAGCCTCCCTCTCCCGCGCCTCTTCCGAGTCCTCCTCCCTC
ACCTCTTCCGAGTCCTCCCCCGTTCCGTACGACGATGCGAAGCACTTGGT
GGCGGGTGTGACGGGGGCGGGCATGACTTGCCTGGAGACCCTTTCACAAG
CCGCCAGTTCGGTCGGTCAGAATGCCCCGAAGGCAGCGCGGCTGGAAAGA
GAGGCTGCCGCCTCCTACGGCTCTCACGGGGAGGAGGAGCAGGAGCAGGA
GCAGGAGGAGGGGATGCAAGTCTCGTATTGGCAGCCGCCGGACGAGGGGC
CTGAGGAGGAAGTGGAGGTGCAGAAGGAAGAGGAGGATGAGGCGTGCTGG
GTGATGAAGACGATGATGATGCGGGGACGGGAGGGGGGCGCGGAGTCGGG
CTTCGAGGAGGGAATGCAGGCGCTGCCGGACGAGGAGGAGATCGTGGTCG
TGACCAAGGCAAGCTTTGCCCCCACCTTGGCGAAAAAGGAGGGCCCACAG
GGGCACAAAGCGCATCCTCCCTCCCTTCCATTCGCCCACGGCCCGCGAGA
GACGAGTCCGGGCCCCGAGAAGTCCTCCCTCGGACACCTTGGAGTCAAGC
CTCTCCCCCCTCCCTCCTTCCCTCCTTCCTCGCTTCCCCCCGACCTCCCT
CCCCCGACCTCCTACCACCCGTCCCGGGAGGAGCTTCGGACGTGGGGCTA
TATACAGAGCCAGTGGAGTGCCGCCGGGCAGTCCCAGCAGCAAGCCCTCC
TCGCCTCCCTCCCCAGCCATTGTCACCAGGCGTGGGCCTCCTTCTTCCTC
ATCATCCCCCCCTTCCAAACACATCAACGCCTCATTCGCGCCTGTCACCG
CCTCCTATGCTCCAACCCTGCCTTGGCCGCGTCCGTGACCGAGCATCGCC
ACGCCCTCGATCCTCTGGGCCGTAGCGCCGACAGCACCTTCCTCCTGCCC
GCGGACGCAGGGGAGGAGGAGGTCGAGAAGCTGAGCATTGGGACCGTCGC
GGCGGGGCACAATGACCGCGCACTCCGGGAGGTGCTGGGCTTCGGCTTGA
ATCATTTGGTGGAGTCCGCCCGCTTCCTTCACACCACCGAGGGATCACCG
GCCGCCCTGGCTCTGCGGGAGTGTCTGCAGGCGTGGAAGTGCCACATGGG
CCGGTGGCTGTGAATGACAAATAAAGCCATGGCTTTCCTTGGAGACCAAC
ACCATCGCGAAGACGAGCGGCGACAATCGATCGAATGCTCAGGGCTTCAG
CATGCTATCAGACCTGCAACGCGCCAAGAGACAGCATTGCCATCCCGATC
AAATTCCACGGCATCAGAGGACGACGAGGACATCCAAAGCGACCTCGTGC
CTTCGGCCAATACATTCATCCGCAAGCTCTTTCAAATGGTCACGAGTGAG
AACAATGACATCATCTCCTTTACTCCAGATGGTCTCTCCTTCCACGTGAA
AGACCCCGTCCGTCTCGAGAACGAAGTGCTCCCCAAGTACTTCCGCCACT
CCCGCTTTCAATCGTTGGTCCGCCAGCTCAACTTCTACGATTTTAAAAAG
ATCAGCAAAGAGCGCGTGATCTGGATCTACCGGCACAAGCTCTTCCAGCA
AGGCAAGCCCCACCTCTTGGACGACTTGAAACGGAAGCCATCCGCCTCCC
TAGTCAAAAGCCGGACAGAATCCTCGTCCCGCCGGGGCAGCGGCAGCATG
GGCCGGCACGGCGCAGGCAACAGCCATAGCGTCGGCCGGCCCATGTCCGC
ATCCGGGAGCCGCCGTGGGAGCAGGTCCGTCTCGCCTCTCTGCAGCTTCG
AGTCAGGGACCACCACTCCCTCCTCCTCCGATAGCAGCCCCAGCATTTCG
CCTAGCCGGGGGGCCCTCAAGCGCACGCGCCGACAAGAAGCCTCCCTCTC
CCGCGCCTCTTCCGAGTCCTCCTCCCTCACCTCTTCCGAGTCCTCCCCCG
TTCCGTACGACGATGCGAAGCACTTGGTGGCGGGTGTGACGGGGGCGGGC
ATGACTTGCCTGGAGACCCTTTCACAAGCCGCCAGTTCGGTCGGTCAGAA
TGCCCCGAAGGCAGCGCGGCTGGAAAGAGAGGCTGCCGCCTCCTACGGCT
CTCACGGGGAGGAGGAGCAGGAGCAGGAGCAGGAGGAGGGGATGCAAGTC
TCGTATTGGCAGCCGCCGGACGAGGGGCCTGAGGAGGAAGTGGAGGTGCA
GAAGGAAGAGGAGGATGAGGCGTGCTGGGTGATGAAGACGATGATGATGC
GGGGACGGGAGGGGGGCGCGGAGTCGGGCTTCGAGGAGGGAATGCAGGCG
CTGCCGGACGAGGAGGAGATCGTGGTCGTGACCAAGGCAAGCTTTGCCCC
CACCTTGGCGAAAAAGGAGGGCCCACAGGGGCACAAAGCGCATCCTCCCT
CCCTTCCATTCGCCCACGGCCCGCGAGAGACGAGTCCGGGCCCCGAGAAG
TCCTCCCTCGGACACCTTGGAGTCAAGCCTCTCCCCCCTCCCTCCTTCCC
TCCTTCCTCGCTTCCCCCCGACCTCCCTCCCCCGACCTCCTACCACCCGT
CCCGGGAGGAGCTTCGGACGTGGGGCTATATACAGAGCCAGTGGAGTGCC
GCCGGGCAGTCCCAGCAGCAAGCCCTCCTCGCCTCCCTCCCCAGCCATTG
TCACCAGGCGTGGGCCTCCTTCTTCCTCATCATCCCCCCCTTCCAAACAC
ATCAACGCCTCATTCGCGCCTGTCACCGCCTCCTATGCTCCAACCCTGCC
TTGGCCGCGTCCGTGACCGAGCATCGCCACGCCCTCGATCCTCTGGGCCG
TAGCGCCGACAGCACCTTCCTCCTGCCCGCGGACGCAGGGGAGGAGGAGG
TCGAGAAGCTGAGCATTGGGACCGTCGCGGCGGGGCACAATGACCGCGCA
CTCCGGGAGGTGCTGGGCTTCGGCTTGAATCATTTGGTGGAGTCCGCCCG
CTTCCTTCACACCACCGAGGGATCACCGGCCGCCCTGGCTCTGCGGGAGT
GTCTGCAGGCGTGGAAGTGCCACATGGGCCGGTGGCTGTGAATGACAAAT
AAAGCCATGGCTTTCCTTGGAGACCAACACCATCGCGAAGACGAGCGGCG
ACAATCGATCGAATGCTCAGGGCTTCAGCATGCTATCAGACCTGCAACGC
GCCAAGAGACAGCATTGCCATCCCGATCAAATTCCACGGCATCAGAGGAC
GACGAGGACATCCAAAGCGACCTCGTGCCTTCGGCCAATACATTCATCCG
CAAGCTCTTTCAAATGGTCACGAGTGAGAACAATGACATCATCTCCTTTA
CTCCAG back to top
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