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Properties
| Property Name | Value |
|---|
| Product | autophagy regulatory protein |
| Orig transcript id | gnl|cribi|Naga_101823g1.9578.mrna |
| Orig protein id | gnl|cribi|Naga_101823g1.9578 |
| Gene | ATG2 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:251308..252896 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5974 ID=rna5974|Name=rna5974|organism=Nannochloropsis gaditana|type=mRNA|length=201bp
ATGGAGGAGGAGGGACAGATCGATTTCAAGATCGGTTTCTCCTCTCATCC
AGGAGCGCAGGTGGCGAAGCTGGACGTTCGTTTCCAGCGACCTCCCCCTC
GGTGCGCTTGCGCCTCGACGTGTTCTCAGGGAGCCTGCACGCCTACGCCT
CGGACGGCAGTCTGGCGAGGGCGATGCCGTTTCATTCAAACGTCCGTTTA
A back to topprotein sequence of rna5974 >rna5974-protein ID=rna5974-protein|Name=rna5974|organism=Nannochloropsis gaditana|type=polypeptide|length=520bp
ALQFQVVVHDVSLRWRLFAGRDWGEREGRKALGGREGGREGEVRAPRGKH
LEELLDGGEGGRTPGRGQGRRRRRRRKSEGRQVGCMMEVCLSHARLQHAS
FMPGQTRAARSRVWVSDLCVLDRIISVQPRRVLGYWRSDREHPRDGTAPM
LQVDVSAWTPRYDASVVQGKGGGADAGGGGEGEGAGGREGSGEAPVEELT
LRVRLLPLRVLVDRHTIDFVSNFFALVDASARTSPPPSAGTSPALPLEHL
AFFQSVLVRPVKVKLDTQTRPLNLREVQRGNYAELLNLCPLKNVKLQLAA
VTLRGISGWAAIGEGVRESWVRDVTEKQMYRLLMGPSPIRSVFNMGSGVA
DLILLPLEHYRRDGRVFRGLRKGVIRCLRNVSIEALNASVGITRAVASTL
NDLVALEGGREGGREGGREGGQVWVQADLQPKGMREGLEHAYDTLSKGFS
TVAHTIIAVPIQEMERSGPQGSVRAVIRALPIAVVKPVVGVSEALSITLL
GVRNKLDPGSRREEEELWRV back to topmRNA from alignment at CM002467.1:251308..252896+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5974 ID=rna5974|Name=rna5974|organism=Nannochloropsis gaditana|type=mRNA|length=1589bp|location=Sequence derived from alignment at CM002467.1:251308..252896+ (Nannochloropsis gaditana)
GCCTTGCAGTTTCAAGTGGTGGTGCATGACGTCTCCCTTCGGTGGAGGTT
GTTCGCGGGGAGGGActggggagagagggaggggaggaaggcgttgggag
ggagggagggagggagggagggggaggttcgAGCGCCACGCGGGAAGCAC
CTGGAGGAGCTGttggacgggggggaaggagggaggacgccggggagggg
ccagggccggcggaggcggcggcggaggaagagcgagggcCGGCAAGTCG
GGTGCATGATGGAGGTGTGCCTGAGCCACGCCCGCCTGCAGCATGCGAGT
TTTATGCCCGGGCAGACACGGGCAGCGCGGAGCCGAGTGTGGGTGTCGGA
TCTCTGTGTCTTGGACCGAATCATCTCGGTGCAGCCGCGGCGGGTCTTGG
GCTACTGGCGCTCCGACAGGGAGCACCCCCGGGACGGAACGGCGCCCATG
CTCCAGGTGGACGTGTCGGCATGGACCCCTCGGTACGACGCCTCGGTggt
gcaggggaagggggggggggcggacgcgggggggggcggggaaggggaag
gggcaggcgggagggagggatcgggggaggcgccggtggaggagctgact
CTGAGGGTCCGGCTTCTGCCCCTCCGGGTCCTTGTGGACCGACACACGAT
CGACTTCGTGTCTAATTTTTTCGCCCTGGTCGACGCCTCCGCCcgtacct
cccccccgccctccgccggcacctcccctgccctccccttggAGCACCTG
GCTTTCTTCCAGtccgtcctcgtccgtccAGTGAAAGTGAAGCTCGACAC
GCAGACCCGGCCCCTCAACCTCCGGGAGGTGCAACGGGGGAATTACGCCG
AGCTTTTGAATTTGTGTCCATTGAAAAACGTCAAACTTCAACTGGCGGCC
GTTACGCTTCGGGGGATTTCGGGGTGGGCGGCGAttggggagggcgtgcg
ggAATCCTGGGTGCGGGACGTGACCGAGAAACAAATGTACCGCCTCCTGA
TGGGGCCCTccccgatccgatccgtcTTCAACATGGGTTCGGGCGTCGCA
GATTTGATATTGCTTCCCCTGGAGCACTACCGGAGGGATGGGCGGGTGTT
TCGAGGCTTGAGGAAAGGAGTGATCCGCTGCCTGCGCAACGTCAGCATTG
AGGCCTTGAACGCCTCGGTGGGGATAACCAGGGCGGTGGCTTCCACGCTG
AACGACCTGGTCgccctggagggagggcgggagggagggcgggagggagg
gcgggagggaggacaggtaTGGGTCCAAGCGGATTTGCAACCGAAAGGCA
TGCGGGAAGGTCTGGAGCACGCCTACGACACCTTAAGTAAGGGCTTCAGC
ACCGTAGCTCACACCATCATCGCCGTGCCGATCCAAGAGATGGAGCGGTC
GGGGCCCCAAGGGAGCGTGCGGGCCGTCATTCGCGCCCTGCCGATCGCGG
TGGTGAAGCCCGTGGTGGGGGTTTCGGAGGCACTCTCCATCACATTGCTG
GGGGTGCGGAACAAGCTGGATCCGGggagtcggagggaggaagaggagct
ctGGCgggtgtgagggagggagggagggagggagggagg back to topCoding sequence (CDS) from alignment at CM002467.1:251308..252896+ >rna5974 ID=rna5974|Name=rna5974|organism=Nannochloropsis gaditana|type=CDS|length=1563bp|location=Sequence derived from alignment at CM002467.1:251308..252896+ (Nannochloropsis gaditana)
GCCTTGCAGTTTCAAGTGGTGGTGCATGACGTCTCCCTTCGGTGGAGGTT
GTTCGCGGGGAGGGActggggagagagggaggggaggaaggcgttgggag
ggagggagggagggagggagggggaggttcgAGCGCCACGCGGGAAGCAC
CTGGAGGAGCTGttggacgggggggaaggagggaggacgccggggagggg
ccagggccggcggaggcggcggcggaggaagagcgagggcCGGCAAGTCG
GGTGCATGATGGAGGTGTGCCTGAGCCACGCCCGCCTGCAGCATGCGAGT
TTTATGCCCGGGCAGACACGGGCAGCGCGGAGCCGAGTGTGGGTGTCGGA
TCTCTGTGTCTTGGACCGAATCATCTCGGTGCAGCCGCGGCGGGTCTTGG
GCTACTGGCGCTCCGACAGGGAGCACCCCCGGGACGGAACGGCGCCCATG
CTCCAGGTGGACGTGTCGGCATGGACCCCTCGGTACGACGCCTCGGTggt
gcaggggaagggggggggggcggacgcgggggggggcggggaaggggaag
gggcaggcgggagggagggatcgggggaggcgccggtggaggagctgact
CTGAGGGTCCGGCTTCTGCCCCTCCGGGTCCTTGTGGACCGACACACGAT
CGACTTCGTGTCTAATTTTTTCGCCCTGGTCGACGCCTCCGCCcgtacct
cccccccgccctccgccggcacctcccctgccctccccttggAGCACCTG
GCTTTCTTCCAGtccgtcctcgtccgtccAGTGAAAGTGAAGCTCGACAC
GCAGACCCGGCCCCTCAACCTCCGGGAGGTGCAACGGGGGAATTACGCCG
AGCTTTTGAATTTGTGTCCATTGAAAAACGTCAAACTTCAACTGGCGGCC
GTTACGCTTCGGGGGATTTCGGGGTGGGCGGCGAttggggagggcgtgcg
ggAATCCTGGGTGCGGGACGTGACCGAGAAACAAATGTACCGCCTCCTGA
TGGGGCCCTccccgatccgatccgtcTTCAACATGGGTTCGGGCGTCGCA
GATTTGATATTGCTTCCCCTGGAGCACTACCGGAGGGATGGGCGGGTGTT
TCGAGGCTTGAGGAAAGGAGTGATCCGCTGCCTGCGCAACGTCAGCATTG
AGGCCTTGAACGCCTCGGTGGGGATAACCAGGGCGGTGGCTTCCACGCTG
AACGACCTGGTCgccctggagggagggcgggagggagggcgggagggagg
gcgggagggaggacaggtaTGGGTCCAAGCGGATTTGCAACCGAAAGGCA
TGCGGGAAGGTCTGGAGCACGCCTACGACACCTTAAGTAAGGGCTTCAGC
ACCGTAGCTCACACCATCATCGCCGTGCCGATCCAAGAGATGGAGCGGTC
GGGGCCCCAAGGGAGCGTGCGGGCCGTCATTCGCGCCCTGCCGATCGCGG
TGGTGAAGCCCGTGGTGGGGGTTTCGGAGGCACTCTCCATCACATTGCTG
GGGGTGCGGAACAAGCTGGATCCGGggagtcggagggaggaagaggagct
ctGGCgggtgtga back to top
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