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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100180g8.4033.mrna |
| Orig protein id | gnl|cribi|Naga_100180g8.4033 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:234883..237890 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5967 ID=rna5967|Name=rna5967|organism=Nannochloropsis gaditana|type=mRNA|length=4200bp
ATGAATGGCCAGAGGAAACATGTCGGTTCCCTCTTTTTCTGCCCGTGGAC
GACGTTGAAAGGAGGGTTTTATCTATTGCACGTGGCGTGGTGGACCAACG
ACCGTTGCTCATGCCGGCGTTCGACTGCAACTTTGCCTAGAAACGATTTG
GGACCGAAATTTGTGCGCACCCTTACAAAAAAAGCTCATAACACTCTTCA
CGACGTATATTCTGTCAAAACCAAGATGTGGCAGATGACATGGTGGCAGG
GATCCAAAAGGAAGCCGATGCCTTCGGGTAATGGAACACCAAAGAGGTAC
CTCCCGACAGAGAGCTCCTTGGAGGACAATAGAGAGGCGATGGACTATCG
GAAACTTGGCTACCAGGGGTCATCGGGTGGCGGAAGCAGCCCGGGAAGGA
ACGGAGACGTGCTCGCACACGGTGAACGTGGCCGGTCGCGGGCCTCTGAT
CCTGGTTGTCCTCAGCACCAAGACCATGCAACGGCGCCCGTATCACCCCT
CCTGGACAAAGCCGCGGTGGTCGTGCGAAACAATGCGACCGCCCTGGAAT
CCTTGTCGGCACGTGGGATCTGGCTGCTCCTCTTTCTCCCCTACCTGACC
CTCGCCCTCGCCCTCCTTATTGACGCCCATCCCCAATACCGTTTCACATC
CGGGTATGCGTTCCCAACGGGCGAAACCGTGGGGCCTTGCCACGGGGAGG
ACCACATCCACGATGGATGCGTGCGGGTGGTCAATGCCAACTACACCGCT
CTCTACTCGCCCCCGTTTCGGCTCCCCCTGAGGTCCACCATCCTGGCCGT
GGACGCTTTGGTAAATGCCCGCGCGCCTTTGACCCCTTTCGAGGGCCGCG
TGGAGCCAACACCGGCGAGGGAAAGACTGTTAACGACGCCAACGCCGGTC
CCTCTCCTTTCCGTTGCCCCTCCCTCCCCGACCCTGTCTGCCTCCACGCC
GTCCTCTTTCCCGCGTCCCTCCTCGCGTCCCCGCTTCCCGCTAGAACTTA
CGGAGGAAACGGACGACGACGACAGCAGCGAGGGGGGGGAACTCTCGGTC
ACAGCCAAGCTGGAGGTCCCCTTCCAAGACGGGTCGGGCTGGCGGCTTCT
CTGCCAAGGGCCGTCCGTCGGGTGGACCTGGGGGGAGGAAGGGGCGGAGG
GAGGGCGGAGGAAGGGGCGGAGGAGGCGCCTTGCCGCCCATGAACGGAGG
GAAAGGGCCCTGGCCCGTGCCCCTTCCCGCCAGCTTGAGGACCTGCCCGG
CTTCCCCCCTTCCTCCACGTCCTTCGCCGCCCGCCTCCTGACCGTAGTCT
TCGACGCGCCGGGCATGGAATACAGGGGCTTCCCCTCCTACCGACTCAGT
ATCGTCGTGGCCGGGCCCGCCGCCGTCAGCTTCGCCCCTCAACTTGGGTA
CCTCATCCATCACGACCGGTTCTCCTACCTCTACCTCCTCTTCCTCCTCC
GCGCCGCCCTCCTTCTCCTCACCCTCCTCGGCCTTTTTCGGTGGCACCGA
CGCCTGCGCCGAGAAAAGCCCGGCGGGCTTCGCACCTGGTTGCCCGAACA
GCATTACGTCGGCCTGGTCCTCCTCCCGGCCCTTTTCCTCTGGCAGAACC
CCTTCGCCCTCCTCCTCGGTTACTGGGGCCGACCGCCCTCCCTCCTCCTC
TTCCTCGCCGACCTGGCCAATGCTGCCGGGTATCTTACCATGCTCTTCGC
CTGGGTCTGCATCGTCGATGGCCTCCGCTGCTACGAGACTTCCAAGGAGG
TCTGGCGCCGGGCCCTGGCCCTCTCCCCTCCTACCCGATCCCTCCCTCCC
AACCACCTCGCCCTACATACGGCCTCTTTCCCTTCCCCATCGGACGCCCA
CAATCCTTGGCAGCACCAGCAAAGCTTTGCCCAACCTCACCCCTCTCCTA
TTCCCGCCCCTCCCTCCCTCCGTCCCTCCTCCTCCTCCGCCCTTCCTTGG
CCTCCCAAGCACCACCCGCTCGGAGATTACTTCTCGGATTTCTTCCTCCC
TAAACTCGCGCTCTACCTCTTCTCCCTCTGTCTCACCCTCTTCCTCTGCG
TGCTCCGCTACCCTTCCAAATTTTTCCAGAGCCGCCCCCCTCTCTCTTCC
TCCACCACCTCTTCCCCTGCCTCCGTCGGCATCAATACCGAAGACTCTGG
CCTGCCCCCCTCCCTTCGCCGGGTCTATGCCCTCCTCTCCTTCCTCCTCG
TCCTCCTTTTAGCCGGCTGGTACCTTCTCTTCCTCTCCTCCGTCCTCCTC
ACCGGCCGGGCCCTGCGGCGACAGGCTTACCTGCGGACACGTTCCCAGCA
GCTGTCTTTCCGCTTCATCTCCCAGCAAGTCTTTCTCATCCTCTGCTGCA
AACTCACCCTCCTGGTCCTCGGCACCCTCCGCCTCGCGCGCCTTCTCTTT
GGGGTCGGGGCGGGGGGCGGGGGAGGGAAAAGCTGGGAGGGTGCCTTGTC
CGGATGGTCCCTCTACGCCACCTCCTCCTTTCAAGCGCCCATGGGCGAGC
TTCTCTTCATCAGCATCACCGCCTACCTGATGGCCTTCATTTTCTCGCCC
GCCACCCGCTGGTCGGGCTCGGACGTGGGGGGAGGAGGCTACCCACACGT
GAGCCTGGAGGCTGAGCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCTCCTCCTTCCAAAGCCTTCGGTCCAAGCTCCTCCCTTCCCCGAAACCC
ATCTTCTGCCTAGAAACCGCGTGCTGGCTCATGGAGGCCTCTTGGCAGGC
CTACTACGAACTGGACGCCCGTTCCCTCCCGTCCTCCCCCTCGCCCTCCT
CCCCGTCCTCCCTCCCGGCCTCCTCCCCGTCCTCCACCTCCTCCCTCCCG
GGGCGGATGGCCCTCGGCAATTTGAATGTGCGGATGGAGGGGTATGTCCA
CGACGAGGGCACCGATACGCGATCCGTCCTGGGACGGGTGGGAGGCAACG
AGGGAGGGGGAGGGGGAGGGCGCGGCCGAGGAAGGGGAGGAGGGTGCGGG
AGGAAAGGAGCCTTGCTGCTGGCCTTCCGGGGGACATTGTCCTCTCGAAA
CATGTTGACGGATTTGAAAATGCAACAGGTGGCTTTCCCCTCGGACAGGG
TGCTGCGAGTGGTGGAGGAGGGACTCTTGTCGGCCGTGGAAAGCGCGCTG
GCAAGGGAAGGGACGGAGTACCTGTATTGCACAGGGCACAGTTTAGGAGG
GGCTTTGGCGCAACTCGCCGCCTACGATCTAAGCATCAATTTCCCTGCGC
TCCGACACATTCAAGTCTACACGCTCGGGGCACCCCGGGTCGGAAATCCG
GCTTTTTCCTCGGCCTACGAAGCACGTGTGCCCGCCACTTTTCGCGTGGT
GGTTGACGGCGATCTGGTCCCGGGTATGCCCAAGATATTTGGTATGTACA
GGCACTCGGGGGTCGAGGTTTTGGTGGACGCAGAGAACGGGGGTAATTTG
ATCGTCTCCCCGTCCGCGGTGGAGAAATGGCTGCGTCTTCGTAATCGCAC
GAGTACCACGAATCATTCATTGACCACGTATCGGGATTGCATGGAGGCAT
GTTTTAGTCCAGATGACTTGGTGCATTACCTCCCGAAAGTGTTAGGACAG
GAAAACCGGACGTCCGCGGACGAGGATTTGCCCGAGTGGCTGAGGACTAA
GAACGGGCTTATCCACCATGCTTTCGCTTTGTACATGAGGAGAGTGCATA
TCTCGATGGTGAGATTCAACTGGTTACACACGTCTCGTGAAATATTTGTG
GGGAAACACAATAAAAAGGCCTCGGTATTCCATGCAGTCAAGCACCTACC
GGGCCCATTGATGGGGCTGGCTATGGAGGACGACGGAAAACGGAACACTT
GGACAGCGGACGAGGATAAGATTCTAGCCTCTTTGGTGGAGAAATATGGG
CCAAAGAAGTGGGGCATTGTCGCCACATATCTCCCCATGCGGAATGCGAA
GCAGTGTCATCAACGCTGGCATTACGTGCTGAAACCAAGCATTTCTCGAG
AGACGTGGACGGAGAAGGAGGATTATATAATCTACCACTATCAACGCCTA
TTGGGCAACAAATGGTCTCACATCGCTAAATACTTGTCGGGACGGACGGG
CTACGCGGTTCGAAATCGACATGCTTTCTTGGTTAAGCATTATAAGGGGG
GAAAGGTGCCGGTTCCTCCTGCCTCTTCGAGACGCACTTTCCGAGTTTGA back to topprotein sequence of rna5967 >rna5967-protein ID=rna5967-protein|Name=rna5967|organism=Nannochloropsis gaditana|type=polypeptide|length=736bp
MEKPEQHAVDKNDLPRHQLNRPARLSMELVDSPTNEPLPVTGSMKGNSDE
TNPSTSPMGTIRVMSERLGNSIYGKKERKKKADSAFSSSLRVITGPFISS
TTKTKVNVSSPLSREMSPPPHTPKKDGAVECEGSNVTPGEVDNSRDTSMS
SSLHDKLHSLGPGELEDLPLDSSKGVFESCAPSYFETDDDEERKDEPCFS
PKVRSYKSAGAGPGGSLLRPLSPIVLPVLRSPRVRRIFGPEKTDRVATLF
ESSSTTEPQHPFASSSVPSSFPSAATLSTEAPARPLGSAHVASSSVLPPK
QPPATFSRVTPMPCRDEATAPPLPHPSSSASSAHKPPRLPPSLLASAAAT
NPTTSQSRRPSLYYVGGHNNTVLQQNFTVALGLCLLACGLSQAGLEWYTM
VLGSDYTTWWAGLLCAGLGLATMVSQRRRTIVSGDHDNVDRAASVQALKR
LVMRGLYALLLGGGAGAVVTALFFDLDFLDRLEHLDMCGASSDKLVLDNG
LVLGDTLGNACAFSSGCACVQFTHPLPEGEVACLNFPRSASSSCAKAPFL
IASIVRVSVWLMGGILFFMTILLLRGRAAVCSAYGERANQAEGAKGGISK
DSERVVSSFGSSKVRSMSAANRRRSLSQEQPPPQGQVEGRQSWWQTGDED
SSSDEEGEEEVVMVVQREKGKVGVALKPEMEPPRDGGRSHLLTPIPECHT
PMPEEEADGNGTRSRRSDADEPNRVVRSPPQEVEYI back to topmRNA from alignment at CM002467.1:234883..237890- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5967 ID=rna5967|Name=rna5967|organism=Nannochloropsis gaditana|type=mRNA|length=3008bp|location=Sequence derived from alignment at CM002467.1:234883..237890- (Nannochloropsis gaditana)
ATACAGAAGCACGCGCGGTACATATCCTCTGGGTGCTATTGCCCTCTCCT
TTGCCGGCTGCAGGAGTGGAGAATCGGTAGCTGTGATCGGATAAAGTTGA
AGTAAAGGAAGATTTATATCACCGCATTACGTTGTATTCAATTAAAATTT
GATTGACCGACAGGGTCAGGAATGGAAAAGCCTGAACAGCACGCAGTTGA
TAAGAATGATCTGCCCCGTCATCAATTGAACCGGCCGGCCAGGCTATCCA
TGGAACTTGTCGACTCACCCACGAATGAGCCTCTACCTGTCACTGGGAGC
ATGAAGGGTAATAGCGATGAGACTAACCCCAGCACGTCGCCGATGGGAAC
GATTCGCGTCATGTCAGAAAGACTAGGAAATTCTATCTACGGTAAAAAGG
AGAGGAAGAAGAAGGCCGACTCAGCTTTCTCTTCGTCATTGAGAGTTATC
ACAGGGCCTTTCATCTCGTCAACAACAAAAACCAAGGTGAATGTATCTTC
CCCGCTCTCTAGAGAAATGAGTCCCCCTCCACACACCCCTAAGAAGGATG
GGGCCGTGGAATGTGAAGGAAGTAACGTTACTCCCGGCGAAGTCGACAAC
AGCCGGGATACATCCATGAGCTCTTCTCTCCATGACAAGCTCCATTCACT
GGGGCCTGGAGAATTGGAAGATCTGCCCTTGGACAGTAGCAAAGGTGTTT
TCGAAAGCTGCGCTCCGTCCTATTTTGAGACCGACGACGACGAAGAGCGA
AAAGACGAACCTTGTTTCTCTCCTAAAGTAAGAAGTTACAAAAGTGCGGG
GGCAGGCCCTGGTGGATCCCTTCTTCGGCCTTTAAGTCCAATTGTCTTGC
CGGTGCTTCGCAGCCCGCGCGTGCGGCGGATCTTCGGGCCTGAAAAAACC
GACCGGGTCGCAACCCTCTTCGAAAGCTCCAGCACGACAGAGCCCCAGCA
TCCCTTCGCATCCTCTTCCGTACCTTCAAGCTTTCCATCGGCCGCCACAC
TGAGCACCGAGGCCCCGGCGAGACCCCTGGGATCCGCCCATGTCGCATCG
TCTTCTGTCTTGCCCCCCAAACAGCCCCCCGCCACCTTCTCCAGGGTGAC
TCCCATGCCCTGTCGCGACGAGGCCACTGCGCCTCCTTTGCCGCACCCAA
GCTCTTCTGCATCTTCTGCGCACAAGCCGCCTCGACTCCCGCCCTCATTG
CTCGCATCGGCAGCCGCTACAAATCCTACCACCAGCCAGTCCCGGCGGCC
GTCCCTCTATTACGTGGGGGGACACAACAATACCGTTTTGCAGCAAAATT
TCACCGTCGCCCTGGGCCTGTGCCTGCTTGCATGTGGACTCAGTCAAGCG
GGGTTGGAGTGGTACACGATGGTGCTCGGAAGCGACTATACCACTTGGTG
GGCAGGTTTGCTCTGTGCGGGGTTGGGGCTCGCGACCATGGTCTCGCAGA
GGCGGAGGACGATCGTCAGCGGCGACCACGATAACGTGGACCGGGCAGCA
TCGGTGCAGGCTCTGAAAAGGCTGGTAATGCGGGGGCTCTATGCCCTGTT
GCTGGGTGGGGGAGCGGGGGCGGTGGTGACTGCCCTCTTCTTCGACCTCG
ACTTCCTCGACAGGTTGGAGCACCTGGACATGTGCGGCGCCAGCTCGGAT
AAATTGGTCTTGGACAACGGCCTGGTCCTGGGGGACACCCTCGGCAATGC
GTGTGCTTTCTCTTCGGGCTGCGCCTGCGTCCAATTTACACACCCGCTCC
CTGAGGGGGAAGTAGCTTGTCTCAATTTTCCTCGTTCCGCCTCCAGCAGC
TGTGCGAAGGCGCCTTTCCTCATCGCTAGCATAGTGCGGGTCAGCGTCTG
GCTTATGGGCGGTATCTTGTTCTTCATGACCATCCTCCTACTCCGCGGCC
GGGCCGCAGTGTGCAGTGCGTACGGGGAAAGGGCCAACCAGGCGGAGGGC
GCGAAGGGCGGGATCAGCAAGGATTCGGAACGCGTAGTCTCTTCGTTTGG
AAGCAGCAAAGTCCGTTCCATGTCTGCGGCGAACAGGCGTCGCTCCCTCT
CCCAAGAACAGCCTCCCCCACAGGGGCAAGTGGAGGGGCGGCAATCCTGG
TGGCAGACCGGAGACGAGGACAGTAGCAGCGACGAGGAAGGCGAGGAAGA
GGTGGTGATGGTGGTGCAAAGGGAGAAGGGAAAGGTCGGAGTAGCCTTGA
AGCCTGAAATGGAGCCGCCGCGGGACGGGGGACGCAGCCACTTGTTGACA
CCCATCCCGGAATGCCACACCCCCATGCCAGAAGAAGAGGCAGACGGGAA
CGGGACCAGGTCGAGGAGGAGTGACGCTGACGAACCAAATCGGGTGGTAA
GGTCGCCCCCGCAAGAAGTGGAGTACATTTAACAAGCGCATGGCGTCGGC
TGGATTAGATAGGAAGGATTGTATTTTTCGGTGAGAGTCGAGTGGGACAC
TCTGCTCTTCAAAGTCTGAGCCAGCACGATGGCCTCCTTCATGGCCTATG
TTCATATTTCACGTAAGTTGATTGCATGGTTGATATTTATTGCAAAACTT
CAAACAAAAAAGGAGAACTGTACGTCCTTTCTGCCGTTGACTTCAATCCA
ACTTGAAGGGGTAGCCATCCCTTGGAAACAGAAAATAGTTACATGAACCT
TCCTTGTGACCCGTCAAAAGCTCGCCATCTAACATTTTTACAGCCTTCCA
CTCGCTTGTATATGCCTTTTAGATGGTTTTGGGTCGATCTTACAACGTGG
CACCCTTTTCGTATTGCAATGTCTTTAACATACTACCATAATAAACGCGT
TTCCTGATATTGCTGACATGAGTGTTGAGAACCAATTCAAGACATCCGTT
TGTCATAAATCGTCTATCAACGCATTCATCTCCCTCCAAATCGGGGAGAA
GACGCTTGTCAACGAGCCTCGATTTCCCAGTGACCCCTTCAGGACGCATA
TCGCTTGTATCCAACACTAGCTCTTAAGCTCCACAAGAAGAATGGATGGA
CGAGTGCC back to topCoding sequence (CDS) from alignment at CM002467.1:234883..237890- >rna5967 ID=rna5967|Name=rna5967|organism=Nannochloropsis gaditana|type=CDS|length=2211bp|location=Sequence derived from alignment at CM002467.1:234883..237890- (Nannochloropsis gaditana)
ATGGAAAAGCCTGAACAGCACGCAGTTGATAAGAATGATCTGCCCCGTCA
TCAATTGAACCGGCCGGCCAGGCTATCCATGGAACTTGTCGACTCACCCA
CGAATGAGCCTCTACCTGTCACTGGGAGCATGAAGGGTAATAGCGATGAG
ACTAACCCCAGCACGTCGCCGATGGGAACGATTCGCGTCATGTCAGAAAG
ACTAGGAAATTCTATCTACGGTAAAAAGGAGAGGAAGAAGAAGGCCGACT
CAGCTTTCTCTTCGTCATTGAGAGTTATCACAGGGCCTTTCATCTCGTCA
ACAACAAAAACCAAGGTGAATGTATCTTCCCCGCTCTCTAGAGAAATGAG
TCCCCCTCCACACACCCCTAAGAAGGATGGGGCCGTGGAATGTGAAGGAA
GTAACGTTACTCCCGGCGAAGTCGACAACAGCCGGGATACATCCATGAGC
TCTTCTCTCCATGACAAGCTCCATTCACTGGGGCCTGGAGAATTGGAAGA
TCTGCCCTTGGACAGTAGCAAAGGTGTTTTCGAAAGCTGCGCTCCGTCCT
ATTTTGAGACCGACGACGACGAAGAGCGAAAAGACGAACCTTGTTTCTCT
CCTAAAGTAAGAAGTTACAAAAGTGCGGGGGCAGGCCCTGGTGGATCCCT
TCTTCGGCCTTTAAGTCCAATTGTCTTGCCGGTGCTTCGCAGCCCGCGCG
TGCGGCGGATCTTCGGGCCTGAAAAAACCGACCGGGTCGCAACCCTCTTC
GAAAGCTCCAGCACGACAGAGCCCCAGCATCCCTTCGCATCCTCTTCCGT
ACCTTCAAGCTTTCCATCGGCCGCCACACTGAGCACCGAGGCCCCGGCGA
GACCCCTGGGATCCGCCCATGTCGCATCGTCTTCTGTCTTGCCCCCCAAA
CAGCCCCCCGCCACCTTCTCCAGGGTGACTCCCATGCCCTGTCGCGACGA
GGCCACTGCGCCTCCTTTGCCGCACCCAAGCTCTTCTGCATCTTCTGCGC
ACAAGCCGCCTCGACTCCCGCCCTCATTGCTCGCATCGGCAGCCGCTACA
AATCCTACCACCAGCCAGTCCCGGCGGCCGTCCCTCTATTACGTGGGGGG
ACACAACAATACCGTTTTGCAGCAAAATTTCACCGTCGCCCTGGGCCTGT
GCCTGCTTGCATGTGGACTCAGTCAAGCGGGGTTGGAGTGGTACACGATG
GTGCTCGGAAGCGACTATACCACTTGGTGGGCAGGTTTGCTCTGTGCGGG
GTTGGGGCTCGCGACCATGGTCTCGCAGAGGCGGAGGACGATCGTCAGCG
GCGACCACGATAACGTGGACCGGGCAGCATCGGTGCAGGCTCTGAAAAGG
CTGGTAATGCGGGGGCTCTATGCCCTGTTGCTGGGTGGGGGAGCGGGGGC
GGTGGTGACTGCCCTCTTCTTCGACCTCGACTTCCTCGACAGGTTGGAGC
ACCTGGACATGTGCGGCGCCAGCTCGGATAAATTGGTCTTGGACAACGGC
CTGGTCCTGGGGGACACCCTCGGCAATGCGTGTGCTTTCTCTTCGGGCTG
CGCCTGCGTCCAATTTACACACCCGCTCCCTGAGGGGGAAGTAGCTTGTC
TCAATTTTCCTCGTTCCGCCTCCAGCAGCTGTGCGAAGGCGCCTTTCCTC
ATCGCTAGCATAGTGCGGGTCAGCGTCTGGCTTATGGGCGGTATCTTGTT
CTTCATGACCATCCTCCTACTCCGCGGCCGGGCCGCAGTGTGCAGTGCGT
ACGGGGAAAGGGCCAACCAGGCGGAGGGCGCGAAGGGCGGGATCAGCAAG
GATTCGGAACGCGTAGTCTCTTCGTTTGGAAGCAGCAAAGTCCGTTCCAT
GTCTGCGGCGAACAGGCGTCGCTCCCTCTCCCAAGAACAGCCTCCCCCAC
AGGGGCAAGTGGAGGGGCGGCAATCCTGGTGGCAGACCGGAGACGAGGAC
AGTAGCAGCGACGAGGAAGGCGAGGAAGAGGTGGTGATGGTGGTGCAAAG
GGAGAAGGGAAAGGTCGGAGTAGCCTTGAAGCCTGAAATGGAGCCGCCGC
GGGACGGGGGACGCAGCCACTTGTTGACACCCATCCCGGAATGCCACACC
CCCATGCCAGAAGAAGAGGCAGACGGGAACGGGACCAGGTCGAGGAGGAG
TGACGCTGACGAACCAAATCGGGTGGTAAGGTCGCCCCCGCAAGAAGTGG
AGTACATTTAA back to top
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