|
|
Properties
| Property Name | Value |
|---|
| Product | asparagine synthase |
| Orig transcript id | gnl|cribi|Naga_100459g2.450.mrna |
| Orig protein id | gnl|cribi|Naga_100459g2.450 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:207738..209246 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5960 ID=rna5960|Name=rna5960|organism=Nannochloropsis gaditana|type=mRNA|length=1367bp
TGGTCGCTGTAAAAGCTTCATTTCTTTGTTCCCCTTCTCCCAATAACACG
GAACATGTCCCTTTGCTAAGTCACATATCTATTATGAAAACAAATTCAGA
CGCTTTTGATGATTTAATTGAATTCGCATGCTCTCTATCGACCACCCCGC
GACCTCCGTGCTGCTTGAACGAGTTCTTGCATCGAATGCCATCAAAGAAT
ACGACACTGCAGCAATAATCTCTCGCCTTACATCGTCTCCTCCGATCAGC
CTCGATGAAGTCAACTACCAAGATGAGCAGGGTCGAAGTCCTTTGGGAGT
TGCCGTCACAAGAGAAGGACAATCGGACCTTGTGAAGGCTTTGGTCGAGG
AAGGGAATGCTAGCCTGGGCCTGCGAGACGCTCGTCTTCGGACACCTTTA
TTGCTCGCTTCTGAGTTCAACCAGACTTCCAATGTCTTATATCTGCTAAA
AAAGCTCCAGGCGCAAAATAATAAATGGCGTTTGGCCGACGAACGCGATT
GCTTTCGCAGGGGGCCTTTGCATTATATGTGTAAGCATTGGAACGTGGAA
GGAGTACAAGCTCTCGTTTCCGTCGCGAGAGCGCAAGCTAGCGATGTTCA
GAATCCAGAAAATGGAAATTCAAGCAGTGTGCTATCACTGCTTGTGAACG
AGAAAACTAGCAGTGGAGAAACGCCGCTTTTTTGGCTCGCGCAATCCATT
GCTGATACCAATAAGAAATCGAAAGAGAAGAGGTTCGAACGGGCCGAAGC
CCACGACCACACGGACGAGGCAGTCGCACATTGCCACGACGACAAGGCAA
GCACGAATGATATTTTGGAAATTGCGCGGCTCCTTGTCGGAGCAGGAGCG
GAGCCAAGGGCTGGAAATGCCTTGGGCCAATCACCGGCGACATTGGTCAA
TCAAATGAGGGCAAGGGCAAAGGAGGGGAGGGTAGAGGAATTGAAAGAGG
GCCTTCAGGCGCTATTTTTGGCAGCCGAAGGAAAATGCGAGGATGAAGAG
GCGTGGGAGGTGAAAAAGGAGGACGTAAGGGGGGCTTCAGGAGTTGCTGT
CGAGGCTTCCCGGGACAGTCCTACGGGATCCTCCTCTACCCTGCCCGGTG
TCTCTCAGGGGCCTCAACCATGCAGGAATTCCTTGGCGTCCTTGCCCGCA
CGCCGAGAGGGGTCGTCGGCCACGCTTTCTCCAGGAGGCGTGGGGTTGGT
AAGGGCTTTGGGTGGGCAGACGAACGGAAGGCAGGGAGCCGCAGGGGGAG
GCCGGGGCCCTGGCGGGGCGGTGGGGAAAAAGCTCAGGATCAAAATGAGG
GCACCCACAGGGGAACAGGATGCCAAGCAAGACAGAATATGAACGAAAAT
GGTCACAAGTGTAAACA back to topprotein sequence of rna5960 >rna5960-protein ID=rna5960-protein|Name=rna5960|organism=Nannochloropsis gaditana|type=polypeptide|length=391bp
MSGNDNKTATGKQVRQLLHEAVHDIAENEFEKLCDPKKCIVLFSGGVDSS
ISLHLAASLLGVRHAITVLVQDTPANDAPWAEETPNLYSDIDHVILRPTL
AELLEKDMPFLVESIQSFDGMALRNSVCATHALRHAASLGFTYVLTGDAA
DELMGGYRFTHRYDAKAWSEQRATMVARMHFDSIQVGAALGMRVTSPYLY
KPFVDFCLQHLQKADCIGPFALRVAPTAPLEDGVVTGKLPLRRAFPELLS
SSRRKDPQEVGCGTTLLGAAPWATPPRPGYFDSRIKDEEFDREKERVLAA
YAVTLRDKEHLAYFLVFEEVFGRREDARALKEVRPERRLEVPGKSQNADD
PCPACRFALGAPTQTFCLTCGHYDEALRFRHAGTKGLKGDV back to topmRNA from alignment at CM002467.1:207738..209246+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5960 ID=rna5960|Name=rna5960|organism=Nannochloropsis gaditana|type=mRNA|length=1509bp|location=Sequence derived from alignment at CM002467.1:207738..209246+ (Nannochloropsis gaditana)
CACCAGGCAAATTACAGGGCAGAATCAGAAGTTCTTGAATTTTCGTACTG
ATACGGAGATCATCATCGTCCGAGCAAAGTCTTGACGTGGTCAAGTGCAG
GTAAACGCACCCTTCCACTCCATGTCCGGGAATGACAACAAAACAGCCAC
TGGAAAGCAGGTCCGTCAGCTCCTTCATGAAGCAGTCCATGATATTGCAG
AAAATGAGTTCGAAAAGCTGTGTgaccccaaaaaatgcatcGTTCTTTTC
TCGGGAGGAGTAGATTCGTCTATCTCCCTCCATCTAGCAGCCTCCTTGTT
GGGAGTACGACATGCAATTACCGTGCTTGTGCAAGATACTCCTGCCAATG
ACGCGCCCTGGGCCGAAGAAACCCCCAATCTTTATTCTGATATCGACCAT
GTCATATTGCGTCCTACATTGGCCGAGCTTTTGGAGAAAGATATGCCTTT
CTTGGTCGAAAGCATTCAGTCGTTTGATGGGATGGCGCTAAGAAACTCAG
TTTGCGCTACGCACGCCTTGCGCCACGCAGCTTCGTTGGGCTTCACATAT
GTCTTGACAGGAGACGCAGCCGACGAGCTGATGGGTGGGTACCGGTTCAC
GCATCGGTACGATGCAAAGGCCTGGTCAGAGCAACGCGCCACTATGGTCG
CGCGCATGCATTTTGACAGCATTCAAGTAGGGGCAGCCCTGGGAATGCGG
GTCACGTCTCCGTACCTTTACAAGCCCTTCGTTGACTTTTGTCTGCAGCA
TCTCCAGAAAGCAGACTGCATCGGTCCCTTTGCCTTGCGCGTCGCCCCCA
CCGCACCtctggaggacggggtggtaACGGGCAAGCTCCCGTTGCGTCGC
GCCTTTCCAGAGCTCTTGTCATCCTCCCGACGGAAAGATCCACAAGAAGT
CGGGTGTGGGACAACCCTGCTCGGAGCGGCTCCCTGGGCCAcgcctcctc
gaccagggTATTTCGATTCGCGGATCAAAGACGAGGAATTCGAtcgggag
aaggagcgggtgCTGGCCGCCTATGCCGTCACCCTCCGAGACAAAGAACA
CCTGGCCTATTTCCTTGTCTTTGAAGAGGTATTCGGGAGGCGCGAGGATG
CCAGAGCACTGAAGGAGGTGCGTCCAGAAAGGCGCTTGGAAGTTCCAGGG
AAATCGCAGAATGCGGATGACCCGTGTCCTGCCTGCCGCTTCGCTTTGGG
TGCGCCCACGCAGACCTTTTGCCTGACTTGCGGGCACTACGACGAGGCTT
TACGATTTCGACATGCTGGTACAAAGGGCCTGAAGGGAGATGTTTAAGAA
AATGCTTGGCCAGGATAGGtcgaggaaaatggaggacgCAGGGATGCTTG
ATTGATGAACGAGAATGCAATCTCTTTATGTCTTTGCGCATTCATTTCAG
TTCACAGACTATTTCTTTTCAAGGACAAGAGTAGGAACACCTGGTATGCA
GTGTCAGTCATCATCTTCATGTCAGTAACGCACCATTTCCGATCTCATCC
CCTCCAATc back to topCoding sequence (CDS) from alignment at CM002467.1:207738..209246+ >rna5960 ID=rna5960|Name=rna5960|organism=Nannochloropsis gaditana|type=CDS|length=1176bp|location=Sequence derived from alignment at CM002467.1:207738..209246+ (Nannochloropsis gaditana)
ATGTCCGGGAATGACAACAAAACAGCCACTGGAAAGCAGGTCCGTCAGCT
CCTTCATGAAGCAGTCCATGATATTGCAGAAAATGAGTTCGAAAAGCTGT
GTgaccccaaaaaatgcatcGTTCTTTTCTCGGGAGGAGTAGATTCGTCT
ATCTCCCTCCATCTAGCAGCCTCCTTGTTGGGAGTACGACATGCAATTAC
CGTGCTTGTGCAAGATACTCCTGCCAATGACGCGCCCTGGGCCGAAGAAA
CCCCCAATCTTTATTCTGATATCGACCATGTCATATTGCGTCCTACATTG
GCCGAGCTTTTGGAGAAAGATATGCCTTTCTTGGTCGAAAGCATTCAGTC
GTTTGATGGGATGGCGCTAAGAAACTCAGTTTGCGCTACGCACGCCTTGC
GCCACGCAGCTTCGTTGGGCTTCACATATGTCTTGACAGGAGACGCAGCC
GACGAGCTGATGGGTGGGTACCGGTTCACGCATCGGTACGATGCAAAGGC
CTGGTCAGAGCAACGCGCCACTATGGTCGCGCGCATGCATTTTGACAGCA
TTCAAGTAGGGGCAGCCCTGGGAATGCGGGTCACGTCTCCGTACCTTTAC
AAGCCCTTCGTTGACTTTTGTCTGCAGCATCTCCAGAAAGCAGACTGCAT
CGGTCCCTTTGCCTTGCGCGTCGCCCCCACCGCACCtctggaggacgggg
tggtaACGGGCAAGCTCCCGTTGCGTCGCGCCTTTCCAGAGCTCTTGTCA
TCCTCCCGACGGAAAGATCCACAAGAAGTCGGGTGTGGGACAACCCTGCT
CGGAGCGGCTCCCTGGGCCAcgcctcctcgaccagggTATTTCGATTCGC
GGATCAAAGACGAGGAATTCGAtcgggagaaggagcgggtgCTGGCCGCC
TATGCCGTCACCCTCCGAGACAAAGAACACCTGGCCTATTTCCTTGTCTT
TGAAGAGGTATTCGGGAGGCGCGAGGATGCCAGAGCACTGAAGGAGGTGC
GTCCAGAAAGGCGCTTGGAAGTTCCAGGGAAATCGCAGAATGCGGATGAC
CCGTGTCCTGCCTGCCGCTTCGCTTTGGGTGCGCCCACGCAGACCTTTTG
CCTGACTTGCGGGCACTACGACGAGGCTTTACGATTTCGACATGCTGGTA
CAAAGGGCCTGAAGGGAGATGTTTAA back to top
|