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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100272g5.10151.mrna |
| Orig protein id | gnl|cribi|Naga_100272g5.10151 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:192568..195180 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5952 ID=rna5952|Name=rna5952|organism=Nannochloropsis gaditana|type=mRNA|length=561bp
ATGATCAGCTCCAGGGATTTTGTCTTCGTCAGTCACAAAGTGCCTGCCGG
CGACTTGGGTGGCTCTTTCGGAGCCCAAGCATTTGTGCAGACCAACGCAG
CGAACACACTTCCTGAAAACAGCGGGGCCGTACGTGGGAATATCAACAGC
ATCATCCTCTTGGAACCCGTGGATGGGTACACCACACGTGTGCGCTACGT
GTGCGAGATCGAACCCAAAGGATGGCTGCCCACCATGGCGGTGGAAGCGG
CGGCCGACGACTTACCCGGTGTTTTGGGCGTGATGAAGGCGCATCTTGAA
TCTGAAGCGACGGAGGATGCAGAGGCGCTGGTTCGGAGACGAGCAAGCCT
CCGGGAGAAAGATCACACGCATCCCCTTCTAGTTGACAGCGTGACCGCCA
GCAGAGAAGATCTTCTCGCCTTGAAGAAACTGCTCCAGACAAAGCTAGAG
GAAGCGAAACGCGATGAGAAGAAATTAAATCTGAGCCTAGCGGAATTGAA
AAGCAAGATACAGAACGATCTTAAGAAGGTAGAGGCGAGGTTGAGGGCAG
GTGGAAAGTGA back to topprotein sequence of rna5952 >rna5952-protein ID=rna5952-protein|Name=rna5952|organism=Nannochloropsis gaditana|type=polypeptide|length=569bp
MDVDESVPSRPLSPPSPSTSKHTRIYEKQFHWWSAHRWADRVKAARGRAE
IEFEEAIAYTFKPHFFTRDSHADNGRNTATAGKEVAGPTSPVSPHIERQA
RKHVERHQKAREIQQAAIGAIHASTGTQRGRSPVRRSSSTSYVAVAAGQG
RIKTDVPVEGLNPLPLLPPSAVPDKDSGSHTLEDPRLRPGRSQARPIFKS
TSLSPQRQLPRSLLEETNYLKPTASWIQHHLQQSAMPSPPTGSGSLREVF
LDLSPNHQPFGPSSAPPSLTPSPASFPISRPRPTTPTSPTDIKPSHMPPQ
SSSASEKEPRAGEKEGKSGTRGKANPHQPRHGPEHAENDRTTETVHDRDH
ADTWTRGGAKGGRKDHGAKFWGQLQSARQAWAQERRQLLTVIELQQQAMA
TKKSAGTVDMANAVTSLSRRVETMEKGREKDREELNGTLGRLIRAVEACS
VDLKRLAPQPSFSANQAEKWQPQQQPEQSARKKIWRQGRAAEHGQGPVPT
SPSAFVFLSSLSKSLQASKKGDRNRHAPASPQSSACAASSNTSSTSPLSH
GHLTGQADVISHDTQVTRI back to topmRNA from alignment at CM002467.1:192568..195180+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5952 ID=rna5952|Name=rna5952|organism=Nannochloropsis gaditana|type=mRNA|length=2613bp|location=Sequence derived from alignment at CM002467.1:192568..195180+ (Nannochloropsis gaditana)
TCGTAGCAGAAATGAAATAAATTCTATGAAAATCCAAATCAAACTTCAAA
AATACAGGGCGTGAATCGGACATCTGACCGATTATTGGTTGCGAGTGAGA
GTCGCGCAAAGCTTACCTCTGTATGGTCGTACTTCACCGGTTTTATCAAC
GCCTTGATGAGATTTGGCGCCAAGATCGGTTTTACTCCATATAGTTGCAT
ATTCTGATTATGGACGTCGATGAGTCTGTACCATCACGACCTTtatcgcc
tccttcgccttccacaTCTAAGCACACGAGGATTTACGAGAAGCAGTTCC
ACTGGTGGAGTGCGCACCGGTGGGCTGATCGTGTCAAAGCAGCACGAGGA
CGCGCCGAAATCGAATTTGAGGAAGCCATTGCATATACTTTTAAACCGCA
TTTCTTTACCAGAGATTCACACGCTGATAACGGCCGTAATACCGCCACGG
CCGGTAAGGAAGTGGCGGGTCCCACCTCGCCGGTCTCACCTCACATTGAA
CGGCAAGCCCGCAAGCACGTCGAGCGGCACcaaaaagcgcgcgaaaTACA
ACAAGCTGCCATTGGAGCTATCCATGCCTCCACAGGCACCCAGCGAGGTC
GATCACCTGTGCGgaggtcctcctccacctcctacgtcgccgtcgccgcg
gggcagggaaggatcAAAACTGACGTTCCGGTTGAAGGTCTGAACCCGCT
CCCACTCCTGCCTCCAAGCGCTGTTCCTGACAAAGATTCAGGAAGTCATA
CCCTGGAAGATCCCAGACTGCGACCAGGACGCAGCCAGGCACGTCCTATT
TTCAAAAGTACCAGCCTGAGCCCACAGCGTCAACTGCCGCGAAGCTTGCT
TGAAGAGACCAATTACCTGAAACCCACTGCATCCTGGATTCAGCATCACC
TCCAACAAAGCGCCATGCCATCGCCACCCACAGGAAGCGGCTCCCTCCGG
GAAGTCTTCCTTGACCTATCCCCCAATCATCAGCCCTTCggtccttcctc
cgcccctccctccctcacgccctctcccgcgtccttccccattTCTCGAC
CGCGGCCGACGACTCCTACCTCGCCTACAGACATCAAACCCTCCCACATG
CCCCCGCAGTCGTCAAGCGCCAGCGAAAAGGAACCACGggccggggagaa
ggagggaaaatccgggacgaggggaaaggcgaatCCTCACCAACCCAGGC
ATGGGCCCGAACACGCCGAGAACGACCGGACGACGGAGACCGTCCATGAC
AGGGATCATGCCGACACGtggacaagaggaggggcaaaagggggaagaaa
ggatcACGGGGCCAAATTTTGGGGACAGCTGCAAAGCGCCCGCCAAGCCT
GGGCCCAAGAGCGGCGACAGTTACTGACGGTTATAGAACTTCAACAACAA
GCCATGGCCACCAAAAAGAGCGCAGGGACTGTAGACATGGCCAACGCCGT
AACTTCCTTATCCAGGCGCGTGGAGACCATGGAAaaggggcgggaaaagg
acagggaggagctAAACGGCACCTTAGGACGTCTGAtccgggcggtggag
gcctgcTCGGTCGATTTGAAGCGTCTGGCGCctcagccctccttctcggc
gaACCAAGCAGAAAAATGGCAGCCTCAGCAGCAGCCAGAGCAAAGCGCGC
GGAAAAAAATCTGGCGGCAAGGACGTGCAGCCGAGCACGGACAGGGGCCG
GtgcccacctctccctccgccttcgtcttcctttcttccctttccaaaAG
TCTTCAGGCCTCTAAGAAGGGAGATAGAAACAGACATGCACCAGCCAGTC
CCCAATCTTCGGCTTGCGCGGCCAGTTCCAATACCTCTTCTACATCCCCT
CTCTCACACGGGCATCTCACCGGGCAAGCTGATGTTATCAGCCACGACAC
GCAGGTCACAAGGATCTAGCGCAGAACGCAAAGAGCTACTTAATTCATTT
GTGCTTTTGACATTTACTTATTTGAAAAAGACTTGTGGTGAGCCTGGCCA
CGAAGACGCCAAACCTTTCAGGTCCagcggagggaaaagagaaggaggca
tgtTGTAGTTTTGATTTCCCGGAGATTAGCGAGGTGGAAGGGCACGCAGT
GCCACATAGACATCGATTGCGCTTTCCTGTTTGTGGAATATTCCCTACCC
ATTACATGCATGTATgactgaaggaggaggagagaaactGTGGGAAGGAT
TTGGAGAAAAGGGACTGAACGCACCCTATGTCGAGGACGTTTTGCATAGT
CTTCACGTCCGACGGTCAGAGGAAAGATGTGAGGCAAGGAGAAATGTAGA
TAGACGTGATACTTTTTTAATTCTGAGTTGCTTCCACGCACACGAGCGTT
TGCTGACGATATGTAAGACGAAGGATGGAATAGGGCTTTTCCAATAACGA
GGTCGAACTCTTGCTGAGTCCTTTGGAAGCATGCAAATCTATGCAATTCA
AAAATGAGCCATAGAAGAACAAGCAACGATGATGCATCATCGGAAAGCTT
CAGGTCAGGGAATTGATTGCATTATGTGACCGttgtggaaaagaaaaagg
gaagatcCGCGCACATCAAATCAATGGTTAATGGAAAGAAGCTAAATCTT
TCGGCAGTAATTT back to topCoding sequence (CDS) from alignment at CM002467.1:192568..195180+ >rna5952 ID=rna5952|Name=rna5952|organism=Nannochloropsis gaditana|type=CDS|length=1710bp|location=Sequence derived from alignment at CM002467.1:192568..195180+ (Nannochloropsis gaditana)
ATGGACGTCGATGAGTCTGTACCATCACGACCTTtatcgcctccttcgcc
ttccacaTCTAAGCACACGAGGATTTACGAGAAGCAGTTCCACTGGTGGA
GTGCGCACCGGTGGGCTGATCGTGTCAAAGCAGCACGAGGACGCGCCGAA
ATCGAATTTGAGGAAGCCATTGCATATACTTTTAAACCGCATTTCTTTAC
CAGAGATTCACACGCTGATAACGGCCGTAATACCGCCACGGCCGGTAAGG
AAGTGGCGGGTCCCACCTCGCCGGTCTCACCTCACATTGAACGGCAAGCC
CGCAAGCACGTCGAGCGGCACcaaaaagcgcgcgaaaTACAACAAGCTGC
CATTGGAGCTATCCATGCCTCCACAGGCACCCAGCGAGGTCGATCACCTG
TGCGgaggtcctcctccacctcctacgtcgccgtcgccgcggggcaggga
aggatcAAAACTGACGTTCCGGTTGAAGGTCTGAACCCGCTCCCACTCCT
GCCTCCAAGCGCTGTTCCTGACAAAGATTCAGGAAGTCATACCCTGGAAG
ATCCCAGACTGCGACCAGGACGCAGCCAGGCACGTCCTATTTTCAAAAGT
ACCAGCCTGAGCCCACAGCGTCAACTGCCGCGAAGCTTGCTTGAAGAGAC
CAATTACCTGAAACCCACTGCATCCTGGATTCAGCATCACCTCCAACAAA
GCGCCATGCCATCGCCACCCACAGGAAGCGGCTCCCTCCGGGAAGTCTTC
CTTGACCTATCCCCCAATCATCAGCCCTTCggtccttcctccgcccctcc
ctccctcacgccctctcccgcgtccttccccattTCTCGACCGCGGCCGA
CGACTCCTACCTCGCCTACAGACATCAAACCCTCCCACATGCCCCCGCAG
TCGTCAAGCGCCAGCGAAAAGGAACCACGggccggggagaaggagggaaa
atccgggacgaggggaaaggcgaatCCTCACCAACCCAGGCATGGGCCCG
AACACGCCGAGAACGACCGGACGACGGAGACCGTCCATGACAGGGATCAT
GCCGACACGtggacaagaggaggggcaaaagggggaagaaaggatcACGG
GGCCAAATTTTGGGGACAGCTGCAAAGCGCCCGCCAAGCCTGGGCCCAAG
AGCGGCGACAGTTACTGACGGTTATAGAACTTCAACAACAAGCCATGGCC
ACCAAAAAGAGCGCAGGGACTGTAGACATGGCCAACGCCGTAACTTCCTT
ATCCAGGCGCGTGGAGACCATGGAAaaggggcgggaaaaggacagggagg
agctAAACGGCACCTTAGGACGTCTGAtccgggcggtggaggcctgcTCG
GTCGATTTGAAGCGTCTGGCGCctcagccctccttctcggcgaACCAAGC
AGAAAAATGGCAGCCTCAGCAGCAGCCAGAGCAAAGCGCGCGGAAAAAAA
TCTGGCGGCAAGGACGTGCAGCCGAGCACGGACAGGGGCCGGtgcccacc
tctccctccgccttcgtcttcctttcttccctttccaaaAGTCTTCAGGC
CTCTAAGAAGGGAGATAGAAACAGACATGCACCAGCCAGTCCCCAATCTT
CGGCTTGCGCGGCCAGTTCCAATACCTCTTCTACATCCCCTCTCTCACAC
GGGCATCTCACCGGGCAAGCTGATGTTATCAGCCACGACACGCAGGTCAC
AAGGATCTAG back to top
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