Properties
| Property Name | Value |
|---|
| Product | l-serine ammonia-lyase |
| Orig transcript id | gnl|cribi|Naga_100272g2.10155.mrna |
| Orig protein id | gnl|cribi|Naga_100272g2.10155 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:184918..186822 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5949 ID=rna5949|Name=rna5949|organism=Nannochloropsis gaditana|type=mRNA|length=1500bp
TCGACACACCGTATTCACCCGTTCAACCCCATGATGAACGGAAAATAATC
CCGATACAGGCATACAGGCTGCCCGTCCGTCCTTCGATTCCCTTGGTGCG
GCGCGATGAAGCTTTTTTCCATCCTTATGCTCGCGGCCACGGCTTCTGCC
TTCCTCCCTCCCCTTCCTCCCTCGACCCCAACCTTCCGGCCATCCACGTC
CTTGGGCATGTCCTCCTTGCTCATGGACGAAAACGCGGTGGCAGACCGCA
TTAAGGACGGACTGCTCATTCGCTACATGCCCGAGGATATTCACAGGGTG
CTCGCCTCCTGGAACCGCATGGTGGAGAACCAGCCGTTCGAGGACAAGGA
GGCGCAGCGCTTCGCGACCTCGTACATTGAGGGGCTGGAGGCAAAGCCAT
GGCACGATGTCTCCAAGTTCCCCTGGCTGCAAAAGCTTGAGGAGAATGCG
GGGGTGGTGCAGCAGGAGCTGAAAGAGGCCTTGGCTATGGGAGAGATGCT
CGAGAAAACGGGGAACAACGTGTGGGTGGGCGCTCTGACCTCTGAGGGGG
CGGCATACGGGCCCGACTGGAAGACCTTGGTTCTGCAGGACCGGGCTTGG
GACGAGACCAATGCCCGAATCTTCCCCAAAACCGTCCAGCTTCTTCGGGA
AATTGGGGCCCCCACGGTGGAGGTCTTCTTTGCCAAGCAGAAGGGAAAGA
CGGGGATCCAGCCGCATTCGGACGGCTGCAACTTCGTCTTGACGGCTCAC
CTGGGTGTGGACGTGCCGGAGGGGGAGTGTTGGATCAAGGTGGGGGGGCA
GAAGGAGGAATGGCGGAACGGGAAGGCTCTGGCCTTCGACACGCACTACT
TCCACGAGACGGGCAATGCCAGCGACAAGGACCGTTACGTGCTTTTGATG
CGGTTTTGGCACCCTGGTGTCACGCCCAAGGAGCGGGAGGCGTTGCAGTA
CGTGTTTGACGCCCTGGATGGGCCCCAGGCGCAAACGGACATGGATTTTG
AATATTTGAACGGGCTCGCCGAAGCCCAGCTGGCGAGTCGACGGGTGGAG
GAGGTTGAGGAGGATGGGTGAGGGGTAAGGCAATGGAGAGGAGGGAGGAG
GCAACGGTGGGAATGGAAGGAGGAGCGGCAGCGGGCATGTAAGGGGGGGG
GGGTTGACGGGAATGCGGGAGGAGGAGGATGATGGGTAGGAAGATCTGGG
AGGTAAAAGAAGGGGCGGTGACGCTCGCCTCGGAAAAACGCTGACAATGA
AGGCTGTTGCAGGCCCTCCTGCTCGAGGAAAGAGGAGTGGGGAGGGAGAG
GAAATGGTTTTTTGAATTTTGATTGAACGAGGATGAATTGTGTACTGAGA
GTTGACGATGACTTGGGAAGTGCGGGGGAACGGGGTGAAAGGAGAAGGGC
TTGAGGGATGACGGAAGGTGTCTCAGAGAGGCAGAGGCGGGAGGCGGGAA
GCGTCATGAAAGAAGAGTGAGGCCTTCGACCGTCGATCGCTGCGAGACTC back to topprotein sequence of rna5949 >rna5949-protein ID=rna5949-protein|Name=rna5949|organism=Nannochloropsis gaditana|type=polypeptide|length=429bp
MVLCTGFLKMIGTASVALTGSTTGLSSRGLTTLSYVPPSASPTIMADITT
NPSTSSTPAAPSPGIAATGTGARRSPGKEAMRVKSPLIYSHPMSSLENAP
PIYLKLDALQPSGSFKDRGMATLCSTLQRQGARRLVSSSGGNAGLSAALC
GRILGMPVQVIVPSTTKPLMLEKIRAQGAKVEVFGKNWNEADARARWVVE
EGGREGGPEAVAYIPPYDHPLLWEGHSTLVDELVEGGREGGMEEAPAAIV
ASVGGGGLLCGIYEGLSRYEGRAGWEDVGVVGVETEGAASFAAGLAAGEV
VRLTEIQTVATSLGALEVTPRALEYARSGGRAGGRDGGQDKGPRLTLSEV
VTDAEAVQACRAFLRDHRLLVEPACGAALALVYSPRLRKRLKAWSAAKGG
RPVVIVVCGGSGITPEILVEMERGLGVGS back to topmRNA from alignment at CM002467.1:184918..186822+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5949 ID=rna5949|Name=rna5949|organism=Nannochloropsis gaditana|type=mRNA|length=1905bp|location=Sequence derived from alignment at CM002467.1:184918..186822+ (Nannochloropsis gaditana)
AGAACGTCAGTGGTGGGCCCTAGGCATACATGGCGTATATTTGCGAGGCC
GCATTTATACCTGATAGAATCCCGTCTGGTCATATctgtcttcttttccc
taCGTCGTCCAATTTCACAAGATGATAACACGGGCCCCCGGGAATCACTT
GCAtattcccctttctttttgcatGAGGTGTATTTCCCCTAAGACTGTCC
GACCCCCTCGTATGTCGCCGTCCTCgcttcatctccttcacaGTTTCCGC
ATCAGAATGTAGCACGTAAGTTTTTTACACCGTAAAACTTTTTTTGACCG
TTTTCTCCACCGTCTTTTTTTGACGACAGGGGGGTTGGGTGCCGACAGag
cctttcttcctcttccacacgTCGAGCTCTCCTTAACCTCCCTAGCGCAG
CAATATCTCCGTAAAAGCGCCATGGTCCTGTGCACGGGGTTTCTGAAGAT
GATTGGGACAGCCTCCGTCGCCTTGACTGGGAGCACAACGGGCTTGTCCA
GCCGAGGGCTCACCACCTTATCCTACGTACCGCCCTCAGCCTCTCCTACT
ATCATGGCCGATATCACGACAAACCCATCCACAAGCTCGACACCAGCGGC
GCCAAGCCCAGGGATCGCAGCCACGGGAACTGGTGCACGAAGAAGcccgg
gaaaagaggcgatgCGAGTAAAGTCCCCTCTCATCTATTCCCACCCCATG
TCTAGCCTGGAGAACGTACGTCCTTCACCGTATGCCCAGAGAAtcaggcc
cctccctccttccctccctccctccctccctcattccctccctccttccc
tccttccttccttcccttcttcccttactccttccctccctccttccctc
gcccccctcgcaCTCACTGTATCCCCTCTTGCCGCGCATGTTTGCCAGGC
ACCGCCCATCTATCTGAAGCTGGACGCATTGCAACCCTCTGGCTCGTTCA
AAGACCGGGGTATGGCCACCTTGTGTTCCACGTTGCAACGCCAGGGTGCC
CGACGCCTGGTCTCTTCCTCGGGCGGCAACGCTGGCCTCTCCGCCGCCCT
GTGCGGCCGTATCTTGGGCATGCCAGTACAGGTCATCGTCCCGTCCACGA
CGAAACCCTTGATGTTGGAGAAAATTCGGGCCCAGGGGGCAAAAGTGGAG
GTGTTTGGGAAAAATTGGAACGAAGCCGACGCCCGTGCCCggtgggtggt
ggaggagggagggagggagggagggcccgagGCGGTGGCCTATATCCCTC
CCTACGACCATCCCTTGTTGTGGGAGGGGCACAGCACGCTGGTGGATGAa
ttggtggagggaggaagggagggcgggatggaggaagcgccgGCGGCCAT
CGTGGCgagcgtgggggggggggggttgttGTGTGGGATTTACGAAGGGT
TGAGTCGGTACGAAGGCCGGGCGGGCTGGGAGGACGTAggggtggtgggc
gtggaAACCGAGGGCGCCGCGTCCTTTGCGGCTGGTCTGGCGGCGGGTGA
GGTAGTGAGATTAACGGAAATTCAAACGGTGGCCACGTCTCTGGGGGCGT
TGGAAGTCACGCCTCGGGCATTGGAGTACGCGAgaagcggagggcgggcg
ggagggcgggacggagggcaggACAAAGGGCCACGCCTCACCCTCAGTGA
GGTGGTAACGGATGCGGAGGCCGTGCAAGCCTGTCGGGCTTTCCTCCGGG
ACCATCGGCTCTTGGTGGAGCCGGCGTGCGGTGCGGCGTTGGCCCTCGTG
TACTCTCCCCGGCTGCGGAAACGTTTGAAAGCCTGGTCGGCGgccaaggg
gggaaggccggtgGTGATCGTGGTGTGTGGGGGGAGTGGGATCACCCCCG
AAATATTGGTAGAAATGGAGAGAGGGTTGGGCGTGGGgagttgagggagg
gaggg back to topCoding sequence (CDS) from alignment at CM002467.1:184918..186822+ >rna5949 ID=rna5949|Name=rna5949|organism=Nannochloropsis gaditana|type=CDS|length=2580bp|location=Sequence derived from alignment at CM002467.1:184918..186822+ (Nannochloropsis gaditana)
ATGGTCCTGTGCACGGGGTTTCTGAAGATGATTGGGACAGCCTCCGTCGC
CTTGACTGGGAGCACAACGGGCTTGTCCAGCCGAGGGCTCACCACCTTAT
CCTACGTACCGCCCTCAGCCTCTCCTACTATCATGGCCGATATCACGACA
AACCCATCCACAAGCTCGACACCAGCGGCGCCAAGCCCAGGGATCGCAGC
CACGGGAACTGGTGCACGAAGAAGcccgggaaaagaggcgatgCGAGTAA
AGTCCCCTCTCATCTATTCCCACCCCATGTCTAGCCTGGAGAACGCACCG
CCCATCTATCTGAAGCTGGACGCATTGCAACCCTCTGGCTCGTTCAAAGA
CCGGGGTATGGCCACCTTGTGTTCCACGTTGCAACGCCAGGGTGCCCGAC
GCCTGGTCTCTTCCTCGGGCGGCAACGCTGGCCTCTCCGCCGCCCTGTGC
GGCCGTATCTTGGGCATGCCAGTACAGGTCATCGTCCCGTCCACGACGAA
ACCCTTGATGTTGGAGAAAATTCGGGCCCAGGGGGCAAAAGTGGAGGTGT
TTGGGAAAAATTGGAACGAAGCCGACGCCCGTGCCCggtgggtggtggag
gagggagggagggagggagggcccgagGCGGTGGCCTATATCCCTCCCTA
CGACCATCCCTTGTTGTGGGAGGGGCACAGCACGCTGGTGGATGAattgg
tggagggaggaagggagggcgggatggaggaagcgccgGCGGCCATCGTG
GCgagcgtgggggggggggggttgttGTGTGGGATTTACGAAGGGTTGAG
TCGGTACGAAGGCCGGGCGGGCTGGGAGGACGTAggggtggtgggcgtgg
aAACCGAGGGCGCCGCGTCCTTTGCGGCTGGTCTGGCGGCGGGTGAGGTA
GTGAGATTAACGGAAATTCAAACGGTGGCCACGTCTCTGGGGGCGTTGGA
AGTCACGCCTCGGGCATTGGAGTACGCGAgaagcggagggcgggcgggag
ggcgggacggagggcaggACAAAGGGCCACGCCTCACCCTCAGTGAGGTG
GTAACGGATGCGGAGGCCGTGCAAGCCTGTCGGGCTTTCCTCCGGGACCA
TCGGCTCTTGGTGGAGCCGGCGTGCGGTGCGGCGTTGGCCCTCGTGTACT
CTCCCCGGCTGCGGAAACGTTTGAAAGCCTGGTCGGCGgccaagggggga
aggccggtgGTGATCGTGGTGTGTGGGGGGAGTGGGATCACCCCCGAAAT
ATTGGTAGAAATGGAGAGAGGGTTGGGCGTGGGgagttgaATGGTCCTGT
GCACGGGGTTTCTGAAGATGATTGGGACAGCCTCCGTCGCCTTGACTGGG
AGCACAACGGGCTTGTCCAGCCGAGGGCTCACCACCTTATCCTACGTACC
GCCCTCAGCCTCTCCTACTATCATGGCCGATATCACGACAAACCCATCCA
CAAGCTCGACACCAGCGGCGCCAAGCCCAGGGATCGCAGCCACGGGAACT
GGTGCACGAAGAAGcccgggaaaagaggcgatgCGAGTAAAGTCCCCTCT
CATCTATTCCCACCCCATGTCTAGCCTGGAGAACGCACCGCCCATCTATC
TGAAGCTGGACGCATTGCAACCCTCTGGCTCGTTCAAAGACCGGGGTATG
GCCACCTTGTGTTCCACGTTGCAACGCCAGGGTGCCCGACGCCTGGTCTC
TTCCTCGGGCGGCAACGCTGGCCTCTCCGCCGCCCTGTGCGGCCGTATCT
TGGGCATGCCAGTACAGGTCATCGTCCCGTCCACGACGAAACCCTTGATG
TTGGAGAAAATTCGGGCCCAGGGGGCAAAAGTGGAGGTGTTTGGGAAAAA
TTGGAACGAAGCCGACGCCCGTGCCCggtgggtggtggaggagggaggga
gggagggagggcccgagGCGGTGGCCTATATCCCTCCCTACGACCATCCC
TTGTTGTGGGAGGGGCACAGCACGCTGGTGGATGAattggtggagggagg
aagggagggcgggatggaggaagcgccgGCGGCCATCGTGGCgagcgtgg
gggggggggggttgttGTGTGGGATTTACGAAGGGTTGAGTCGGTACGAA
GGCCGGGCGGGCTGGGAGGACGTAggggtggtgggcgtggaAACCGAGGG
CGCCGCGTCCTTTGCGGCTGGTCTGGCGGCGGGTGAGGTAGTGAGATTAA
CGGAAATTCAAACGGTGGCCACGTCTCTGGGGGCGTTGGAAGTCACGCCT
CGGGCATTGGAGTACGCGAgaagcggagggcgggcgggagggcgggacgg
agggcaggACAAAGGGCCACGCCTCACCCTCAGTGAGGTGGTAACGGATG
CGGAGGCCGTGCAAGCCTGTCGGGCTTTCCTCCGGGACCATCGGCTCTTG
GTGGAGCCGGCGTGCGGTGCGGCGTTGGCCCTCGTGTACTCTCCCCGGCT
GCGGAAACGTTTGAAAGCCTGGTCGGCGgccaaggggggaaggccggtgG
TGATCGTGGTGTGTGGGGGGAGTGGGATCACCCCCGAAATATTGGTAGAA
ATGGAGAGAGGGTTGGGCGTGGGgagttga back to top
|