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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100898g2.6007.mrna |
| Orig protein id | gnl|cribi|Naga_100898g2.6007 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:140287..142921 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5935 ID=rna5935|Name=rna5935|organism=Nannochloropsis gaditana|type=mRNA|length=538bp
GGTTTATCTTATCCCGCGACGCATAGAAAGCGACGAGCACAGCATGCCCG
CTCCACCTCCGCAGGTCCTCCCGCCCCTCCAGCCCCCCCGACCGCCGCAG
CCGTTGCAAACGGGGCTACACCCAGCACCTTACGGTCAAGAAAATGTTCC
CACACGCTTCCTTTACATATCTGGCATCGGAGATGCGTTAAAGACGGACT
TGAAGGAGCTTCGCACCCTCTTGGAGGGCTACGGCCCCCTGGATGACAGC
GAAGGGCTGGGTGTAGAGGCCCCGGCCACAAAAGGATTCGTGCGTGTGCG
TTTCATCCACGTGGAGAGCGCGCAGAGGGCGAAGGAGGCTTTGATAGGGG
CGGAGGGGGAAGGGAGGGAGGAGGCGGGAGGGGAAGGGAGGGAAGGAGGG
GTTACCGTGGGCGGGCGGCGGGTCAATCGGGTCCAGTATTCAGTGATGTG
GTCGGAAGAAGAGGAGGTAAGGGGGGAGGAAGGAGGGAATGCAGGTCACG
GGGCCGCAGTTTTATCGGGGGGCTGGCGAGTACCTTAA back to topprotein sequence of rna5935 >rna5935-protein ID=rna5935-protein|Name=rna5935|organism=Nannochloropsis gaditana|type=polypeptide|length=150bp
MSSSLDEQRAARAMSHLSVSGRKWQAGHPHARHRPHSSACATATHPTAKT
RSKPKTHWVGWEVVAPKHHAKDLAPAMHPGVEERFWLCLHCDAQFYAVPG
QDDLPQATATSRVAREGSFEGHAGFHRLSLGVVQSVRGQSQKEGQGGRGM back to topmRNA from alignment at CM002467.1:140287..142921- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5935 ID=rna5935|Name=rna5935|organism=Nannochloropsis gaditana|type=mRNA|length=2635bp|location=Sequence derived from alignment at CM002467.1:140287..142921- (Nannochloropsis gaditana)
ACTTTGACATACCAACTTGAGAAGAAGCACACAGACATGTTTGTTGGCAC
GTTTTGGGTTGTGTAAGGTCCCAGCATCACAAGTGAAGTAGCGACGTGAG
GAACAAAGCGAGAGCTGCCTCCTGAATTCCCCTTTGACTTTCGACGGGTT
TGCGTCTGTCCATGGTACTTTTCAATATTATTGCGTTAAGCCAGGCTCTG
TAGACGACTTATTTTCATGTACCCTGGCGCATACGTCCACAGTTCCCACA
TATCAAAGTCAACATGGCATCGGCACCATCAAGCAGCGACTCAACGAAGC
CAGGTTTCCTGGATACTCTACCCCCGGTCGTGCGCGCGTTCGTCTTGGGG
GCTGTGGCGTTGCACGTGGTCGCCTTCGTAGTCTGGGGCGTATTGTTGAT
GAGGGAGCAGCGGCAGGGCAAAGTGAAGAGCAAAGAGTTTTGAGAGAGGG
GCTGTTGCACAAGGGAGTCGAAATGTTCGACTCGAGGCAGTATGGAAAGA
GCGTAAATGTGTAATCTTTAGCTGATGGAAAAGTTGAAATGCCAAGCAAG
ACGGAACGAGGCGGCGTAGGTGCAGACATGGGCGGGAAAACGAGCGTGTA
AAGAGTAGCACTAGCGTGGGGTGGAACAAGGAAAGGAGGGCCTAGCCTAA
CGGGAGATCGACCAGGCGTAGACATGATCAATACATTCGTCCGTAGAGAC
ACCGAGAGACCCGCGCGCCGACCTGGATTAAAGTCATTCGCATGCTTTTT
AAAGGTGGGCGTCGGATGAGGACACGCATAAGCCTCCACGCCTCGAGTTT
ATTGCTACTTTGTTAGTCCCTGTGCCCTCGACCTCGGTAATATCTCTGTT
TCGATACATATCTAGGCAGGAGACACGGTCAATGCCACGCAGAGAAGCAC
CGCACTTATTTTCAGTTCTGAAGTCGCCGAGTACCAAGCATGCTGTCTTA
GCCTTTCCCCTCTCAGAGTGACCCCCCTTCCAGTGTTCCCCCCAGCCAGG
TCCTCCACTCCTTTCATCTCCCCCCACCTTCCTCCTCACTCCACATCCAT
CATTTCCCGTCATTCATGCTTCCCTTTCCCCCCCTTCCCTGACCTCCTCC
CCGCCCGGACCGACAGGGGCCGCCGCTGCCACGCCCGGCCGACCCAAGCT
GCGGTCAAAGCCGCCAATCCGAGGCTCCTCAGCCTTCCTTTCCAACGCTG
ACACATCCCTGCCATGTCCTCCTCACTCGACGAGCAACGCGCCGCGCGTG
CCATGTCGCATTTGTCTGTCTCTGGACGCAAATGGCAGGCAGGGCACCCC
CACGCCCGCCATAGGCCCCATTCCTCCGCCTGCGCTACGGCCACGCACCC
CACGGCCAAAACCAGGAGCAAGCCAAAGACCCACTGGGTCGGGTGGGAGG
TAAGGAAGGAGGAAAGGGAGGGGAGGGAGGGAAGGCGGGGCGAACACCAG
GAGTGACCGCCTAACCAATCCCAGCTGGACATTGGCAGGTCGTGGCTCCA
AAGCACCATGCGAAAGACCTTGCCCCCGCCATGCACCCGGGCGTCGAGGA
AAGATTCTGGTTGTGCCTCCACTGCGATGCCCAATTCTATGCTGTCCCTG
GCCAAGACGACCTGCCACAGGCGACCGCCACAAGCAGGGTGGCCCGAGAG
GGCAGCTTTGAGGGCCACGCTGGCTTTCACAGGCTCTCCCTCGGCGTTGT
GCAGAGCGTGCGTGGCCAAAGCCAAAAGGAGGGACAGGGAGGGCGTGGAA
TGTAGTGGTGGGGAGCCTTCATGCCCCTCGGAAGGGAGATTGGTGCGGTA
GACGAGCGTCTTCCGTGAGGTCACTGGAAGAGGGGAAGGGCAGGGGGCAG
AGGGCGAGGGAGGACGCGGCGAGGATTGAAAAACGAGAGCCCGGAGCTGG
TGGTGTGTGTTTGCGAAGAGGAAGCAGCGGGCAGGCGGTGGACGGGAGCG
GTAGCGGATATTGGTTACGAAGTCATGTGGGCCGATGAGAACGTGCCAAG
GGCTTGATGTGTACGCATCCAACCACCGTTTTAAGGCCAACGCTGTCTGA
TCCTTATCATAAGGCTTTCCTTTGACGCTTGTCCACAGCTCGTTCAGTTG
GATGTGCATTTTTCTGAGCGTTGAAAGATGATGGGAAAACGCAGCGTAAG
GAGGAGGTTGTATGCCAGTGAGCTTATAGCAAGACCGTTGAAACCCACTT
TCTCACCGAAGTAGGACACCTGACACGCCACTGAGTGTTTCCCATGACGA
TGTTGGAGCTGGTGGCTTTCTTGTGGCCGGCATGGCCGCGCTTTCATCTG
CAAAGTCATGTATAGGACATGGCATGGGGTGGGATCAGAGCACTGACGTA
CACGTTCGTGAATTGCTTGCGGTAACGGCCTAGAAATGACGCTTTTGATA
AAGAAAGCAAAAGACAGGTTCTTTGAAAAGCAATGGCTGCGGTTTGTTGT
TATGGGTTTAACTCGATATGCCACCTCCTTCGTTTTTTATAATTTTGCTT
GCAAATGTTCTTGGATGGAGTCAAGCATTGGGTCGAGGTCAAGCCATTGG
GGGCCTCCACCGACAGTGAGATTACGGGAAGCTTTTACAACTCTCGCCGC
GTCCACAAAGGGAAATATTGCTTATCAGGAAGGAA back to topCoding sequence (CDS) from alignment at CM002467.1:140287..142921- >rna5935 ID=rna5935|Name=rna5935|organism=Nannochloropsis gaditana|type=CDS|length=906bp|location=Sequence derived from alignment at CM002467.1:140287..142921- (Nannochloropsis gaditana)
GTCGTGGCTCCAAAGCACCATGCGAAAGACCTTGCCCCCGCCATGCACCC
GGGCGTCGAGGAAAGATTCTGGTTGTGCCTCCACTGCGATGCCCAATTCT
ATGCTGTCCCTGGCCAAGACGACCTGCCACAGGCGACCGCCACAAGCAGG
GTGGCCCGAGAGGGCAGCTTTGAGGGCCACGCTGGCTTTCACAGGCTCTC
CCTCGGCGTTGTGCAGAGCGTGCGTGGCCAAAGCCAAAAGGAGGGACAGG
GAGGGCGTGGAATGTAGATGTCCTCCTCACTCGACGAGCAACGCGCCGCG
CGTGCCATGTCGCATTTGTCTGTCTCTGGACGCAAATGGCAGGCAGGGCA
CCCCCACGCCCGCCATAGGCCCCATTCCTCCGCCTGCGCTACGGCCACGC
ACCCCACGGCCAAAACCAGGAGCAAGCCAAAGACCCACTGGGTCGGGTGG
GAGGTCGTGGCTCCAAAGCACCATGCGAAAGACCTTGCCCCCGCCATGCA
CCCGGGCGTCGAGGAAAGATTCTGGTTGTGCCTCCACTGCGATGCCCAAT
TCTATGCTGTCCCTGGCCAAGACGACCTGCCACAGGCGACCGCCACAAGC
AGGGTGGCCCGAGAGGGCAGCTTTGAGGGCCACGCTGGCTTTCACAGGCT
CTCCCTCGGCGTTGTGCAGAGCGTGCGTGGCCAAAGCCAAAAGGAGGGAC
AGGGAGGGCGTGGAATGTAGATGTCCTCCTCACTCGACGAGCAACGCGCC
GCGCGTGCCATGTCGCATTTGTCTGTCTCTGGACGCAAATGGCAGGCAGG
GCACCCCCACGCCCGCCATAGGCCCCATTCCTCCGCCTGCGCTACGGCCA
CGCACCCCACGGCCAAAACCAGGAGCAAGCCAAAGACCCACTGGGTCGGG
TGGGAG back to top
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