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Properties
| Property Name | Value |
|---|
| Product | endonuclease exonuclease phosphatase |
| Orig transcript id | gnl|cribi|Naga_100292g5.1295.mrna |
| Orig protein id | gnl|cribi|Naga_100292g5.1295 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:122277..124782 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5929 ID=rna5929|Name=rna5929|organism=Nannochloropsis gaditana|type=mRNA|length=1464bp
ATGGCACCGGAGCTTCGGAATGCTTCCTCCGTCCCGCCCTCCCTCGATGC
TTCCCTGTTCGCGGCGGACGTCTATGCCTTAGGAGCCGTCCTCCGGGCGG
CGACGAAGCACCGGGCGAGGGCGGGAAAGAGGGCGGGAGGGAAGGAGGGC
TGGTCCGAAGGTTGGCGGGACGAGGTGTGCAGGCAAGTAGAGGCGCTGCT
GGGGAGGATGATGGATAGCGACCCCGCGCATCGCCCGTCGGCCAGGACCG
TCCTGCTGACCGCGATCGTGTTGCTGGCAGAGGGAGGGAGGGAGAGGGAG
GACGATGGGACGGAGGAGAGGATGGAGCCCCAGACAGAGGAGGAAGAGGC
CTCAAAAGGCGCGAACGAAAGGCCGTCGGTGAAGAGGACCGTTGCGAGGG
CAAGCCAGGGCAGCCCCAGCATGCCCCTCTGCCTTGGCCACGGGAGCGGA
AGGAGTGGCCGCAGGGGCGGCGGGGCTGAGGGCGACAACTTTACCGGAGA
AAAAGGGTCGCGTCGAACGCTGGTCGACAAGGAGAAGGTCCGTTTGACGA
GCACATGTAGCGGGAAGAGGGAGGGAATGGGGAAGGAGAGAGGGGGGAAA
TTGGAAAGGTCATCAGCAGGGAAAGAAGAGCCGCAGGTCGAAGAACGCGA
CGCGGCTTCTCCTTCCCATCAAAGCCTCGGGAAGGGAAAAGGAATCGCTC
ATTTGTCATGTCTTTGCACGTATGGTCACCTGCTACAGCCCTTGTCTGCT
TCTCCGAGAGATTACCCGGAGGGTGGAGGGACACTTGGGCAGGAAGGCGA
GCCCTCTTCTCGATGTCCGTCGTTGACATTTAGGCACTCGATTCCGAGGG
AAGAATTGCGAATGGGCCCGGACCAGAGGAAGAATAGAATGGGGAAAAGA
GCGTCAAACGACGGTCAAAGGAGGGGGGCGGAGGATATGATTGCTGGCTG
TAGCAATGGCTGGTTCGATGGTACGTCCCTCACCATCTCTGTTGCGCAGC
CGGAGTCGCGTCGCCCTTCCGTCAAAGCTGCTCGTAAGACGGTAGAGCGG
CCATGCTACCTGCGGACAGTAAAATGCCCGCCACACAGCGTGCACCGTTG
CTGCGGGCCGGAAGTCTCGTGCAAGTCAACGGGCTCTGTGTCCTTGTCTG
AAAAAGGATGCGGCAGCGAGATGCTCCTGGGGAGCAGAGGGCAGCACCAA
AATCTTCCATGTCATGGTGCGTCTCATCCATCGCAGGATTATTATCGGAC
GGAAGAGGATGCGGAAAGGGTTGGGAACACATTTGAGAACGAGAAAATGG
ATTGTTCGCCTGCTTGAGTGTGGAAAGCGGGCGCTCTCAATGATGTACAT
TGGTGAATCGTATGTGGTTACATATGAATGGATGGCGGATTTTATTTAAT
GACGTCTTTGATTTATGAGAAATGAGGGCCAAAATTGAAAGAAATTATCA
GAATTATGTTTCAA back to topprotein sequence of rna5929 >rna5929-protein ID=rna5929-protein|Name=rna5929|organism=Nannochloropsis gaditana|type=polypeptide|length=432bp
MNISILSLLGSLSTARLPMVNQRLCSCIPALLFATLLLFLSSAHAYRENY
TCHFAPSIPEDRRPSPYRLRIVQFNVEFFFLDQSEGGLVCPGPDCPWPDA
ETAHAHALRIANVLKELRPDIVNLCEVEGCDEINWLATRLNEEASERVQE
EAGPDTPTQAFGYNYFLLKGQDTFTGQNTALLTRIDPSTDLDRSTDRVPY
PLPGSQCGWETRRASAWAGGNFRQQFGDRTNGHIGGSADGQAGVSKHYFT
TFHLQEVGVKIAIVGIHLLARPIDPERCAEREAQATVLRGVVDGFIAEGY
EVVVLGDFNDFDGSVPDINNNLPTSRVMEILKGTDLFPTATFLPQAERYT
DWWDRNGNCQVDAPEELDMIDHVLLTKGLQERVIAVYVYHAYDEYCGTLD
SDHYPVVIDLEWEGVKKEWLDDLETEGSSKMA back to topmRNA from alignment at CM002467.1:122277..124782+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5929 ID=rna5929|Name=rna5929|organism=Nannochloropsis gaditana|type=mRNA|length=2506bp|location=Sequence derived from alignment at CM002467.1:122277..124782+ (Nannochloropsis gaditana)
ACGCCTTTATTCATTACACACCGATATAAATTGTACATTATAAACAGATG
AACATATCAATCTTGAGCTTGTTGGGCTCTTTGAGCACAGCGCGTCTGCC
GATGGTGAACCAGCGCTTGTGCTCGTGTATTCCCGCCCTTCTGtttgcca
ccctccttctctttttatCTTCTGCACATGCCTACCGCGAGAATTATACG
TGCCATTTCGCACCTTCCATCCCTGAAGATCGTCGTCCAAGTCCTTATCG
ACTTCGTATAGTCCAGTTCAACGTGgaatttttcttcctcgatcaAAGTG
AAGGAGGTTTAGTATGTCCGGGACCTGATTGTCCTTGGCCAGACGCGGAA
ACTGCGCATGCTCATGCACTTCGGATAGCCAACGTTTTGAAAGAATTGCG
ACCTGACATTGTAAATTTGTGCGAAGTGGAAGGATGTGACGAGATAAACT
GGTTGGCGACGAGGTTGAATGAAGAGGCCTCCGAGCGCGtgcaggaagaa
gcaggacCAGACACGCCGACTCAAGCCTTTGGCTACAATTATTTCCTGCT
GAAAGGCCAGGACACTTTTACGGTATGTGTGTGGGCAGTGTCTTCTCCCA
TTTAATACCGCGCAATGGTTTTGACGAACGCTGACTTCTCATCCTCTGCT
ATTTTCGTGGCACCAATTATCCCTCCAGGGTCAAAACACTGCCCTTCTCA
CCCGTATCGATCCCTCCACGGACCTTGATCGAAGCACCGACAGGGTTCCA
TACCCTCTGCCTGGATCCCAGTGTGGTTGGGAGACAAGGAGAGCCAGcgc
ctgggcggggggaaatTTCCGGCAGCAATTTGGAGACCGAACCAACGGGC
ACATTGGAGGGTCGGCCGATGGACAGGCGGGGGTTTCCAAGCATTATTTC
ACGACCTTCCACCTGCAAGAGGTGGGCGTGAAAATCGCCATAGTGGGGAT
CCATCTGTTGGCCCGGCCCATAGACCCAGAGCGATGCgcggagcgggagg
cccAAGCCACGGTGTTGCGGGGTGTGGTCGACGGCTTTATTGCCGAGGGT
TACGAGGTTGTCGTCCTCGGTGACTTTAATGGTAAGCACTCTGGTACAGG
GATGGCGGTGGGGGGACGCTCGCGGCGATGCCTGGTTCATCCATGGGAAG
CCCCCTGTCCCCCATCGGCtatctccgtccctccctctctccctcccttc
ctcgctccctctctccctccttccctccctctcttgtccTCTGTATTTTC
AGACTTTGATGGCTCGGTGCCGGACATCAACAACAACTTGCCCACGTCCC
GCGTGATGGAAATTCTGAAGGGAACGGATCTTTTTCCCACCGCCACTTTT
CTGCCTCAAGCAGAGCGTTACACCGATTGGTGGGACCGAAATGGAAATTG
TCAGGTGGACGCTCCGGAGGTACGTTTTCCATCAACCTCCCTTTTATTCC
CGCCCGTTGGTCGTCTTCCCGAActtgttttcctcccgtcctgtCTCTCG
GTCTTTCTTGGCGTCTCGTATAGACATGGCATGGAGAGTGCGTGCTGCAG
ACATCCCTTTTAGTTCCTTATAAGACGATTGAAATCATGACAAAAAATGC
CTTTCCTTACTCCCTCAGGAGCTGGATATGATCGACCACGTCCTGCTCAC
AAAAGGCCTGCAGGAGCGTGTCATTGCCGTGTACGTCTACCATGCGTATG
ACGAGTATTGTGGCACCTTAGATAGCGACCATTACCCGGTGGTGATTGAT
TtggagtgggaaggggtCAAGAAGGAGTGGTTGGACGACTTGGAAACGGA
AGGGTCAAGCAAAATGGCGTAAAATTATCTGTAGATGGTCAAGTTCTGTA
AAGGGTGCGATGAAACAGAAAGATGGAGACAAGTCCCCAAAAATCGATAG
GCACGTAGATTGTACATAGAAAGATGAGTACGCCTGTGAAGGTGAAAATG
GATGACGTCATGACTGAATGGCGGTGGATAGCTGGAGAAATCGACGTTCC
TTGGGGGACCGGAGCTTGTGTCAGTACGACTTGAGCAAAGTAAAGAGCAC
GAGCAAtcagaaagcggaggagcggaTGATCATCTTGATGCGAATGGCAA
GCGCTTGATCTTATTTTGCCGTGTAACCTTTGACacgaatataaggatga
catgatgatgacaATTAAGGAACAGGAGATCAGCGCTAGGAGGTTGGGGG
AATCGGGTAtcagcgataggaggttTAGAGAGTGTTGCAGCTATTTTCCT
TTATGAGTTCTAGGTCTGTACCACGTCGTGCTGATCGCTATTGagtcatg
tcatggttttgcgtccacctaatcattttCTATGTTATATCATAatacga
caacaggactggcgtcgaccagtgtctttggttgtctgtcctattggtta
tcttagtacgagattcttgggtgaatcattggtatacattctcagggaga
atagtggtcgtactgaagaattAATTGGGTATTGAGTTACCCGTGACGTT
ttggtt back to topCoding sequence (CDS) from alignment at CM002467.1:122277..124782+ >rna5929 ID=rna5929|Name=rna5929|organism=Nannochloropsis gaditana|type=CDS|length=5196bp|location=Sequence derived from alignment at CM002467.1:122277..124782+ (Nannochloropsis gaditana)
ATGAACATATCAATCTTGAGCTTGTTGGGCTCTTTGAGCACAGCGCGTCT
GCCGATGGTGAACCAGCGCTTGTGCTCGTGTATTCCCGCCCTTCTGtttg
ccaccctccttctctttttatCTTCTGCACATGCCTACCGCGAGAATTAT
ACGTGCCATTTCGCACCTTCCATCCCTGAAGATCGTCGTCCAAGTCCTTA
TCGACTTCGTATAGTCCAGTTCAACGTGgaatttttcttcctcgatcaAA
GTGAAGGAGGTTTAGTATGTCCGGGACCTGATTGTCCTTGGCCAGACGCG
GAAACTGCGCATGCTCATGCACTTCGGATAGCCAACGTTTTGAAAGAATT
GCGACCTGACATTGTAAATTTGTGCGAAGTGGAAGGATGTGACGAGATAA
ACTGGTTGGCGACGAGGTTGAATGAAGAGGCCTCCGAGCGCGtgcaggaa
gaagcaggacCAGACACGCCGACTCAAGCCTTTGGCTACAATTATTTCCT
GCTGAAAGGCCAGGACACTTTTACGGGTCAAAACACTGCCCTTCTCACCC
GTATCGATCCCTCCACGGACCTTGATCGAAGCACCGACAGGGTTCCATAC
CCTCTGCCTGGATCCCAGTGTGGTTGGGAGACAAGGAGAGCCAGcgcctg
ggcggggggaaatTTCCGGCAGCAATTTGGAGACCGAACCAACGGGCACA
TTGGAGGGTCGGCCGATGGACAGGCGGGGGTTTCCAAGCATTATTTCACG
ACCTTCCACCTGCAAGAGGTGGGCGTGAAAATCGCCATAGTGGGGATCCA
TCTGTTGGCCCGGCCCATAGACCCAGAGCGATGCgcggagcgggaggccc
AAGCCACGGTGTTGCGGGGTGTGGTCGACGGCTTTATTGCCGAGGGTTAC
GAGGTTGTCGTCCTCGGTGACTTTAATGACTTTGATGGCTCGGTGCCGGA
CATCAACAACAACTTGCCCACGTCCCGCGTGATGGAAATTCTGAAGGGAA
CGGATCTTTTTCCCACCGCCACTTTTCTGCCTCAAGCAGAGCGTTACACC
GATTGGTGGGACCGAAATGGAAATTGTCAGGTGGACGCTCCGGAGGAGCT
GGATATGATCGACCACGTCCTGCTCACAAAAGGCCTGCAGGAGCGTGTCA
TTGCCGTGTACGTCTACCATGCGTATGACGAGTATTGTGGCACCTTAGAT
AGCGACCATTACCCGGTGGTGATTGATTtggagtgggaaggggtCAAGAA
GGAGTGGTTGGACGACTTGGAAACGGAAGGGTCAAGCAAAATGGCGTAAA
TGAACATATCAATCTTGAGCTTGTTGGGCTCTTTGAGCACAGCGCGTCTG
CCGATGGTGAACCAGCGCTTGTGCTCGTGTATTCCCGCCCTTCTGtttgc
caccctccttctctttttatCTTCTGCACATGCCTACCGCGAGAATTATA
CGTGCCATTTCGCACCTTCCATCCCTGAAGATCGTCGTCCAAGTCCTTAT
CGACTTCGTATAGTCCAGTTCAACGTGgaatttttcttcctcgatcaAAG
TGAAGGAGGTTTAGTATGTCCGGGACCTGATTGTCCTTGGCCAGACGCGG
AAACTGCGCATGCTCATGCACTTCGGATAGCCAACGTTTTGAAAGAATTG
CGACCTGACATTGTAAATTTGTGCGAAGTGGAAGGATGTGACGAGATAAA
CTGGTTGGCGACGAGGTTGAATGAAGAGGCCTCCGAGCGCGtgcaggaag
aagcaggacCAGACACGCCGACTCAAGCCTTTGGCTACAATTATTTCCTG
CTGAAAGGCCAGGACACTTTTACGGGTCAAAACACTGCCCTTCTCACCCG
TATCGATCCCTCCACGGACCTTGATCGAAGCACCGACAGGGTTCCATACC
CTCTGCCTGGATCCCAGTGTGGTTGGGAGACAAGGAGAGCCAGcgcctgg
gcggggggaaatTTCCGGCAGCAATTTGGAGACCGAACCAACGGGCACAT
TGGAGGGTCGGCCGATGGACAGGCGGGGGTTTCCAAGCATTATTTCACGA
CCTTCCACCTGCAAGAGGTGGGCGTGAAAATCGCCATAGTGGGGATCCAT
CTGTTGGCCCGGCCCATAGACCCAGAGCGATGCgcggagcgggaggcccA
AGCCACGGTGTTGCGGGGTGTGGTCGACGGCTTTATTGCCGAGGGTTACG
AGGTTGTCGTCCTCGGTGACTTTAATGACTTTGATGGCTCGGTGCCGGAC
ATCAACAACAACTTGCCCACGTCCCGCGTGATGGAAATTCTGAAGGGAAC
GGATCTTTTTCCCACCGCCACTTTTCTGCCTCAAGCAGAGCGTTACACCG
ATTGGTGGGACCGAAATGGAAATTGTCAGGTGGACGCTCCGGAGGAGCTG
GATATGATCGACCACGTCCTGCTCACAAAAGGCCTGCAGGAGCGTGTCAT
TGCCGTGTACGTCTACCATGCGTATGACGAGTATTGTGGCACCTTAGATA
GCGACCATTACCCGGTGGTGATTGATTtggagtgggaaggggtCAAGAAG
GAGTGGTTGGACGACTTGGAAACGGAAGGGTCAAGCAAAATGGCGTAAAT
GAACATATCAATCTTGAGCTTGTTGGGCTCTTTGAGCACAGCGCGTCTGC
CGATGGTGAACCAGCGCTTGTGCTCGTGTATTCCCGCCCTTCTGtttgcc
accctccttctctttttatCTTCTGCACATGCCTACCGCGAGAATTATAC
GTGCCATTTCGCACCTTCCATCCCTGAAGATCGTCGTCCAAGTCCTTATC
GACTTCGTATAGTCCAGTTCAACGTGgaatttttcttcctcgatcaAAGT
GAAGGAGGTTTAGTATGTCCGGGACCTGATTGTCCTTGGCCAGACGCGGA
AACTGCGCATGCTCATGCACTTCGGATAGCCAACGTTTTGAAAGAATTGC
GACCTGACATTGTAAATTTGTGCGAAGTGGAAGGATGTGACGAGATAAAC
TGGTTGGCGACGAGGTTGAATGAAGAGGCCTCCGAGCGCGtgcaggaaga
agcaggacCAGACACGCCGACTCAAGCCTTTGGCTACAATTATTTCCTGC
TGAAAGGCCAGGACACTTTTACGGGTCAAAACACTGCCCTTCTCACCCGT
ATCGATCCCTCCACGGACCTTGATCGAAGCACCGACAGGGTTCCATACCC
TCTGCCTGGATCCCAGTGTGGTTGGGAGACAAGGAGAGCCAGcgcctggg
cggggggaaatTTCCGGCAGCAATTTGGAGACCGAACCAACGGGCACATT
GGAGGGTCGGCCGATGGACAGGCGGGGGTTTCCAAGCATTATTTCACGAC
CTTCCACCTGCAAGAGGTGGGCGTGAAAATCGCCATAGTGGGGATCCATC
TGTTGGCCCGGCCCATAGACCCAGAGCGATGCgcggagcgggaggcccAA
GCCACGGTGTTGCGGGGTGTGGTCGACGGCTTTATTGCCGAGGGTTACGA
GGTTGTCGTCCTCGGTGACTTTAATGACTTTGATGGCTCGGTGCCGGACA
TCAACAACAACTTGCCCACGTCCCGCGTGATGGAAATTCTGAAGGGAACG
GATCTTTTTCCCACCGCCACTTTTCTGCCTCAAGCAGAGCGTTACACCGA
TTGGTGGGACCGAAATGGAAATTGTCAGGTGGACGCTCCGGAGGAGCTGG
ATATGATCGACCACGTCCTGCTCACAAAAGGCCTGCAGGAGCGTGTCATT
GCCGTGTACGTCTACCATGCGTATGACGAGTATTGTGGCACCTTAGATAG
CGACCATTACCCGGTGGTGATTGATTtggagtgggaaggggtCAAGAAGG
AGTGGTTGGACGACTTGGAAACGGAAGGGTCAAGCAAAATGGCGTAAATG
AACATATCAATCTTGAGCTTGTTGGGCTCTTTGAGCACAGCGCGTCTGCC
GATGGTGAACCAGCGCTTGTGCTCGTGTATTCCCGCCCTTCTGtttgcca
ccctccttctctttttatCTTCTGCACATGCCTACCGCGAGAATTATACG
TGCCATTTCGCACCTTCCATCCCTGAAGATCGTCGTCCAAGTCCTTATCG
ACTTCGTATAGTCCAGTTCAACGTGgaatttttcttcctcgatcaAAGTG
AAGGAGGTTTAGTATGTCCGGGACCTGATTGTCCTTGGCCAGACGCGGAA
ACTGCGCATGCTCATGCACTTCGGATAGCCAACGTTTTGAAAGAATTGCG
ACCTGACATTGTAAATTTGTGCGAAGTGGAAGGATGTGACGAGATAAACT
GGTTGGCGACGAGGTTGAATGAAGAGGCCTCCGAGCGCGtgcaggaagaa
gcaggacCAGACACGCCGACTCAAGCCTTTGGCTACAATTATTTCCTGCT
GAAAGGCCAGGACACTTTTACGGGTCAAAACACTGCCCTTCTCACCCGTA
TCGATCCCTCCACGGACCTTGATCGAAGCACCGACAGGGTTCCATACCCT
CTGCCTGGATCCCAGTGTGGTTGGGAGACAAGGAGAGCCAGcgcctgggc
ggggggaaatTTCCGGCAGCAATTTGGAGACCGAACCAACGGGCACATTG
GAGGGTCGGCCGATGGACAGGCGGGGGTTTCCAAGCATTATTTCACGACC
TTCCACCTGCAAGAGGTGGGCGTGAAAATCGCCATAGTGGGGATCCATCT
GTTGGCCCGGCCCATAGACCCAGAGCGATGCgcggagcgggaggcccAAG
CCACGGTGTTGCGGGGTGTGGTCGACGGCTTTATTGCCGAGGGTTACGAG
GTTGTCGTCCTCGGTGACTTTAATGACTTTGATGGCTCGGTGCCGGACAT
CAACAACAACTTGCCCACGTCCCGCGTGATGGAAATTCTGAAGGGAACGG
ATCTTTTTCCCACCGCCACTTTTCTGCCTCAAGCAGAGCGTTACACCGAT
TGGTGGGACCGAAATGGAAATTGTCAGGTGGACGCTCCGGAGGAGCTGGA
TATGATCGACCACGTCCTGCTCACAAAAGGCCTGCAGGAGCGTGTCATTG
CCGTGTACGTCTACCATGCGTATGACGAGTATTGTGGCACCTTAGATAGC
GACCATTACCCGGTGGTGATTGATTtggagtgggaaggggtCAAGAAGGA
GTGGTTGGACGACTTGGAAACGGAAGGGTCAAGCAAAATGGCGTAA back to top
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