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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100292g6.1292.mrna |
| Orig protein id | gnl|cribi|Naga_100292g6.1292 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:120538..122001 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5928 ID=rna5928|Name=rna5928|organism=Nannochloropsis gaditana|type=mRNA|length=856bp
TCGGCCGGAATTCTTCCTGGTGTAATTTTTCTCCTCCAGCTTCTCCACGC
TGTGTCTAACACCCGCATCATATTCCATCCACCGGCGTTATGGCCTGGAA
ACGTTTTCGTCGTGAGAAAGACTGGGATGATCAGACTTGACCTTCTTTGT
ACTCATCCATTTCACCGTGGGCACCGCATCCACCCCCTCAACAGCAAGCA
GCAGAAAAGCAAGAAAGATGGGAGACTACGACGCGTATGGTGTCCCGGCC
CCCGTTGCTGAAGCCCCTCCCCGCCCAACATCTCCAGGGCAAAGCGAAGA
GGGTTACAAACTCTTCGTTGGCAACCTTTCTTTCCGGACGGAATCCGCCG
CCTTGCGCGAAGCTTTTGAACCTTTCGGACGGATTGTCTTCTCGACCGTG
ATTGAAAACCGGGAAACGGGCCAGAGCCGTGGCTTTGGCTTCGTCGTTTA
CGAACAAAAACACGAGGCGGATGCCGCTATTTCCCGCATGGACAACGCCG
AGCTGGATGGACGCACCCTTCGGGTCAATTTCGCGCGGCCTCGGGAAGAA
TTCGGGGGCAGGCGCGGCGGGGGACGGGGTGGTTACGAGGGGAGAGACCA
TAATGCAAGCTGCAGCCGCACTATTAACAAGGATATACGAAAAGAATGGA
AATTGAGAAAAAGATGGAAAGACAAATGCCAGCATACGACAACAAAGCAC
CACCGCGACACGACGGCCGAAGGGGGGCAGGAGGGAGGGAGGGAGGAAGG
GCGGAGGGGGGTGGGCCGGAAGGAAAGAATGATGGAGGGCGAAGGGGAGA
GCAGGGTCGAGATGCGAATGACGATGCGGATAAGCTTTAGCAGTGGAGAG
AAGTGA back to topprotein sequence of rna5928 >rna5928-protein ID=rna5928-protein|Name=rna5928|organism=Nannochloropsis gaditana|type=polypeptide|length=438bp
MAPELRNASSVPPSLDASLFAADVYALGAVLRAATKHRARAGKRAGGKEG
WSEGWRDEVCRQVEALLGRMMDSDPAHRPSARTVLLTAIVLLAEGGRERE
DDGTEERMEPQTEEEEASKGANERPSVKRTVARASQGSPSMPLCLGHGSG
RSGRRGGGAEGDNFTGEKGSRRTLVDKEKVRLTSTCSGKREGMGKERGGK
LERSSAGKEEPQVEERDAASPSHQSLGKGKGIAHLSCLCTYGHLLQPLSA
SPRDYPEGGGTLGQEGEPSSRCPSLTFRHSIPREELRMGPDQRKNRMGKR
ASNDGQRRGAEDMIAGCSNGWFDGTSLTISVAQPESRRPSVKAARKTVER
PCYLRTVKCPPHSVHRCCGPEVSCKSTGSVSLSEKGCGSEMLLGSRGQHQ
NLPCHGASHPSQDYYRTEEDAERVGNTFENEKMDCSPA back to topmRNA from alignment at CM002467.1:120538..122001+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5928 ID=rna5928|Name=rna5928|organism=Nannochloropsis gaditana|type=mRNA|length=1464bp|location=Sequence derived from alignment at CM002467.1:120538..122001+ (Nannochloropsis gaditana)
ATGGCACCGGAGCTTCGGaatgcttcctccgtcccgccctccctcgatgc
TTCCCTGTTCGCGGCGGACGTCTATGCCTTAGGAGCCGTCCTCCGGGCGG
CGACGAAGCaccgggcgagggcgggaaagagggcgggagggaaggagggc
tggtCCGAAGGTTGGCGGGACGAGGTGTGCAGGCAAGTAGAGGCGCTGCt
ggggaggatgatggatAGCGACCCCGCGCATCGCCCGTCGGCCAGGACCG
TCCTGCTGACCGCGATCGTGTTGctggcagagggagggagggagagggag
gacgatgggacggaggagaggatggagccccagacagaggaggaagaggc
ctcAAAAGGCGCGAACGAAAGGCCGTCGGTGAAGAGGACCGTTGCGAGGG
CAAGCCAGGGCAGCCCCAGCATGCCCctctgccttggccacgggagcgga
aggagtggccgcaggggcggcggggctgAGGGCGACAACTTTACCGGAGA
AAAAGGGTCGCGTCGAACGCTggtcgacaaggagaaggtccGTTTGACGA
GCACATGtagcgggaagagggagggaatggggaaggagagaggggggaaa
ttggAAAGGTCATcagcagggaaagaagagccgCAGGTCGAAGAACGCGA
CgcggcttctccttcccatcaaAGCctcgggaagggaaaaggaatcGCTC
ATTTGTCATGTCTTTGCACGTATGGTCACCTGCTACAGCCCTTGTCTGCT
TCTCCGAGAGATTAcccggagggtggagggacacttgggcaggaaggcga
gcCCTCTTCTCGATGTCCGTCGTTGACATTTAGGCACTCGATTCCGAGGG
AAGAATTGCGAATGGGCCCGGACCAGAGGAAGAATAGAATGGGGAAAAGA
GCGTCAAACGACGgtcaaaggaggggggcggaggataTGATTGCTGGCTG
TAGCAATGGCTGGTTCGATGGTACGTCCCTCACCATCTCTGTTGCGCAGC
CGGAGTCGCGTCGCCCTTCCGTCAAAGCTGCTCGTAAGACGGTAGAGCGG
CCATGCTACCTGCGGACAGTAAAATGCCCGCCACACAGCGTGCACCGTTG
CTGCGGGCCGGAAGTCTCGTGCAAGTCAACGGGCTCTGTGTCCTTGTCTG
AAAAAGGATGCGGCAGCGAGATGCTCCTGGGGAGCAGAGGGCAGCACCAA
AATCTTCCATGTCATGGTGCGTCTCATCCATCGCAGGATTATTATCggac
ggaagaggatgcggaaAGGGTTGGGAACACATTTGAGAACGAGAAAATGG
ATTGTTCGCCTGCTTGAGTGTGGAAAGCGGGCGCTCTCAATGATGTACAT
TGGTGAATCGTATGTGGTTACATATGAATGGATGGCGGATTTTATTTAAT
GACGTCTTTGATTTATGAGAAATGAGGGCCAAAATTGAAAGAAATTATCA
GAATTATGTTTCAA back to topCoding sequence (CDS) from alignment at CM002467.1:120538..122001+ >rna5928 ID=rna5928|Name=rna5928|organism=Nannochloropsis gaditana|type=CDS|length=1317bp|location=Sequence derived from alignment at CM002467.1:120538..122001+ (Nannochloropsis gaditana)
ATGGCACCGGAGCTTCGGaatgcttcctccgtcccgccctccctcgatgc
TTCCCTGTTCGCGGCGGACGTCTATGCCTTAGGAGCCGTCCTCCGGGCGG
CGACGAAGCaccgggcgagggcgggaaagagggcgggagggaaggagggc
tggtCCGAAGGTTGGCGGGACGAGGTGTGCAGGCAAGTAGAGGCGCTGCt
ggggaggatgatggatAGCGACCCCGCGCATCGCCCGTCGGCCAGGACCG
TCCTGCTGACCGCGATCGTGTTGctggcagagggagggagggagagggag
gacgatgggacggaggagaggatggagccccagacagaggaggaagaggc
ctcAAAAGGCGCGAACGAAAGGCCGTCGGTGAAGAGGACCGTTGCGAGGG
CAAGCCAGGGCAGCCCCAGCATGCCCctctgccttggccacgggagcgga
aggagtggccgcaggggcggcggggctgAGGGCGACAACTTTACCGGAGA
AAAAGGGTCGCGTCGAACGCTggtcgacaaggagaaggtccGTTTGACGA
GCACATGtagcgggaagagggagggaatggggaaggagagaggggggaaa
ttggAAAGGTCATcagcagggaaagaagagccgCAGGTCGAAGAACGCGA
CgcggcttctccttcccatcaaAGCctcgggaagggaaaaggaatcGCTC
ATTTGTCATGTCTTTGCACGTATGGTCACCTGCTACAGCCCTTGTCTGCT
TCTCCGAGAGATTAcccggagggtggagggacacttgggcaggaaggcga
gcCCTCTTCTCGATGTCCGTCGTTGACATTTAGGCACTCGATTCCGAGGG
AAGAATTGCGAATGGGCCCGGACCAGAGGAAGAATAGAATGGGGAAAAGA
GCGTCAAACGACGgtcaaaggaggggggcggaggataTGATTGCTGGCTG
TAGCAATGGCTGGTTCGATGGTACGTCCCTCACCATCTCTGTTGCGCAGC
CGGAGTCGCGTCGCCCTTCCGTCAAAGCTGCTCGTAAGACGGTAGAGCGG
CCATGCTACCTGCGGACAGTAAAATGCCCGCCACACAGCGTGCACCGTTG
CTGCGGGCCGGAAGTCTCGTGCAAGTCAACGGGCTCTGTGTCCTTGTCTG
AAAAAGGATGCGGCAGCGAGATGCTCCTGGGGAGCAGAGGGCAGCACCAA
AATCTTCCATGTCATGGTGCGTCTCATCCATCGCAGGATTATTATCggac
ggaagaggatgcggaaAGGGTTGGGAACACATTTGAGAACGAGAAAATGG
ATTGTTCGCCTGCTTGA back to top
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