rna592, rna592 (mRNA) Nannochloropsis gaditana

Overview
Namerna592
Unique Namerna592
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length363
Alignment locationCM002455.1:1479116..1480514 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101255g3.8345.mrna
Orig protein idgnl|cribi|Naga_101255g3.8345
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1479116..1480514 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101255g3gene570Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna592rna592-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30082.1cds592Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna592 ID=rna592|Name=rna592|organism=Nannochloropsis gaditana|type=mRNA|length=363bp
ATGGGAGAGGGGAAGGAGGAGAAAAAGCGTCAAAAAGCAAGACAAACTGA
GGACTTGCGTATCATCCCTCTGTCCCTCCCTGGGCGTCTCCTGCGTCACG
AGGAAGGGGGAAAAGAGGGGAGAGAGGGAAAAGTGGGAGAAGGAGGAAAG
GAGTGCGTCGCTTTGGGAAGCGGGAGCTTGCGAATAAGAAGAATCTTGGT
AGAAGGACTTGGAGGGGGGATGGAAAGTCGTATGGGGCGGAGAAGACGAG
GGGGAAAACGTTGGAGGGAGGGGCGAGAGGGTATGGTAAGCATGTCCATA
TTGGAAAGAAGGAGCACGTTGCCATCGCGAGGGGATGGAGCGTGGAGACG
GTTGCCTCCATGA
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protein sequence of rna592

>rna592-protein ID=rna592-protein|Name=rna592|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp
LFLPPLPAPPGNQRRGRGFARGEVPRACPPQGYARGRERPGDEEEGGGSG
RGGNVGRAKGGGTGATQGFGARAEEREHHPAGSASLLLFFPPALSPMQAS
EALESEDSEIESDLYSSEEESPHMSLVQSWLAMIRGDEDDDEDFGEEEEE
EEEEEEDEEDEEEDEEEEEEEEEGGEDDDHEGEEEDFEGEEEEEEEEAGE
GEEGEEDGSGGVEVMSESEGGDD
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mRNA from alignment at CM002455.1:1479116..1480514-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna592 ID=rna592|Name=rna592|organism=Nannochloropsis gaditana|type=mRNA|length=1399bp|location=Sequence derived from alignment at CM002455.1:1479116..1480514- (Nannochloropsis gaditana)
CTCTTCCTCCCTCCACTCCCCGCCCCTCCAGGCAATCAACGCCGTGGTCG
GGGGTTTGCGCGGGGGGAGGTACCACGGGCATGCCCTCCACAAGGATATG
CACGCGGACGTGAGCGCCCTGGCGATGAGGAGGAGGGAGGAGGAAGCGGC
AGAGGAGGTAACGTGGGGCGGGCGAAGGGCGGGGGAACAGGAGCGACACA
GGGTTTTGGAGCACGCGCGGAAGAGAGAGAGCATCATCCGGCGGGTTCGG
CCTCACTCCTGCTTTTTTTCCCACCCGCCTTGTCTCCCATGCAGGCGAGC
GAAGCCCTTGAAAGCGAGGATAGTGAGATAGAGAGCGACTTATACTCGAG
CGAGGAGGAGTCGCCACATATGAGCCTGGTGCAGTCTTGGGTGAGTGGGG
TTGGAGCCCGATCGCTTGTTTTGTCTTGTTTTCCCTCTCTTCTTCTCACG
TTCTTGCCCCTTTCTCTCGGATTCGCTCCATGTGCACAGCTTGCGATGAT
CAGAGGTGACGAGGACGATGACGAGGACTTTGGGGAGGAGGAGGAGGAAG
AGGAAGAAGAGGAGGAGGACGAGGAGGATGAGGAGGAGGACGAGGAGGAG
GAGGAGGAGGAAGAGGAGGGAGGTGAAGATGATGATCACGAAGGAGAGGA
AGAAGATTTTGAGGGAGAAGAGGAGGAGGAGGAGGAGGAGGCAGGGGAGG
GGGAGGAAGGGGAGGAGGACGGGAGCGGTGGCGTGGAAGTGATGTCAGAG
AGCGAGGGAGGAGACGACTAGGGAGCCGGAACTTACGAGAAAGAGAAGAG
ACCAGAACGCAGCACCGAACAAAGCAGCGCATGGTGGAAAGCAAAGGGAT
GAGGTAAGTGCCTGGGAGGAAGGCAAGAGTGAGACGGGGCGAGGCGATGG
GAAGAAGCGGGTCCTGATGAGGGAAGGGGAGGGAGGAGGAAACGCAGGCA
GGGGGTGTACGAAATGAGCGCCAAGATGATAGAAGGCGAGAGGCTGGCGT
GTCAAGATCGACAACGTGGAGCCGGCGGGAGGGCTTTGGGGAAGAAGAGA
GCTGAAGCAAAGGCTTGAGAGGGGGAGGAGATGCGGCAGAACTATCAGAA
AGGGAGAGGAAGAATGAAAGGTACTGCTCATGGAGGCAACCTTAAGAAAG
AAATAAATTAGGACCGAAAAATCGAGCAGGGGAGAAAAGTAGAGAAATGT
GACGTGACTCGCAAAAAGTAGCGCCAGCGCTACGCTGAATGGAGAAAGTG
TGCGTCGCCTCAGGACGACAAGAAGTCCCGTGTCGTCCCCCTCCGTTCTC
CTTCTCCCCAAGACTTTGACACTTGCCAAGGATCCCTCGCTCCCATGGCT
TCGGCGGGCGAGGAAAACGAAAGCATACAGTTTGAAGTAAAGAGCCCTT
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Coding sequence (CDS) from alignment at CM002455.1:1479116..1480514-

>rna592 ID=rna592|Name=rna592|organism=Nannochloropsis gaditana|type=CDS|length=1344bp|location=Sequence derived from alignment at CM002455.1:1479116..1480514- (Nannochloropsis gaditana)
CTTGCGATGATCAGAGGTGACGAGGACGATGACGAGGACTTTGGGGAGGA
GGAGGAGGAAGAGGAAGAAGAGGAGGAGGACGAGGAGGATGAGGAGGAGG
ACGAGGAGGAGGAGGAGGAGGAAGAGGAGGGAGGTGAAGATGATGATCAC
GAAGGAGAGGAAGAAGATTTTGAGGGAGAAGAGGAGGAGGAGGAGGAGGA
GGCAGGGGAGGGGGAGGAAGGGGAGGAGGACGGGAGCGGTGGCGTGGAAG
TGATGTCAGAGAGCGAGGGAGGAGACGACTAGCTCTTCCTCCCTCCACTC
CCCGCCCCTCCAGGCAATCAACGCCGTGGTCGGGGGTTTGCGCGGGGGGA
GGTACCACGGGCATGCCCTCCACAAGGATATGCACGCGGACGTGAGCGCC
CTGGCGATGAGGAGGAGGGAGGAGGAAGCGGCAGAGGAGGTAACGTGGGG
CGGGCGAAGGGCGGGGGAACAGGAGCGACACAGGGTTTTGGAGCACGCGC
GGAAGAGAGAGAGCATCATCCGGCGGGTTCGGCCTCACTCCTGCTTTTTT
TCCCACCCGCCTTGTCTCCCATGCAGGCGAGCGAAGCCCTTGAAAGCGAG
GATAGTGAGATAGAGAGCGACTTATACTCGAGCGAGGAGGAGTCGCCACA
TATGAGCCTGGTGCAGTCTTGGCTTGCGATGATCAGAGGTGACGAGGACG
ATGACGAGGACTTTGGGGAGGAGGAGGAGGAAGAGGAAGAAGAGGAGGAG
GACGAGGAGGATGAGGAGGAGGACGAGGAGGAGGAGGAGGAGGAAGAGGA
GGGAGGTGAAGATGATGATCACGAAGGAGAGGAAGAAGATTTTGAGGGAG
AAGAGGAGGAGGAGGAGGAGGAGGCAGGGGAGGGGGAGGAAGGGGAGGAG
GACGGGAGCGGTGGCGTGGAAGTGATGTCAGAGAGCGAGGGAGGAGACGA
CTAGCTCTTCCTCCCTCCACTCCCCGCCCCTCCAGGCAATCAACGCCGTG
GTCGGGGGTTTGCGCGGGGGGAGGTACCACGGGCATGCCCTCCACAAGGA
TATGCACGCGGACGTGAGCGCCCTGGCGATGAGGAGGAGGGAGGAGGAAG
CGGCAGAGGAGGTAACGTGGGGCGGGCGAAGGGCGGGGGAACAGGAGCGA
CACAGGGTTTTGGAGCACGCGCGGAAGAGAGAGAGCATCATCCGGCGGGT
TCGGCCTCACTCCTGCTTTTTTTCCCACCCGCCTTGTCTCCCATGCAGGC
GAGCGAAGCCCTTGAAAGCGAGGATAGTGAGATAGAGAGCGACTTATACT
CGAGCGAGGAGGAGTCGCCACATATGAGCCTGGTGCAGTCTTGG
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Synonyms
Publications