rna5919, rna5919 (mRNA) Nannochloropsis gaditana

Overview
Namerna5919
Unique Namerna5919
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length963
Alignment locationCM002467.1:94531..95822 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100255g6.4990.mrna
Orig protein idgnl|cribi|Naga_100255g6.4990
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:94531..95822 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100255g6gene5714Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24771.1cds5904Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna5919rna5919-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna5919 ID=rna5919|Name=rna5919|organism=Nannochloropsis gaditana|type=mRNA|length=963bp
ATGGATACGCCAGGCCGACGGATTCCTGGCCAGGGGCGAAAGCGGTGTTC
CCCGCCTGTGCCTTCCGCTCCTTATTTTGATGCTGCTTTTGAGCCAGGTC
TTACAAAGACGACGAGCACTCCCGATTCAAGTTTCTCCTGCCATCATTCA
GGGCCACGACAGAGGAAAGGTCCTCTGCGGGTAGAAAGCTTGGAGATGGC
GGTGGCGCGGAGAGAGGATGACGAGGAGGGCGCTCGATTGAGGAGAGCCT
GCGAACAGCTAGAAAGAGATAGGGAGGAGGGAGAGAGGGAGGTGTGGAAT
TTGCGGAGCAGGTTGAGAAGTCTCGAGGACGCTCACGCCTTTCGGGAAGC
ATCTTTGCGTGTCCAGCAGCGCGAGGAAATGGCACTATTGAAAGACGAGG
GAGTCAGGCGGGAAGAAGAATGGAAAGCTGCGATGTTCAAGGCGCAGCAA
GAGACTCGAGCGGCGCGGGAGCTGCTGGGACGGGTCTTGGAGGATATCGT
GAATCTCGCTTATTCAGAGGCCCAGTACGACGGGGGTATCGGCGCCTGCT
CTCCTGCTTCCCCCTCGACCTCACCCATCTGCCTCCTGAACGATGCCGAG
TGGAGAAAAGAATCGTTGCAGTCCATCATGCGTCTGGAAAGAGAGGCGAA
GGCGTACCTTCGGAACAATCCTTTAGCAATGGCTGCGCCATCATGGGAAG
AAGGCATTCGCGAGGGCGAATTGATGGAGGAGCCGTCTGAAGAGGAGATG
CAGGAAGGAGAACAAGACGTGGATGAGGTCCTGCTCAGTGAAGGGGAGAA
AATGGCAGGGGCTTTGGCATCCGAGAACAGGGAATGGGGAAGAGACAAGG
TGAGTGAAGAGGACGAAACGAGGGAGGAGGGAGAGATGGAGGAAAGGGAG
ATGATGATGGCATGGAGTAAGGAAGGTAAAGAGGTGACTGTGGAGGATGA
GGCATTTAGGTAG
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protein sequence of rna5919

>rna5919-protein ID=rna5919-protein|Name=rna5919|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
MKVLPPSLSFHFSPVCFIDQIGFGYAILIARISKWSHKPTPSSQQKGNDT
RRRQKKDSPYTPCQCAALTFLKFHLFQSSRSTGFFLVQYRDWKPRILRRG
TRQNHRGDRCDRWRLSLSRSECGSSSHSAHIRRRGRRNTSAHRANRCRKH
R
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mRNA from alignment at CM002467.1:94531..95822-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna5919 ID=rna5919|Name=rna5919|organism=Nannochloropsis gaditana|type=mRNA|length=1292bp|location=Sequence derived from alignment at CM002467.1:94531..95822- (Nannochloropsis gaditana)
CCATGTCTTTCTCAATAAAAATTTGTAAATGTCTGTTAGGCACAAGCGGG
GCGAGTTTTTTCCAGGGCCTATCAATGCGGACGTTGTAATGGCAATGAAT
GCTGGGTGCGGCGATGGAGACGTAAGCCACAAGTAGACCGTTACCGCCTC
TTGATCACTTGCGAGGCGTGCGGAGAGCATTGGGATGAATGAAAGTCCTC
CCTCCCTCTCTCTCCTTTCATTTCTCTCCCGTATGCTTTATCGACCAAAT
TGGGTTCGGATACGCTATCCTCATTGCAAGAATTTCAAAGTGGAGTCACA
AACCGACGCCGTCTTCGCAGCAGAAAGGCAATGACACCCGCCGCCGTCAA
AAAAAGGACAGCCCCTATACCCCCTGCCAATGCGCGGCGTTGACGTTTCT
GAAGTTCCATTTGTTTCAATCTAGCCGCTCTACGGGCTTCTTCCTCGTCC
AATATAGAGATTGGAAGCCCCGGATTTTGCGTAGGGGAACCCGTCAGAAC
CACAGGGGGGATCGGTGCGATCGATGGCGTCTCAGTCTCTCTAGGTCTGA
ATGTGGGTCCAGTAGTCATTCCGCTCATATTCGTCGAAGGGGCCGCCGAA
ACACCTCGGCCCACCGTGCCAACCGATGTCGGAAACACCGTTGATGATAT
TGAAGGAGTACGCGTCGTCGAAAACATATCGGAAGGCAATGCAGTAGGAA
CCTTGGTGGGAGATGGCGTGGGAGCCGGCGTGGGAGCAGGCGTAGGCGAG
GCCGTCGGGGAGACCGTCGGGCTTGCGGTAGGCGCGCGGGTGGGGGAGGC
TGTGGGCGAGGCCGTAGGCGCTTCGGTGGGAGATGGCGTGGGAGCCGGCG
TGGGAGCAGGCGTAGGCGAGGCCGTCGGGGAGACCGTCGGGCTTGCGGTA
GGCGCGCGGGTGGGGGAGGCTGTGGGCGAGGCCGTAGGCGGCAATGTTAC
ACAAACTCCTCCATTGTAGGCATAGGAGTGAGTTCCAGTAGCGGAAGGGT
CTTCGTCCATTGTGACAACCTCGTCGCAGCTGATCCCGCACCAGCAACTG
CTTTTGTAGATAGGTAGTGCAGTCTCTGGATCGTAGAAATCAAAGAATTT
ATTATCGATTTCCAAGTTGTAGCACTCGTCTCTGCAGGCGGTTGCGTTAG
GCTGAAAGGATATGGTGAGGCTTTTTTAAGATACGGCATTTTAACGAAAA
GAAAAGGAATACAAAACTCAGAATAAATTTCCTGTACTACTATTTTGGAA
TTAAAAGTGCGAGATATTGTACTCACCCGCAATCCTGCGTTT
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Coding sequence (CDS) from alignment at CM002467.1:94531..95822-

>rna5919 ID=rna5919|Name=rna5919|organism=Nannochloropsis gaditana|type=CDS|length=456bp|location=Sequence derived from alignment at CM002467.1:94531..95822- (Nannochloropsis gaditana)
ATGAAAGTCCTCCCTCCCTCTCTCTCCTTTCATTTCTCTCCCGTATGCTT
TATCGACCAAATTGGGTTCGGATACGCTATCCTCATTGCAAGAATTTCAA
AGTGGAGTCACAAACCGACGCCGTCTTCGCAGCAGAAAGGCAATGACACC
CGCCGCCGTCAAAAAAAGGACAGCCCCTATACCCCCTGCCAATGCGCGGC
GTTGACGTTTCTGAAGTTCCATTTGTTTCAATCTAGCCGCTCTACGGGCT
TCTTCCTCGTCCAATATAGAGATTGGAAGCCCCGGATTTTGCGTAGGGGA
ACCCGTCAGAACCACAGGGGGGATCGGTGCGATCGATGGCGTCTCAGTCT
CTCTAGGTCTGAATGTGGGTCCAGTAGTCATTCCGCTCATATTCGTCGAA
GGGGCCGCCGAAACACCTCGGCCCACCGTGCCAACCGATGTCGGAAACAC
CGTTGA
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Synonyms
Publications