|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100446g5.5996.mrna |
| Orig protein id | gnl|cribi|Naga_100446g5.5996 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:64092..64806 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5912 ID=rna5912|Name=rna5912|organism=Nannochloropsis gaditana|type=mRNA|length=1028bp
TATACAGAACAAAACAGGGAGAGGTATCTCTGAACGCATGGAGTGTGCGG
ATGGTGTTTGTAAATTCGTCCCTCGAAGCCAGCGCGGTGTGCAGATAGGA
GGGAATGAGGAAAACGTGGAGCCTGCCCTGCCTCTCGTTTCGGTCGGTGA
CAAGCCTCCGATGCCACTGATATTCGAGACCCTCGAAGAGGGGGGGAGGA
GCTTCAGTCTGCAACGTCTGTGCGCGGCAGGGGAGGATGGAGGTCGAGTG
GTGGTGCTGGATTTATGGTCGAATGCCTGCGTCAGATGCCCCGAGGCTTT
GGACAAATTGAATCAAATGTCTAGCGCCTGTCAGGAAGACGTGAAAAAGC
ACCGTGTTACATTTGCGGCTGTGAACATTGATGACAAGGTAAAGGCCCGC
GCCCTGGTCGCGGAGAGGCAGTGGGACTGTTTGGCCCATTTTTACATCGA
TGCCGGGACCAAGGACACGCTCAAGGCGCGCTTCGGTCTGCAAAGCGTGC
CCTTTGTCATGGTCTTCGACCAGGTAGGGGGGGGGGCTGGCGGCGGAGGA
AGAAGCAGGGGTCGAGAAACCGCAGACATGTGGAGCAGGACCCTTAGGGA
CCGTCGCATCGGTATTCGTGGGCAGGAGCGCTTCTTAAACCCTGAATTCA
AAAGTTCTTGGAACGTGGATAAACTCTCAGACCTTCCACAGCCCGCACGG
CGGTCGCATGACGGGGGGCTGCAGCGGCTTCCCACTCATGAAGCGGGCGT
TGCCGTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCTCTCAGGAC
GGTATTCTCAGGCAGATGGGCAACCCCAAGAAGATCGATTGGGAGGCACT
GCCGGCGTTGTGGACCGAGGAGCTACCGGCCAGGGGGGGGGAGGGCGAGG
AGGTGCCCGTCAAGGCCGTTCAGGCCTTCTCCTTGGATGAAGATTTCTGA
GGGAAGAACGCAGGCGAGGGTAGAGAATTTGAGAAAAGGGCACAGTAAAA
GGCAACAACCCGCACCTTCTTGGAAAAA back to topprotein sequence of rna5912 >rna5912-protein ID=rna5912-protein|Name=rna5912|organism=Nannochloropsis gaditana|type=polypeptide|length=126bp
MRRAGGRNWVSCGEISSCCQPDIYDDLMSVHCSAALTSFVPSSFPPSLLL
SFPFPRRPPLPAVPARTALASLPLARHALFLPLPFHVLLAPALPSCLPPS
FDPAGEASRSTSEGVGEEDSFVWERG back to topmRNA from alignment at CM002467.1:64092..64806- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5912 ID=rna5912|Name=rna5912|organism=Nannochloropsis gaditana|type=mRNA|length=715bp|location=Sequence derived from alignment at CM002467.1:64092..64806- (Nannochloropsis gaditana)
GTCGGTCTGGGACGTGGTCAGGGCCGAGAAGAATGGAAGGTTCCGGAACG
TTCTGTATGCGGGGAGAGGTGCGTCATGGTGGTGAAGGAGATGGAGGGAA
GGAGGGGAAGAGATGAGGAGGGCGGGAGGGAGGAACTGGGTTTCTTGTGG
GGAGATATCTTCATGCTGTCAGCCAGACATATATGACGACTTGATGTCTG
TGCATTGCTCCGCCGCCCTCACTTCCTTCGTCCCATCCTCCTTCCCTCCT
TCCCTCCTTCTCTCCTTCCCTTTTCCTAGACGTCCCCCCCTTCCGGCTGT
ACCCGCGCGTACAGCCCTGGCATCTCTCCCTCTGGCGAGACATGCACTCT
TCCTCCCCCTCCCCTTCCACGTCCTCCTCGCTCCCGCCCTCCCTTCCTGC
CTCCCTCCCTCCTTCGATCCTGCGGGAGAAGCTTCTAGAAGCACGAGTGA
GGGAGTTGGAGAAGAAGATAGCTTCGTGTGGGAAAGAGGCTGAGGAGGGA
AAGTCGACCGATAGGAAATAAGAGAGAGAATGGGAGAAATCGAAGGGAGC
AAGGAAGGAGATTATATTGATATTGATTGCCGAACTGTTCGATCCCTGAG
AAAGATGGGGAGGTTGGGGTAGAAAGTAGGAACGATATAATATGATATGT
ATCGCTAGCTAGGGAGTTGACAAGGAAAAAAGTACCCTGACGAAGGCCGC
CGTCACGATTTTTCC back to topCoding sequence (CDS) from alignment at CM002467.1:64092..64806- >rna5912 ID=rna5912|Name=rna5912|organism=Nannochloropsis gaditana|type=CDS|length=381bp|location=Sequence derived from alignment at CM002467.1:64092..64806- (Nannochloropsis gaditana)
ATGAGGAGGGCGGGAGGGAGGAACTGGGTTTCTTGTGGGGAGATATCTTC
ATGCTGTCAGCCAGACATATATGACGACTTGATGTCTGTGCATTGCTCCG
CCGCCCTCACTTCCTTCGTCCCATCCTCCTTCCCTCCTTCCCTCCTTCTC
TCCTTCCCTTTTCCTAGACGTCCCCCCCTTCCGGCTGTACCCGCGCGTAC
AGCCCTGGCATCTCTCCCTCTGGCGAGACATGCACTCTTCCTCCCCCTCC
CCTTCCACGTCCTCCTCGCTCCCGCCCTCCCTTCCTGCCTCCCTCCCTCC
TTCGATCCTGCGGGAGAAGCTTCTAGAAGCACGAGTGAGGGAGTTGGAGA
AGAAGATAGCTTCGTGTGGGAAAGAGGCTGA back to top
|