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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100446g2.5999.mrna |
| Orig protein id | gnl|cribi|Naga_100446g2.5999 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:58105..58936 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5909 ID=rna5909|Name=rna5909|organism=Nannochloropsis gaditana|type=mRNA|length=867bp
ATGCATAAGCGGCGGTGCTCCTCCTTACTAGGTTTGTGGGCCATCAGGAC
GCTGTATGCATTGAATCGTGCCGGTGTTGGGGCCTTTCAATCGCGTGGAT
TCAGTGGGCCGGGATTGCTTGGAATAGGAGGACCACGGGCAGGGCAGAAG
CAGCCCTTGCACCATCAATGTCGAGGTTACCCGTACCCGTCGTCTCCTGT
CTTGTACCATCACGGAAATTTGTGGCTACCGCCCAAGCGCCATGCCGGCG
TCATGGCATCGAAGGGGGCGGGGGAGCCGAGGCCGGCGGACCCGAGTGCG
CGGGAAGATGAGGGGAAAAGACATGAAGGATTGGGGGCAGAAGACGAAAA
ATTGGAGTTTTCAGAGGCGGATTTGGCGGCATTGGAGCAGGAATTTTTTA
CGGAGAACCCCAAAGCCCGTCGCCGCCGCCTCCGGGAGAGCAACCGTCGG
GCCAAAGAGCAGGAACTCAAGAAGAAGGGGAAAAATGGCGCGAAAGAGTC
CAGGGGCCCAGGCAACCCGCATAACGAGGCAGGCAAGGAGAAGGCAGCGC
TGCAGCGGGAAGCGGGACCGGCTTCGGCCACGAACGAAGAGGAAGCATTG
CGACAGGCAAAAATCTACCGAAAGGTGGAGGCCCCCAAGCGCCTTGTGGA
GCTGGCAGGCATCGCCGCGGTCGGTGGTGACAAAGGCGATGCTGAAGAAA
GAGGACATAAGTGGGGCATCGCGCCTGCTTCGAACCGTGGTGCGGTGGCA
TCTCCTACCTCCCATGGAGATTTGCAACGAATTGCTCCGCTTGCAAGGAA
AGCAACGTCGGGTGGACGCCATGTTCGCCACGTTGGATCTGATGCGGGAG
GGTGGGGTGCACCCTGA back to topprotein sequence of rna5909 >rna5909-protein ID=rna5909-protein|Name=rna5909|organism=Nannochloropsis gaditana|type=polypeptide|length=165bp
MTTNSNDGSSYGSSGPSRPPASPPSRVDGEELAPSASRPSPLCLDGEATD
AAAKMEKEDAASIIGVAGVSGTPSLESTVPEGNTTEKPPEEDVDLSNLMT
LLFQHLRTDEGRAEFQRLVDAEEAKEGAEECQEVKDREEIDRPRTEGGDA
EDGHAASSVTTVEST back to topmRNA from alignment at CM002467.1:58105..58936+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5909 ID=rna5909|Name=rna5909|organism=Nannochloropsis gaditana|type=mRNA|length=832bp|location=Sequence derived from alignment at CM002467.1:58105..58936+ (Nannochloropsis gaditana)
GATGCCTGGAGGGCACTTCGCATGTGTACCTTGAATGACACAAATGTAAT
TTTAACCCGCTCCCACGCTCCTCATACGCAGACTCGACGAAATAAATGAC
CACCAACTCCAACGATGGGAGCAGCTATGGAAGCTCAGGTCCTTCCAGGC
CACCAgcatcacctccctcccgtgtcGATGGGGAAGAACTCGCTCCCTCA
GcgtcccgcccctccccgctttgCTTGGATGGGGAGGCCACTGACGCCGC
cgcaaaaatggaaaaggaagatgcTGCTTCGATCATCGGCGTAGCAGGGG
TCTCCGGAACGCCTTCGTTGGAGAGCACCGTGCCGGAAGGGAATACGACG
GAGAAGCCTccagaggaagacgtggattTGAGTAACTTGATGACCCTGTT
ATTTCAGCATCTTCGCACTGATGAGGGTCGGGCTGAATTCCAACGCTTGG
TCGATGCCGAGGAAGCGAAAGAAGGCGCAGAAGAGTGCCAGGAGGTAAAG
GATCGGGAAGAGATTGACAGACCGAGAACCGAAGGTGGAGacgcggagga
cgggcatgCAGCTTCGTCGGTTACGACCGTGGAAAGCACATAATTCTACG
TTTCAGACTTTCTAGCGTAATGTTATAATGAAGAGCTTTGTAATTTTGCT
TTACACAAAATCAGAAGCAATCGAGCTTGATGGGTGGCTTTGAGCCAGCG
AAGCGAAAATTGCATGTACAACCACAAGAGTATGCGAcgatcttttcttt
tctttgtctccGTAGATAATAAAACTATTAATATGCGGGGCTTTTTGTAG
ACATGATTTCCAGAATATAATCGCATTACGAC back to topCoding sequence (CDS) from alignment at CM002467.1:58105..58936+ >rna5909 ID=rna5909|Name=rna5909|organism=Nannochloropsis gaditana|type=CDS|length=498bp|location=Sequence derived from alignment at CM002467.1:58105..58936+ (Nannochloropsis gaditana)
ATGACCACCAACTCCAACGATGGGAGCAGCTATGGAAGCTCAGGTCCTTC
CAGGCCACCAgcatcacctccctcccgtgtcGATGGGGAAGAACTCGCTC
CCTCAGcgtcccgcccctccccgctttgCTTGGATGGGGAGGCCACTGAC
GCCGCcgcaaaaatggaaaaggaagatgcTGCTTCGATCATCGGCGTAGC
AGGGGTCTCCGGAACGCCTTCGTTGGAGAGCACCGTGCCGGAAGGGAATA
CGACGGAGAAGCCTccagaggaagacgtggattTGAGTAACTTGATGACC
CTGTTATTTCAGCATCTTCGCACTGATGAGGGTCGGGCTGAATTCCAACG
CTTGGTCGATGCCGAGGAAGCGAAAGAAGGCGCAGAAGAGTGCCAGGAGG
TAAAGGATCGGGAAGAGATTGACAGACCGAGAACCGAAGGTGGAGacgcg
gaggacgggcatgCAGCTTCGTCGGTTACGACCGTGGAAAGCACATAA back to top
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