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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100446g1.5997.mrna |
| Orig protein id | gnl|cribi|Naga_100446g1.5997 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:54994..57716 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5908 ID=rna5908|Name=rna5908|organism=Nannochloropsis gaditana|type=mRNA|length=737bp
TCCCCAAGGTCCCCTTGGCCGAAAAGAGCAAGTGGGCCTCCTTCTTCGAG
TCCTACCTCGCCCAGCGTTCTTCCCTCAAAGTTGTCTTCCATCTCATCGA
CTCCCGTCACGGCCCGCTTGCCCAAGATCTGATGACCATGGAGGCAATGC
GAGCCTCCCTGCGGCCGGGCGTACAGTACGTCATCATCCTTACCAAGGCG
GACAAGAAGGACGGCAAAGTCTCTCCTTCTTTGAAGCAACAAGTAGCAGA
CGCATTGGAGGCCCATCAGTTGAAGGAGACCACCCCCGTCCTCGTGACCA
GCGCCGTGAACCGGCTGGGGCGGGACGAGGTGTGGCGATACCTGCGTCTG
GCAGTGACCAAGCCGGAGGAAAACCGTTGAGGGGGAGGGTGGGGGTTAAG
GTGGGGGACGGGAAGGGAGGATGTTTCTCGAGTGTCGGGACGGTCGCGGC
TGCCTTCTGTCTTCCTCTTGACGCGGTGTATATGCTCAAACCATTGGTTT
TTTAAGGCAAGAGATCGATAAAGAAATGTATCAAAACCCTTAGAATAGTA
CCCTCGCGTCGCGGTGTGCGTGCTTTTACAAGAACCTCGGATTAAAGTCA
ACTTCTTCCCGTGCGTCTTCTCCTCTCTGAACCAGCCTCTCCCGCTCTCA
CAGCACATCAGACAGAGCCCTTTCAACCCTTCCCTCTTTGTAGCTTGGTT
TCCGCGTCCTCCCTTACCAGGCTCTCCTCTCATTTCC back to topprotein sequence of rna5908 >rna5908-protein ID=rna5908-protein|Name=rna5908|organism=Nannochloropsis gaditana|type=polypeptide|length=288bp
MHKRRCSSLLGLWAIRTLYALNRAGVGAFQSRGFSGPGLLGIGGPRAGQK
QPLHHQCRGYPYPSSPVLYHHGNLWLPPKRHAGVMASKGAGEPRPADPSA
REDEGKRHEGLGAEDEKLEFSEADLAALEQEFFTENPKARRRRLRESNRR
AKEQELKKKGKNGAKESRGPGNPHNEAGKEKAALQREAGPASATNEEEAL
RQAKIYRKVEAPKRLVELAGIAAVGGDKGDAEERGHKWGIAPASNRGAVA
SPTSHGDLQRIAPLARKATSGGRHVRHVGSDAGGWGAP back to topmRNA from alignment at CM002467.1:54994..57716- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5908 ID=rna5908|Name=rna5908|organism=Nannochloropsis gaditana|type=mRNA|length=2723bp|location=Sequence derived from alignment at CM002467.1:54994..57716- (Nannochloropsis gaditana)
ATGCATAAGCGGCGGTGCTCCTCCTTACTAGGTTTGTGGGCCATCAGGAC
GCTGTATGCATTGAATCGTGCCGGTGTTGGGGCCTTTCAATCGCGTGGAT
TCAGTGGGCCGGGATTGCTTGGAATAGGAGGACCACGGGCAGGGCAGAAG
CAGCCCTTGCACCATCAATGTCGAGGTGAGTGTTTATTGTACCTCCCCCT
TCTCCTTCGTGAGTCTCCTCTACGCCGAAATACTAATGTAGAGACGACCA
TTTCATGGCCTCTTGCCGGATGCTTTTTTTCTGTACCTTTTCTTGCTTTC
CCTTTTTCACCCTCCCACCATGAAAACCTTTACCACAAAAAAGTGATCAT
GCGGTTTTCAGCTATGCTTTTCCACGCCACAATTCCTAGGTTACCCGTAC
CCGTCGTCTCCTGTCTTGTACCATCACGGAAATTTGTGGCTACCGCCCAA
GCGCCATGCCGGCGTCATGGCATCGAAGGGGGCGGGGGAGCCGAGGCCGG
CGGACCCGAGTGCGCGGGAAGATGAGGGGAAAAGACATGAAGGATTGGGG
GCAGAAGACGAAAAATTGGAGTTTTCAGAGGCGGATTTGGCGGCATTGGA
GCAGGAATTTTTTACGGTAGGTTGTCGAGTGGGAAGGGGGAAGGGAGGGG
GGGAAGATGGAAGGCAAGGCATTGGGGAGGCGATGACTGGATGAGGAGGA
GGCGCAAGGCGAAGTGGAGGGAGGAAGGAAGAAGAGGAGGAAGGGGCTGG
ATATAGATAGGGTAGATGGGAAGAAAGGCTGTCAAGGGCATTATTGTGAA
GAAAGGTTTCTTAGGGAGGGGCTGGAGGATAGGAGGGCGCTTAAAGTAAG
ATGGGGGGTACGCACTGTATGCTTAGGGTGGGGGGGGAGGTGATGCGATG
AGAGTGAGCCAAGTTAGGACTGTGTGACTGGGACCAGGAGCAGGGCGATA
CATGATGAGAGCTTGAAGTAGGATGTGCTGTCTTGGAGAGGGGAGGATCG
GAGGGAGCGGACGACAGGAAAGGAGGAGGAAAGCGAGGGGCAAGTGGCCC
CTACCATGTCCGAGACCCTTTCCGCTTCCCTCCCTCCCACTTTTTTCTCC
CTCCGTCCTTCCCTCCCTCCCTCCTTCTTCCCTCTCTCAGGAGAACCCCA
AAGCCCGTCGCCGCCGCCTCCGGGAGAGCAACCGTCGGGCCAAAGAGCAG
GAACTCAAGAAGAAGGGGAAAAATGGCGCGAAAGAGTCCAGGGGCCCAGG
CAACCCGCATAACGAGGCAGGCAAGGAGAAGGCAGCGCTGCAGCGGGAAG
CGGGACCGGCTTCGGCCACGAACGAAGAGGAAGCATTGCGACAGGCAAAA
ATCTACCGAAAGGTGCGTAAAATCAAAGATGGACGCTGTTTCCCTCTTCC
CCTTGGTGTGTCAGGAGGGCGGGGAGGAGGGAAACGGGAGGAGACCTTCT
CTTGGTCGGGGGACAGGGGGAGAGCGAGGGAGGCTACTCGGTGAGACCTG
CTCTCTTCCAGCCTGGGAGAGAGAGCAAGGTCAACGTGGCTCGTTGGTCC
TCCACGTGCTCCTCGAGTCCCTGTCTGTGGAAGATTGGACAGCCGGGCTT
TGCAGTTTCCTGACCTTGATTCGTCGCGTCCCCTCTTTTCCCCGTGCGCG
CCGTTGCCCTGCGGTTGTCGTTCCCCCTTTCGCTTCGCCTACTTCCCCTC
TTTCCCTCCCCTCCACGCCTTCAGGTGGAGGCCCCCAAGCGCCTTGTGGA
GCTGGCAGGCATCGCCGCGGTCGGTGGGTTTCTCACCCCGCAAGTCCTCA
AGGTCTCTTTATCGCTCCCCTCCTTCCTCCTTCCTTCCTCCTTTCCGCCT
TTCTCGTCCCATTTTCCTTCTCCCTTTGCTTCCGTCAGGCGTTTTGTTTT
TTTTTCCTGTTCCCCTTCCTTTCTACCCCTTCCTCTCCCTCCTCAATCCT
GAGGCACCTTCTGACCGTTGAGTGCTCGATTGCTTCCTTCTTTTCCTCCT
TCCATCCCTCGCTCCCTCCCTCCCTCCCTCCCTTCATTTTCCGAACCCTC
ATTTCCCTCCCTCCTCCGCTCCTTCCACGTGCATCATTCAGGTGGTTGCG
CGCGCAGAAATGGAGTTAAGGAGGCCGGACCTTGCCTCCCTCGTTCTCGA
AGAGGCCTTTACATGTTGGCGGGAAAAGCTCTCCCGGCTGGAGGAAGGGG
AGGAAGGGGAAGAGGGAGGGAAAAGGGAGGAAGAGCTCGCTGCATGCTAC
GCAGAGGCCATGAAATGGCTGTGTCGGCTAAGTTCAGGGAGGGAGGAAGG
GCGGGAGGGCGGGAAAGAGGGAGGGAAGGGGGTGGAGAAAAAGGCGGAAA
GCCGCAGCCGGGAGGAGGAAGTGGGAGACCGGCGGGGAAGGAGCATGGCC
ACGGCCTTGGACATATTGGCCTTGTTGGGTCTGACGGGAGGGCGGGAGGA
AGGGAGGGAGGGAGGTGGAGAAGGGGAGGGAATCGGTGTGTTGCGGCTTT
CGAATGACGCGGCCCTGGGGATGTTGACGACAGTGACAAAGGCGATGCTG
AAGAAAGAGGACATAAGTGGGGCATCGCGCCTGCTTCGAACCGTGGTGCG
GTGGCATCTCCTACCTCCCATGGAGATTTGCAACGAATTGCTCCGCTTGC
AAGGAAAGCAACGTCGGGTGGACGCCATGTTCGCCACGTTGGATCTGATG
CGGGAGGGTGGGGTGCACCCTGA back to topCoding sequence (CDS) from alignment at CM002467.1:54994..57716- >rna5908 ID=rna5908|Name=rna5908|organism=Nannochloropsis gaditana|type=CDS|length=4335bp|location=Sequence derived from alignment at CM002467.1:54994..57716- (Nannochloropsis gaditana)
TGACAAAGGCGATGCTGAAGAAAGAGGACATAAGTGGGGCATCGCGCCTG
CTTCGAACCGTGGTGCGGTGGCATCTCCTACCTCCCATGGAGATTTGCAA
CGAATTGCTCCGCTTGCAAGGAAAGCAACGTCGGGTGGACGCCATGTTCG
CCACGTTGGATCTGATGCGGGAGGGTGGGGTGCACCCTGAGTGGAGGCCC
CCAAGCGCCTTGTGGAGCTGGCAGGCATCGCCGCGGTCGGTGGGAGAACC
CCAAAGCCCGTCGCCGCCGCCTCCGGGAGAGCAACCGTCGGGCCAAAGAG
CAGGAACTCAAGAAGAAGGGGAAAAATGGCGCGAAAGAGTCCAGGGGCCC
AGGCAACCCGCATAACGAGGCAGGCAAGGAGAAGGCAGCGCTGCAGCGGG
AAGCGGGACCGGCTTCGGCCACGAACGAAGAGGAAGCATTGCGACAGGCA
AAAATCTACCGAAAGGTTACCCGTACCCGTCGTCTCCTGTCTTGTACCAT
CACGGAAATTTGTGGCTACCGCCCAAGCGCCATGCCGGCGTCATGGCATC
GAAGGGGGCGGGGGAGCCGAGGCCGGCGGACCCGAGTGCGCGGGAAGATG
AGGGGAAAAGACATGAAGGATTGGGGGCAGAAGACGAAAAATTGGAGTTT
TCAGAGGCGGATTTGGCGGCATTGGAGCAGGAATTTTTTACGATGCATAA
GCGGCGGTGCTCCTCCTTACTAGGTTTGTGGGCCATCAGGACGCTGTATG
CATTGAATCGTGCCGGTGTTGGGGCCTTTCAATCGCGTGGATTCAGTGGG
CCGGGATTGCTTGGAATAGGAGGACCACGGGCAGGGCAGAAGCAGCCCTT
GCACCATCAATGTCGAGTGACAAAGGCGATGCTGAAGAAAGAGGACATAA
GTGGGGCATCGCGCCTGCTTCGAACCGTGGTGCGGTGGCATCTCCTACCT
CCCATGGAGATTTGCAACGAATTGCTCCGCTTGCAAGGAAAGCAACGTCG
GGTGGACGCCATGTTCGCCACGTTGGATCTGATGCGGGAGGGTGGGGTGC
ACCCTGAGTGGAGGCCCCCAAGCGCCTTGTGGAGCTGGCAGGCATCGCCG
CGGTCGGTGGGAGAACCCCAAAGCCCGTCGCCGCCGCCTCCGGGAGAGCA
ACCGTCGGGCCAAAGAGCAGGAACTCAAGAAGAAGGGGAAAAATGGCGCG
AAAGAGTCCAGGGGCCCAGGCAACCCGCATAACGAGGCAGGCAAGGAGAA
GGCAGCGCTGCAGCGGGAAGCGGGACCGGCTTCGGCCACGAACGAAGAGG
AAGCATTGCGACAGGCAAAAATCTACCGAAAGGTTACCCGTACCCGTCGT
CTCCTGTCTTGTACCATCACGGAAATTTGTGGCTACCGCCCAAGCGCCAT
GCCGGCGTCATGGCATCGAAGGGGGCGGGGGAGCCGAGGCCGGCGGACCC
GAGTGCGCGGGAAGATGAGGGGAAAAGACATGAAGGATTGGGGGCAGAAG
ACGAAAAATTGGAGTTTTCAGAGGCGGATTTGGCGGCATTGGAGCAGGAA
TTTTTTACGATGCATAAGCGGCGGTGCTCCTCCTTACTAGGTTTGTGGGC
CATCAGGACGCTGTATGCATTGAATCGTGCCGGTGTTGGGGCCTTTCAAT
CGCGTGGATTCAGTGGGCCGGGATTGCTTGGAATAGGAGGACCACGGGCA
GGGCAGAAGCAGCCCTTGCACCATCAATGTCGAGTGACAAAGGCGATGCT
GAAGAAAGAGGACATAAGTGGGGCATCGCGCCTGCTTCGAACCGTGGTGC
GGTGGCATCTCCTACCTCCCATGGAGATTTGCAACGAATTGCTCCGCTTG
CAAGGAAAGCAACGTCGGGTGGACGCCATGTTCGCCACGTTGGATCTGAT
GCGGGAGGGTGGGGTGCACCCTGAGTGGAGGCCCCCAAGCGCCTTGTGGA
GCTGGCAGGCATCGCCGCGGTCGGTGGGAGAACCCCAAAGCCCGTCGCCG
CCGCCTCCGGGAGAGCAACCGTCGGGCCAAAGAGCAGGAACTCAAGAAGA
AGGGGAAAAATGGCGCGAAAGAGTCCAGGGGCCCAGGCAACCCGCATAAC
GAGGCAGGCAAGGAGAAGGCAGCGCTGCAGCGGGAAGCGGGACCGGCTTC
GGCCACGAACGAAGAGGAAGCATTGCGACAGGCAAAAATCTACCGAAAGG
TTACCCGTACCCGTCGTCTCCTGTCTTGTACCATCACGGAAATTTGTGGC
TACCGCCCAAGCGCCATGCCGGCGTCATGGCATCGAAGGGGGCGGGGGAG
CCGAGGCCGGCGGACCCGAGTGCGCGGGAAGATGAGGGGAAAAGACATGA
AGGATTGGGGGCAGAAGACGAAAAATTGGAGTTTTCAGAGGCGGATTTGG
CGGCATTGGAGCAGGAATTTTTTACGATGCATAAGCGGCGGTGCTCCTCC
TTACTAGGTTTGTGGGCCATCAGGACGCTGTATGCATTGAATCGTGCCGG
TGTTGGGGCCTTTCAATCGCGTGGATTCAGTGGGCCGGGATTGCTTGGAA
TAGGAGGACCACGGGCAGGGCAGAAGCAGCCCTTGCACCATCAATGTCGA
GTGACAAAGGCGATGCTGAAGAAAGAGGACATAAGTGGGGCATCGCGCCT
GCTTCGAACCGTGGTGCGGTGGCATCTCCTACCTCCCATGGAGATTTGCA
ACGAATTGCTCCGCTTGCAAGGAAAGCAACGTCGGGTGGACGCCATGTTC
GCCACGTTGGATCTGATGCGGGAGGGTGGGGTGCACCCTGAGTGGAGGCC
CCCAAGCGCCTTGTGGAGCTGGCAGGCATCGCCGCGGTCGGTGGGAGAAC
CCCAAAGCCCGTCGCCGCCGCCTCCGGGAGAGCAACCGTCGGGCCAAAGA
GCAGGAACTCAAGAAGAAGGGGAAAAATGGCGCGAAAGAGTCCAGGGGCC
CAGGCAACCCGCATAACGAGGCAGGCAAGGAGAAGGCAGCGCTGCAGCGG
GAAGCGGGACCGGCTTCGGCCACGAACGAAGAGGAAGCATTGCGACAGGC
AAAAATCTACCGAAAGGTTACCCGTACCCGTCGTCTCCTGTCTTGTACCA
TCACGGAAATTTGTGGCTACCGCCCAAGCGCCATGCCGGCGTCATGGCAT
CGAAGGGGGCGGGGGAGCCGAGGCCGGCGGACCCGAGTGCGCGGGAAGAT
GAGGGGAAAAGACATGAAGGATTGGGGGCAGAAGACGAAAAATTGGAGTT
TTCAGAGGCGGATTTGGCGGCATTGGAGCAGGAATTTTTTACGATGCATA
AGCGGCGGTGCTCCTCCTTACTAGGTTTGTGGGCCATCAGGACGCTGTAT
GCATTGAATCGTGCCGGTGTTGGGGCCTTTCAATCGCGTGGATTCAGTGG
GCCGGGATTGCTTGGAATAGGAGGACCACGGGCAGGGCAGAAGCAGCCCT
TGCACCATCAATGTCGAGTGACAAAGGCGATGCTGAAGAAAGAGGACATA
AGTGGGGCATCGCGCCTGCTTCGAACCGTGGTGCGGTGGCATCTCCTACC
TCCCATGGAGATTTGCAACGAATTGCTCCGCTTGCAAGGAAAGCAACGTC
GGGTGGACGCCATGTTCGCCACGTTGGATCTGATGCGGGAGGGTGGGGTG
CACCCTGAGTGGAGGCCCCCAAGCGCCTTGTGGAGCTGGCAGGCATCGCC
GCGGTCGGTGGGAGAACCCCAAAGCCCGTCGCCGCCGCCTCCGGGAGAGC
AACCGTCGGGCCAAAGAGCAGGAACTCAAGAAGAAGGGGAAAAATGGCGC
GAAAGAGTCCAGGGGCCCAGGCAACCCGCATAACGAGGCAGGCAAGGAGA
AGGCAGCGCTGCAGCGGGAAGCGGGACCGGCTTCGGCCACGAACGAAGAG
GAAGCATTGCGACAGGCAAAAATCTACCGAAAGGTTACCCGTACCCGTCG
TCTCCTGTCTTGTACCATCACGGAAATTTGTGGCTACCGCCCAAGCGCCA
TGCCGGCGTCATGGCATCGAAGGGGGCGGGGGAGCCGAGGCCGGCGGACC
CGAGTGCGCGGGAAGATGAGGGGAAAAGACATGAAGGATTGGGGGCAGAA
GACGAAAAATTGGAGTTTTCAGAGGCGGATTTGGCGGCATTGGAGCAGGA
ATTTTTTACGATGCATAAGCGGCGGTGCTCCTCCTTACTAGGTTTGTGGG
CCATCAGGACGCTGTATGCATTGAATCGTGCCGGTGTTGGGGCCTTTCAA
TCGCGTGGATTCAGTGGGCCGGGATTGCTTGGAATAGGAGGACCACGGGC
AGGGCAGAAGCAGCCCTTGCACCATCAATGTCGAG back to top
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