rna5903, rna5903 (mRNA) Nannochloropsis gaditana

Overview
Namerna5903
Unique Namerna5903
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1432
Alignment locationCM002467.1:36919..37798 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102211g1.1299.mrna
Orig protein idgnl|cribi|Naga_102211g1.1299
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002467.1supercontigCM002467.1:36919..37798 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102211g1gene5698Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM24785.1cds5888Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna5903rna5903-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna5903 ID=rna5903|Name=rna5903|organism=Nannochloropsis gaditana|type=mRNA|length=1432bp
ATAGGCGGCCAACAGCCAGGCCACCAGTCGGGCCCAATACGTGCAGAAGT
ACACCCTGCTCGAGAAGGACTTCAGCGAGAAGGAGGGCGACCTGACGCCG
ACGCTGAAGCTGAAGAGGAGCGTGGTAGCCAAGAAGCATGCGGCCTTGAT
CGAGTCCCTGTACGCGTGAGGGGGGAAGGGACGGAGGAAGGGAGGGAGAG
TCTGGGGAGAGGATGTTGAAGCGCGGCCAAGGGAGAGAGGATAACAGCCT
TGGGAGGAGAGGGGCACGGAGTGCGCGTTGTCGCCTGAGTTTTAAATCCT
TTGGGTGTGAGAGCACGGCGTCAGGGAAGCTGTCGATGTTTCAAGATATG
ATACAATGAGCAGTGGAAGTAGAAGCAGAGAGGGCGACGCGCGCATGGCC
GGTGTGTATATAGAGGAGCGTTCGTGTGAGTGATAGTGCGTGTCTGTATG
TGTACGTGTCTTTTTTTATTGGAGAGTCAGAGAAATTTTCCGCCTGTGGA
CCGAAGAGCGGGCAGCTGGGCCGGTATAGAGCCCAAGTCCTTGCTTTGTG
GTGAGGGGAGGACTAGGCGAGGGAGGGAGGAAGAGAGGAAGGGAGAGAGG
GAGGGAAGGAGAGACAGAGGCTGGGGCAGGAGGGGTAGGGGAGTGTGGGG
ACCATGGCGTCAATGTCCGGGTAAGTGCGTCCTACTCTTGATGGTCGCTT
GCTTCGGCTTGGGCCCTGACGCCCGCGGCGGGGGCAGGGTAAGCTTGCTT
GTGGCAGCTCCGGCTGTCTGCTCGCCACGCCCGGCCCGTGCAATGCCTTT
CCGATACAGATAGAAACGCGTGAGGTGGTGGAACGGCCTTTTGATCCTGT
CGCATCTGAGAGATTTTATGTCAAACATGGTCATTTATCCGGCGATAGCT
GTGATGGTGTCCAGGCGGAGAGGGACGGTGGAGGTGCCTGAAGAAAGACA
TGTCACGACTAACGCGGTTGCCGCATGGCTCCGTGCCAGATAGGTTCGCT
GCACACATAAAGGCTTTCGCTGGGTGGGGTGTATTGATAGTGCTTGATTT
GGCTTGTGGGGTATGCTTATCGTCTGAACTTTCCTGTCCCTCCTTCCTCC
CTTGTCCCCTTCGGAACCTCCCACCAGCCGCCAGTGGGGCGTATCGTGTT
ACATTGCTTTTGAGAAACCGCTAATCCAGCACAATCCTCTCGGGATCACC
CTTTTACCCTAATCCCTTCCGCCCGTCGTGCCGCTTCCCGCGACGAAAAA
TCCAACGGAGCTCGCGTCAATGCTTTTCTTCCCCTCTCTTTGCTCTTTTC
TGGAAACCAAATCCCTCTCCGTCACGCCCGTGGATCCAGCTCCCTTCGTA
CGAGACCCTCGATTTCTGATTGACTCACTTACTTTCATTCAAAGACGCTT
ATTCACATCGCCAATACATTTCCAGGGCCACC
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protein sequence of rna5903

>rna5903-protein ID=rna5903-protein|Name=rna5903|organism=Nannochloropsis gaditana|type=polypeptide|length=124bp
MGETRNVPPSSLWRTRCSARRVPLPPSLPPSLPPFCSRFLCVTPFRSMSI
PLLSPAFPPSFPPSLPPSLPPSRPPFLPLTHSVPVFPFLRSSLHRCRLEN
HLTHPTSTFPPSFPSFPPPLPPFR
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mRNA from alignment at CM002467.1:36919..37798-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna5903 ID=rna5903|Name=rna5903|organism=Nannochloropsis gaditana|type=mRNA|length=880bp|location=Sequence derived from alignment at CM002467.1:36919..37798- (Nannochloropsis gaditana)
CCCGCTCCCTCTTCGCCTTCTCAGCGACACACTTAAGGTGACGATGAAAA
CGCACATCCTCTCCACTCAATATGGGAGAGACGAGGAACGTCCCACCCTC
CTCCCTCTGGCGGACAAGATGTTCGGCAAGGCGAGTGCCCCTCCCTCCTT
CCCTCCCTCCCTCCCTTCCTCCATTCTGCTCTAGATTTCTCTGCGTGACT
CCTTTTCGGTCTATGTCCATCCCTCTTCTGTCTCCCGCCTTCCCGCCCTC
CTTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCTTCCCGCCCCCCTTTCC
TCCCTCTTACCCACTCTGTACCCGTTTTTCCCTTCCTGCGCTCAAGCCTC
CATCGATGTCGGTTGGAAAATCACCTCACACACCCCACATCTACCTTCCC
TCCCTCTTTCCCCTCCTTTCCTCCTCCCCTCCCTCCCTTCAGGTGAAGGA
GAAGCTGGGGCTGGACATGGGCCGTTACTGTGCCACCGGGGCGGCGCCCC
TCTCGGCGGATATTCAGGTAAGGATCGTGTGGCAGCCTGCACGAATAGGA
GCACTCGAGGCACCATGCATGGGGGTGGCGATGGACTTTACTCGCTGCGT
GCGTGTGTCTGTGTCGATGACCGTCTCTCCGGCTTGCTCGGTGGTGGACC
GCGTGTGGAACATGATACCCGGATTTCGCCCCAGTGAATCCCCTCGCACA
GCCATAGAGCGCCCTGTCGTCTCATTATCATGCGGCAGAGAGGGAGAGGG
AGGAGATGGCGATAGTTGGCGTAGCTATCTGTCAGCGGCCACGCGCGGCA
CTGACCCTGTGACTCGGTTTTTCCCCTCCACAGGAGTACTTCGCCTCCAT
CGGCATCACTATCTTCGAGGTCTTTGGCCA
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Coding sequence (CDS) from alignment at CM002467.1:36919..37798-

>rna5903 ID=rna5903|Name=rna5903|organism=Nannochloropsis gaditana|type=CDS|length=375bp|location=Sequence derived from alignment at CM002467.1:36919..37798- (Nannochloropsis gaditana)
ATGGGAGAGACGAGGAACGTCCCACCCTCCTCCCTCTGGCGGACAAGATG
TTCGGCAAGGCGAGTGCCCCTCCCTCCTTCCCTCCCTCCCTCCCTTCCTC
CATTCTGCTCTAGATTTCTCTGCGTGACTCCTTTTCGGTCTATGTCCATC
CCTCTTCTGTCTCCCGCCTTCCCGCCCTCCTTCCCTCCTTCCCTCCCTCC
CTCCCTCCCTCCTTCCCGCCCCCCTTTCCTCCCTCTTACCCACTCTGTAC
CCGTTTTTCCCTTCCTGCGCTCAAGCCTCCATCGATGTCGGTTGGAAAAT
CACCTCACACACCCCACATCTACCTTCCCTCCCTCTTTCCCCTCCTTTCC
TCCTCCCCTCCCTCCCTTCAGGTGA
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Synonyms
Publications