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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100725g1.712.mrna |
| Orig protein id | gnl|cribi|Naga_100725g1.712 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002467.1 | supercontig | CM002467.1:34247..35678 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5902 ID=rna5902|Name=rna5902|organism=Nannochloropsis gaditana|type=mRNA|length=2529bp
TGGTATTCTTGTCGTCAGCGAGGGAGGCAGAGCGACATGAGAAGCCCCGA
GAAGTGGAAGGGCGGAAATACCCTATGCATCACACGAAATAATGTTCCGG
GGACGCGCTTCCACCGCGCGTCAACGCAAGAGTAGTGTAATCGACTCATC
CATTGAATGCAGTCGGGTGATGTTCTGCAAATTACCTGTATTTCTGGTGA
TTTTAAGCTTTTCATGTCCTCCACCTCCCCACTCGGGGACTGGCCCTCCG
GCGAATGTTACATCACATCTACAGCTTCACCTTCATCGGATTCATGCAAA
AGTGCTCACGGCTATCTACCATCTCCCATATATAACAAAAACAGGATTTG
TAGCGCAACCACAGAGGTGGAAGACTGTAGCGTCACTCAGAATGGCGCTA
CGCCCTGCGGGGGCCTCGAGTGCTGACATGCTTCGTCTCATCATCACCGG
CCTTCGGACTCTTCTCCTCCTCCTCTCCCTATGGGAACTGGCACTCTCGA
ACTTCTTCCTGCTCTCACCACACATAGTGTCAGGCCCGACTATACAGGCC
TGGAGCTTCACCTCCCCGGCCTCTACCTCGACCCCCCTCTCCCCCTCCTC
GACTTCCGCTTCCCCCCAGGAAAGTATTGCCTGTAGCCTCTTCTACTACA
AGCTGTGTGCAGCTTCTTCGGTTCTGGTGGGACGGGGGCTGCTGGCCACC
AGCCTCGGTCTAGCGATAGCGCTCGTCCTGCTCCTTTTCCGGGTATCATG
GGACGCTTGTACTCCCATCGGCGGCCCTTGGAAGGATCTCTTTGTTCCAC
GTCTGGGTGCCGAGGAAGGGCCGGAGGACTCACCCTCGCCCTTCCTCCTT
CCCGCCCTCCCTCCCGCCCTCCTCTGGATCCACCGGGTCCGGGGACGAGG
GGATCAGGGTAGAGAAGGAGGAGGGCGGTACCTGCGGGCCTGGGAGTGGA
CGACGGCGCGGGTGGCGGCGGCGGGGTAATGTGGGAGGGAGGGAGAGAGA
GGAGAGGTAGAAGAAAGGGAGGGCGTGAAAGGAGAGCAAGAAAGGCGAGG
GGGCAGAAGAGAGGAGGGAGAAAGGGAAGGCCTGGTGGCCCTGGAAATGT
ATTGGCGATGTGAATAAGCGTCTTTGAATGAAAGTAAGTGAGTCAATCAG
AAATCGAGGGTCTCGTACGAAGGGAGCTGGATCCACGGGCGTGACGGAGA
GGGATTTGGTTTCCAGAAAAGAGCAAAGAGAGGGGAAGAAAAGCATTGAC
GCGAGCTCCGTTGGATTTTTCGTCGCGGGAAGCGGCACGACGGGCGGAAG
GGATTAGGGTAAAAGGGTGATCCCGAGAGGATTGTGCTGGATTAGCGGTT
TCTCAAAAGCAATGTAACACGATACGCCCCACTGGCGGCTGGTGGGAGGT
TCCGAAGGGGACAAGGGAGGAAGGAGGGACAGGAAAGTTCAGACGATAAG
CATACCCCACAAGCCAAATCAAGCACTATCAATACACCCCACCCAGCGAA
AGCCTTTATGTGTGCAGCGAACCTATCTGGCACGGAGCCATGCGGCAACC
GCGTTAGTCGTGACATGTCTTTCTTCAGGCACCTCCACCGTCCCTCTCCG
CCTGGACACCATCACAGCTATCGCCGGATAAATGACCATGTTTGACATAA
AATCTCTCAGATGCGACAGGATCAAAAGGCCGTTCCACCACCTCACGCGT
TTCTATCTGTATCGGAAAGGCATTGCACGGGCCGGGCGTGGCGAGCAGAC
AGCCGGAGCTGCCACAAGCAAGCTTACCCTGCCCCCGCCGCGGGCGTCAG
GGCCCAAGCCGAAGCAAGCGACCATCAAGAGTAGGACGCACTTACCCGGA
CATTGACGCCATGGTCCCCACACTCCCCTACCCCTCCTGCCCCAGCCTCT
GTCTCTCCTTCCCTCCCTCTCTCCCTTCCTCTCTTCCTCCCTCCCTCGCC
TAGTCCTCCCCTCACCACAAAGCAAGGACTTGGGCTCTATACCGGCCCAG
CTGCCCGCTCTTCGGTCCACAGGCGGAAAATTTCTCTGACTCTCCAATAA
AAAAAGACACGTACACATACAGACACGCACTATCACTCACACGAACGCTC
CTCTATATACACACCGGCCATGCGCGCGTCGCCCTCTCTGCTTCTACTTC
CACTGCTCATTGTATCATATCTTGAAACATCGACAGCTTCCCTGACGCCG
TGCTCTCACACCCAAAGGATTTAAAACTCAGGCGACAACGCGCACTCCGT
GCCCCTCTCCTCCCAAGGCTGTTATCCTCTCTCCCTTGGCCGCGCTTCAA
CATCCTCTCCCCAGACTCTCCCTCCCTTCCTCCGTCCCTTCCCCCCTCAC
GCGTACAGGGACTCGATCAAGGCCGCATGCTTCTTGGCTACCACGCTCCT
CTTCAGCTTCAGCGTCGGCGTCAGGTCGCCCTCCTTCTCGCTGAAGTCCT
TCTCGAGCAGGGTGTACTTCTGCACGTATTGGGCCCGACTGGTGGCCTGG
CTGTTGGCCGCCTATAGAGGAAGAAGGGA back to topprotein sequence of rna5902 >rna5902-protein ID=rna5902-protein|Name=rna5902|organism=Nannochloropsis gaditana|type=polypeptide|length=121bp
MCTCLFLLESQRNFPPVDRRAGSWAGIEPKSLLCGEGRTRRGREEERKGE
REGRRDRGWGRRGRGVWGPWRQCPGKCVLLLMVACFGLGPDARGGGRVSL
LVAAPAVCSPRPARAMPFRYR back to topmRNA from alignment at CM002467.1:34247..35678- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5902 ID=rna5902|Name=rna5902|organism=Nannochloropsis gaditana|type=mRNA|length=1432bp|location=Sequence derived from alignment at CM002467.1:34247..35678- (Nannochloropsis gaditana)
ATAGGCGGCCAACAGCCAGGCCACCAGTCGGGCCCAATACGTGCAGAAGT
ACACCCTGCTCGAGAAGGACTTCAGCGAGAAGGAGGGCGACCTGACGCCG
ACGCTGAAGCTGAAGAGGAGCGTGGTAGCCAAGAAGCATGCGGCCTTGAT
CGAGTCCCTGTACGCGTGAGGGGGGAAGGGACGGAGGAAGGGAGGGAGAG
TCTGGGGAGAGGATGTTGAAGCGCGGCCAAGGGAGAGAGGATAACAGCCT
TGGGAGGAGAGGGGCACGGAGTGCGCGTTGTCGCCTGAGTTTTAAATCCT
TTGGGTGTGAGAGCACGGCGTCAGGGAAGCTGTCGATGTTTCAAGATATG
ATACAATGAGCAGTGGAAGTAGAAGCAGAGAGGGCGACGCGCGCATGGCC
GGTGTGTATATAGAGGAGCGTTCGTGTGAGTGATAGTGCGTGTCTGTATG
TGTACGTGTCTTTTTTTATTGGAGAGTCAGAGAAATTTTCCGCCTGTGGA
CCGAAGAGCGGGCAGCTGGGCCGGTATAGAGCCCAAGTCCTTGCTTTGTG
GTGAGGGGAGGACTAGGCGAGGGAGGGAGGAAGAGAGGAAGGGAGAGAGG
GAGGGAAGGAGAGACAGAGGCTGGGGCAGGAGGGGTAGGGGAGTGTGGGG
ACCATGGCGTCAATGTCCGGGTAAGTGCGTCCTACTCTTGATGGTCGCTT
GCTTCGGCTTGGGCCCTGACGCCCGCGGCGGGGGCAGGGTAAGCTTGCTT
GTGGCAGCTCCGGCTGTCTGCTCGCCACGCCCGGCCCGTGCAATGCCTTT
CCGATACAGATAGAAACGCGTGAGGTGGTGGAACGGCCTTTTGATCCTGT
CGCATCTGAGAGATTTTATGTCAAACATGGTCATTTATCCGGCGATAGCT
GTGATGGTGTCCAGGCGGAGAGGGACGGTGGAGGTGCCTGAAGAAAGACA
TGTCACGACTAACGCGGTTGCCGCATGGCTCCGTGCCAGATAGGTTCGCT
GCACACATAAAGGCTTTCGCTGGGTGGGGTGTATTGATAGTGCTTGATTT
GGCTTGTGGGGTATGCTTATCGTCTGAACTTTCCTGTCCCTCCTTCCTCC
CTTGTCCCCTTCGGAACCTCCCACCAGCCGCCAGTGGGGCGTATCGTGTT
ACATTGCTTTTGAGAAACCGCTAATCCAGCACAATCCTCTCGGGATCACC
CTTTTACCCTAATCCCTTCCGCCCGTCGTGCCGCTTCCCGCGACGAAAAA
TCCAACGGAGCTCGCGTCAATGCTTTTCTTCCCCTCTCTTTGCTCTTTTC
TGGAAACCAAATCCCTCTCCGTCACGCCCGTGGATCCAGCTCCCTTCGTA
CGAGACCCTCGATTTCTGATTGACTCACTTACTTTCATTCAAAGACGCTT
ATTCACATCGCCAATACATTTCCAGGGCCACC back to topCoding sequence (CDS) from alignment at CM002467.1:34247..35678- >rna5902 ID=rna5902|Name=rna5902|organism=Nannochloropsis gaditana|type=CDS|length=366bp|location=Sequence derived from alignment at CM002467.1:34247..35678- (Nannochloropsis gaditana)
ATGTGTACGTGTCTTTTTTTATTGGAGAGTCAGAGAAATTTTCCGCCTGT
GGACCGAAGAGCGGGCAGCTGGGCCGGTATAGAGCCCAAGTCCTTGCTTT
GTGGTGAGGGGAGGACTAGGCGAGGGAGGGAGGAAGAGAGGAAGGGAGAG
AGGGAGGGAAGGAGAGACAGAGGCTGGGGCAGGAGGGGTAGGGGAGTGTG
GGGACCATGGCGTCAATGTCCGGGTAAGTGCGTCCTACTCTTGATGGTCG
CTTGCTTCGGCTTGGGCCCTGACGCCCGCGGCGGGGGCAGGGTAAGCTTG
CTTGTGGCAGCTCCGGCTGTCTGCTCGCCACGCCCGGCCCGTGCAATGCC
TTTCCGATACAGATAG back to top
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