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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100758g2.9339.mrna |
| Orig protein id | gnl|cribi|Naga_100758g2.9339 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1475137..1476895 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna589 ID=rna589|Name=rna589|organism=Nannochloropsis gaditana|type=mRNA|length=979bp
ACGGGCCGCTGTCCGAAAAGTGACGCGAAGAAAGCGAAGAGGTCGAAAGC
CCATAGCTGACGTAGCACTCCACACTGAAATCGGACCTAAAATGCCCATT
CATGCATTCATTTACCCAACATACGTCAAATTTGAACCGTTTCCTAAGCA
TTGCACAGTTCTAATAAAGGGCTGGATTCTCATACTGGTCGTCCTTGCGC
AGACTCCAGTCCCCAGGTCTCCGAATCGCTTGGAAAGAGTGCAACTGACA
CCAACATCAACCTGTCGGTGCACTCGCCCCCCTTGTTTGCACCACTGACA
ACCTCCAGCAAAAACACCATCATATTTCTTAAAACTGCCATGGCCGAATT
GCCGAAGGGGAGGCACCGGCGACAGGCGCGCATTGTCACGCGTCTGTGCA
GTGTGGCGCTGTTATTCTGCTCCTGGTTTTTCCTTTTCATGGCTTCTACG
ACTGCCTCCTCGGCGTCCTCCTCTGCCACGCATGATGTAATTAGCACAGC
GAGCACCAGTGCTGCTGCTGGCAGGGCTCCATTTGCCCCGGCTGTGGCAG
GCTGGTTCTTCTCGACAACGTCGCGCATGACCAAGCAGGAAAAACGAGGA
CAGGCGGATATGATGCTGCAAGCACACGAAGTGCCGCCAACGGATCGAGC
AGAAAATCCCATCAAAGCCTTAAAAATTATATTCCTGAGCCACGGAAAAG
AGAGCGGGATGGGTGTGGCGCACTTGTTTGCTGTAACCCTTCAGACCGCC
GTCACTCCCATCCTGCGGTCCGTCGGCTATCACTTGCAACGCCTGTACCG
AGCTTTGGTTTGGGCACTTAACGCTGGGGTTGTGGATGGGTCACGGAGAG
TTGGTGCATTACTGGTGCAGGGGCTCGGTTCTCTTGCTTCCTCTCTTTGC
CAGGGTCTCGTGGCTGTTGTTGAGCTGGCAGAGGTGAGGTTTCATGTGGA
AGGTGGCCGCTACTTCATTCTCCCAAAGG back to topprotein sequence of rna589 >rna589-protein ID=rna589-protein|Name=rna589|organism=Nannochloropsis gaditana|type=polypeptide|length=408bp
MSGQAIDGGGMTSTTSYHPLQEQPVHPQHQQPPPHHHPHHPHYPLSHHQQ
CQSAPQTAGSLSTGPGFNFRGPVYPHIMPQHSLYLSASGPQLNGRERDRP
ENGMLYPEYFSPNPSSHPRAHAYNGISASGGMVASSAPVPSASVPARPLA
SPTSTLPGGYCPAPCALPPSSHSYSLQEGGLVKAPLPPSLASGASPPLSP
PPSSTCTNSVADPLQHHAVYQAQYLVKPGHPGGEKGSGRGEGEKEGGRGQ
QHRTTPSSPPPPQQQQQQQQQQQQQQQQQQSQQQQQQQQQQQQQQQQQQQ
QQQQQSQQQQQQQQQHIDEQQQQQSHQHPHSSRTTACASPAIMKERRQKG
WWRNGRWSDQELRYLDVLKQDFEDGTCQIVSFPSYPSLSASPLAWQLLLP
SFLPVPRP back to topmRNA from alignment at CM002455.1:1475137..1476895+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna589 ID=rna589|Name=rna589|organism=Nannochloropsis gaditana|type=mRNA|length=1759bp|location=Sequence derived from alignment at CM002455.1:1475137..1476895+ (Nannochloropsis gaditana)
CTTGTCAGCCGCTTGGTCTGAGGTCTTTGTGAACGTCTTCTCGCGCGCAA
GCCCCCACACCGCGGGACGTCGCATGGTTACATGTGCACGTGCTTTTTGT
TTCTTATGTATGGGGGCCTGAAGGATCTGAGGCTGGGTTTAGTGCCGCAG
GTGTGCTTGTTGTATCCAAAgtgcttttttcttcttcaacttCTCGTTTA
CATGCCCCTTGGGTGGCGAGAAAGGCTGCCAAGCCTGAAACTTGTTTCAC
AGATTCTTTCAAAACACACAGTTGTAAAATAACGGCCTTAGTCTCATGGT
GGCCTTGGTATTTTTCTATTATTCACGTTGTCTTTCGAAGAGATTTTCCT
CAgagccctctctccccttcttcctgttccaAAACTTCAAGCTCGCATCC
AGAAATCCGAGGCCCAGCAGAAACACCGGTCATTTGATGCGCACACGATT
ATACACACATTATCACCAATCCACGACGCTAGTGACACACATATGTCGGG
TCAAGCCATCGACGGTGGTGGAATGACCTCAACAACGTCCTACCATCCTC
TGCAGGAGCAGCCGGTCCATCCACAGCACCAACAGCCAccccctcaccac
cacccccaccacccccactACCCACTCAGTCATCATCAACAATGTCAATC
GGCTCCACAGACAGCAGGGTCGCTCTCAACGGGGCCTGGGTTTAATTTTC
GGGGGCCTGTCTACCCCCATATCATGCCTCAACATTCTCTGTACCTCTCT
GCATCTGGGCCCCAACTCAATGGCAGAGAGCGAGACCGGCCGGAAAACGG
CATGCTCTATCCAGAATATTTCTCGCCCAATCCTTCTTCACATCCCCGCG
CCCATGCCTACAATGGGATCTCGGCCTCGGGGGGTATGGTTGCCTCGTCA
GCTCCTgttccctccgcctctgtgCCTGCCCGGCCATTGGCAAGCCCAAC
TTCCACGTTGCCTGGAGGCTACTGCCCTGCTCCATGtgcgctgcctcctt
cctctcactCCTACTCgctccaggagggaggactggtcaaggcccctctc
ccgccttcacTGGCGTCTGgggcgtccccccccttgtcccccccccctag
cTCGACTTGCACGAATTCTGTGGCTGATCCTTTGCAGCACCATGCCGTGT
ATCAAGCACAGTACCTTGTTAAGCCTGGCCAtcctggaggagaaaaagga
agtgggagaggcgaaggagagaaggaggggggccgggggcaaCAGCACAG
AACGACACCttcgtcaccaccaccaccacagcagcagcagcagcagcagc
agcaacaacaacaacaacaacaacagcaacaatctcaacagcaacaacaa
caacagcaacaacaacagcagcaacaacaacagcaacaacaacagcagca
acaacaatcacaacaacaacaacaacaacaacagcaacataTCGAcgaac
agcaacagcagcagtcaCACCAGCATCCGCACAGCTCGAGGACGACGGCA
TGCGCCAGTCCCGCTATCATGAAAGAACGCCGGCAGAAAGGTTGGTGGCG
CAATGGTCGCTGGTCCGATCAAGAATTAAGGTATCTGGACGTGCTCAAGC
AAGACTTCGAGGACGGTACGTGCCAGAttgtttcctttccctcctacccc
tccctctctgcctctccccttgcttggcagctcttgctcccttccttcct
ccctgtcccccggCCCTGACTGCTCTCTCCTGTCCACGCGAGATTCTCTC
Accgttccc back to topCoding sequence (CDS) from alignment at CM002455.1:1475137..1476895+ >rna589 ID=rna589|Name=rna589|organism=Nannochloropsis gaditana|type=CDS|length=1227bp|location=Sequence derived from alignment at CM002455.1:1475137..1476895+ (Nannochloropsis gaditana)
ATGTCGGGTCAAGCCATCGACGGTGGTGGAATGACCTCAACAACGTCCTA
CCATCCTCTGCAGGAGCAGCCGGTCCATCCACAGCACCAACAGCCAcccc
ctcaccaccacccccaccacccccactACCCACTCAGTCATCATCAACAA
TGTCAATCGGCTCCACAGACAGCAGGGTCGCTCTCAACGGGGCCTGGGTT
TAATTTTCGGGGGCCTGTCTACCCCCATATCATGCCTCAACATTCTCTGT
ACCTCTCTGCATCTGGGCCCCAACTCAATGGCAGAGAGCGAGACCGGCCG
GAAAACGGCATGCTCTATCCAGAATATTTCTCGCCCAATCCTTCTTCACA
TCCCCGCGCCCATGCCTACAATGGGATCTCGGCCTCGGGGGGTATGGTTG
CCTCGTCAGCTCCTgttccctccgcctctgtgCCTGCCCGGCCATTGGCA
AGCCCAACTTCCACGTTGCCTGGAGGCTACTGCCCTGCTCCATGtgcgct
gcctccttcctctcactCCTACTCgctccaggagggaggactggtcaagg
cccctctcccgccttcacTGGCGTCTGgggcgtccccccccttgtccccc
ccccctagcTCGACTTGCACGAATTCTGTGGCTGATCCTTTGCAGCACCA
TGCCGTGTATCAAGCACAGTACCTTGTTAAGCCTGGCCAtcctggaggag
aaaaaggaagtgggagaggcgaaggagagaaggaggggggccgggggcaa
CAGCACAGAACGACACCttcgtcaccaccaccaccacagcagcagcagca
gcagcagcagcaacaacaacaacaacaacaacagcaacaatctcaacagc
aacaacaacaacagcaacaacaacagcagcaacaacaacagcaacaacaa
cagcagcaacaacaatcacaacaacaacaacaacaacaacagcaacataT
CGAcgaacagcaacagcagcagtcaCACCAGCATCCGCACAGCTCGAGGA
CGACGGCATGCGCCAGTCCCGCTATCATGAAAGAACGCCGGCAGAAAGGT
TGGTGGCGCAATGGTCGCTGGTCCGATCAAGAATTAAGGTATCTGGACGT
GCTCAAGCAAGACTTCGAGGACGGTACGTGCCAGAttgtttcctttccct
cctacccctccctctctgcctctccccttgcttggcagctcttgctccct
tccttcctccctgtcccccggCCCTGA back to top
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