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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101192g2.10716.mrna |
| Orig protein id | gnl|cribi|Naga_101192g2.10716 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:993443..994886 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5852 ID=rna5852|Name=rna5852|organism=Nannochloropsis gaditana|type=mRNA|length=1321bp
GCCTTCACGACGCTGGCTCCCTCTTCAAGCCAGTCAAAGTCAGGTGTACA
CGCAACGGATGATGCTTGACGTCCACACAATATAGTGCTGGGCGCTTCGG
TCCCTTGCCGATGGAAGTTCTTGTTGTGTTGGTTAAATTATTGGGATGAA
CCTCTTGCCCTGTAGAGGGTTGGGAGGGAGCTAGCGAGGCACCTGAAGAG
GAACTTCAACAGGGAGAACAGCAACTTAAAGCCCCTGTGTTACCATGGCC
CGGGCTTGCCCTCCACGAGACGTTCGGTAAAGTTCACAGGCACCGTAGCC
GTTTCCTATCCTCCCTCTTCATCGATGCCATTGGTTGTACATAGTGCAAC
AATGACTAGCCTCAACAGAACCAGGAGGCAAGCTTACCACTCTCCTTTCC
TTGCCAGGGCGTATTTTTTTTGCGAGAAATATAAAGCGATGCATTGATGG
CAAGCAGATGATGATGCCACTGAATGATATGAGGCATTACAAGCCACACA
TAATTATTTTGAGGGGGCTTCAGCTTGTCTCTTTACTTCCTCCTCTCTCG
CCCTCCTCTTCTACCTTGCAAATCCCCTTTAGCGCACGCTAAATCCCAAC
ACCATTCGTCGTTGAGCACAAGCCGCAGATTACCACGTCGCCTTTAGCAC
CTTCAACGCAATCCTCATCCCCCTCTGTCCTCCCCACCATCATACGCCTC
CTACTCCGGTTCTACTTCTGCTGGATCCTTTCCTTGCACTGTTTCGTCCT
TCTCCTTCCTCTGAAGCCAGCTCCCTCGACGCATCGCCATGGCGCAGGAG
CAGAACCAAAACCGTCACCGCACACATTCAATCCCTCTAGCCTTCCTTCC
GCTCTGGCGGAGAGCCTCTCACCGGCGTGCCAATGACGGTCTCCGGGGGG
TTCGTTCCACGACATTTTTTCCCTCCCTCTCCTTCCTTCTTCTCTTCGCG
TCCTCCTGCTTGACAGCACACGCCTTCCTCCCTCTTCCCTGCCGGTTTAA
GTTTGCTCTCGCGGCGGTCCCCGGCCACCGACGAGGGCTTTTGAGCGGCG
CTATGAACGATGTGACAGGCGAGATGGCAAGCACGTCGGCGAAGGGAGCC
GTCACCTTAGGCCCTTACAAGAACGGGGCACTCTCCTTCACGTACCCAAA
GCCGACCGTAAGCGACGCCGAGGTAGAGGCGCAGGTGAAGACGGCGGCGA
AGAAGACATGTAGGTATCGGGCAGGGGGAAGGGAGGGAAAGAGAGAGAAG
AGGGAGGAGGAAGAGAGAGAGAGGAGGAGAGAAGAGAGAGGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAG back to topprotein sequence of rna5852 >rna5852-protein ID=rna5852-protein|Name=rna5852|organism=Nannochloropsis gaditana|type=polypeptide|length=321bp
MCQLSQVLHARNDCRAMNLVREVHKRVWQRRRTAAFTGDESHLMLSRRQS
HRQSRVNMSRNCLIGVGGLLFVHWTSLSMSLSSLPGDRYPSIQTSTAFFP
RRYASTGFLYSIRPHQPPLLLGRSQHCRPRAQTRRDDGSSYPFLSRWRRG
PDWSVRLASTDGVQGTGETDFYFSYPASGGERKEEGGGEGGKEGPGEGAK
VPDENARARQRSDSNVVHRQNEAEEEDLAEIVGKAGESVREEARRPGGSP
RAGGKEGRKAAREGGPQGGLGEIEESKSPPVTVVPGPARAPEDDLARLGA
GQEGRSATRRATKRWELERGG back to topmRNA from alignment at CM002466.1:993443..994886+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5852 ID=rna5852|Name=rna5852|organism=Nannochloropsis gaditana|type=mRNA|length=1444bp|location=Sequence derived from alignment at CM002466.1:993443..994886+ (Nannochloropsis gaditana)
GTTGCCAACCTTTCCATGCTAATCGACACTAAAAGAGGGTGAAATGTGTC
AATTGTCACAGGTCCTCCATGCACGGAATGACTGTCGTGCAATGAATTTG
GTAAGAGAGGTTCATAAGCGCGtatggcagaggcggaggactgCGGCGTT
CACAGGTGATGAATCCCATCTGATGCTGTCACGGCGCCAGTCACACCGGC
AAAGCCGCGTAAATATGTCAAGAAATTGTCTCATAGGCGTCGGTGGGCTT
CTCTTTGTCCATTGGGTGAGTGACTTTCCTCACGTTGGTGCGCAACGTGA
GCGGGGCTGGCGCTGAATGTCTCTCTGTTCCCTCCACTAGATTATCCTgt
ctctcttttttcttgAAGACACACAACCAAAGGCCAATTTTGCAAATATC
CCAACGTGAGACACACTTCGCTCGATAATGACTGGATCCTGTGATTCACC
ATGCACCGtcccccgctttctccttctcaccaGACGTCGCTCTCCATGTC
CCTCTCCTCATTGCCCGGGGACCGTTATCCCTCGATACAAACCTCGactg
ccttctttcctcgTCGATACGCCTCTACCGGCTTTCTTTACTCTATCCGG
CCCCATCAACCACCGTTATTGTTGGGTCGTTCACAGCATTGCCGCCCCCG
CGCCCAGACTCGGCGGGACGATGGAAGCTCTTACCCCTTTTTAAGCCGCT
GGCGTCGCGGGCCCGATTGGAGCGTGAGACTGGCGTCGACTGACGGAGTG
CAGGGAACGGGGGAGACGGACTTTTATTTCTCGTACCCTGCCtcaggggg
ggaaagaaaggaggagggaggtggggaaggagggaaggaggggccggggg
agggagcgaaggtgCCAGACGAGAACGCGCGGGCCCGGCAGAGATCAGAT
TCGAACGTCGTCCATCGGCAGaatgaggcggaggaggaggacctggcgGA
GATAgtgggaaaggcgggggagtcggtgcgggaggaggcgcggaggccgg
gggggagcccgagggcgggagggaaggaggggaggaaggccgcgagggag
ggcgggccgcAGGGAGGGCTTGGCGAGATTGAGGAGTCGAAGGTGAGTGC
AtggaggagagtgggaggccGTTGGGTTTTTTTTGTTCCATGACTCGGGA
TtttcgcctcctttctccatgTTGCTCTTTCTGACCTCTCGCCGCTCTCG
CAGAGCCCTCCGGTGACGGTAGTTCCCGGCCCCGCTCGCGCCCCTGAGGA
TGATTTAGCCAGACTAGGAGCAGGacaagagggaaggagtgcgacgagga
gggcgacaaagcGCTGGGagctggagagggggggatgagacgggggggga
tgaggaggagcccCTGATCAAcagggtggtggggggcatGCTGAACGGCC
TGGACTTGTCTGCCGGGGCCTACACGCTCTCGAcgcccggggag back to topCoding sequence (CDS) from alignment at CM002466.1:993443..994886+ >rna5852 ID=rna5852|Name=rna5852|organism=Nannochloropsis gaditana|type=CDS|length=2898bp|location=Sequence derived from alignment at CM002466.1:993443..994886+ (Nannochloropsis gaditana)
ATGTGTCAATTGTCACAGGTCCTCCATGCACGGAATGACTGTCGTGCAAT
GAATTTGGTAAGAGAGGTTCATAAGCGCGtatggcagaggcggaggactg
CGGCGTTCACAGGTGATGAATCCCATCTGATGCTGTCACGGCGCCAGTCA
CACCGGCAAAGCCGCGTAAATATGTCAAGAAATTGTCTCATAGGCGTCGG
TGGGCTTCTCTTTGTCCATTGGACGTCGCTCTCCATGTCCCTCTCCTCAT
TGCCCGGGGACCGTTATCCCTCGATACAAACCTCGactgccttctttcct
cgTCGATACGCCTCTACCGGCTTTCTTTACTCTATCCGGCCCCATCAACC
ACCGTTATTGTTGGGTCGTTCACAGCATTGCCGCCCCCGCGCCCAGACTC
GGCGGGACGATGGAAGCTCTTACCCCTTTTTAAGCCGCTGGCGTCGCGGG
CCCGATTGGAGCGTGAGACTGGCGTCGACTGACGGAGTGCAGGGAACGGG
GGAGACGGACTTTTATTTCTCGTACCCTGCCtcagggggggaaagaaagg
aggagggaggtggggaaggagggaaggaggggccgggggagggagcgaag
gtgCCAGACGAGAACGCGCGGGCCCGGCAGAGATCAGATTCGAACGTCGT
CCATCGGCAGaatgaggcggaggaggaggacctggcgGAGATAgtgggaa
aggcgggggagtcggtgcgggaggaggcgcggaggccgggggggagcccg
agggcgggagggaaggaggggaggaaggccgcgagggagggcgggccgcA
GGGAGGGCTTGGCGAGATTGAGGAGTCGAAGAGCCCTCCGGTGACGGTAG
TTCCCGGCCCCGCTCGCGCCCCTGAGGATGATTTAGCCAGACTAGGAGCA
GGacaagagggaaggagtgcgacgaggagggcgacaaagcGCTGGGagct
ggagagggggggatgaATGTGTCAATTGTCACAGGTCCTCCATGCACGGA
ATGACTGTCGTGCAATGAATTTGGTAAGAGAGGTTCATAAGCGCGtatgg
cagaggcggaggactgCGGCGTTCACAGGTGATGAATCCCATCTGATGCT
GTCACGGCGCCAGTCACACCGGCAAAGCCGCGTAAATATGTCAAGAAATT
GTCTCATAGGCGTCGGTGGGCTTCTCTTTGTCCATTGGACGTCGCTCTCC
ATGTCCCTCTCCTCATTGCCCGGGGACCGTTATCCCTCGATACAAACCTC
GactgccttctttcctcgTCGATACGCCTCTACCGGCTTTCTTTACTCTA
TCCGGCCCCATCAACCACCGTTATTGTTGGGTCGTTCACAGCATTGCCGC
CCCCGCGCCCAGACTCGGCGGGACGATGGAAGCTCTTACCCCTTTTTAAG
CCGCTGGCGTCGCGGGCCCGATTGGAGCGTGAGACTGGCGTCGACTGACG
GAGTGCAGGGAACGGGGGAGACGGACTTTTATTTCTCGTACCCTGCCtca
gggggggaaagaaaggaggagggaggtggggaaggagggaaggaggggcc
gggggagggagcgaaggtgCCAGACGAGAACGCGCGGGCCCGGCAGAGAT
CAGATTCGAACGTCGTCCATCGGCAGaatgaggcggaggaggaggacctg
gcgGAGATAgtgggaaaggcgggggagtcggtgcgggaggaggcgcggag
gccgggggggagcccgagggcgggagggaaggaggggaggaaggccgcga
gggagggcgggccgcAGGGAGGGCTTGGCGAGATTGAGGAGTCGAAGAGC
CCTCCGGTGACGGTAGTTCCCGGCCCCGCTCGCGCCCCTGAGGATGATTT
AGCCAGACTAGGAGCAGGacaagagggaaggagtgcgacgaggagggcga
caaagcGCTGGGagctggagagggggggatgaATGTGTCAATTGTCACAG
GTCCTCCATGCACGGAATGACTGTCGTGCAATGAATTTGGTAAGAGAGGT
TCATAAGCGCGtatggcagaggcggaggactgCGGCGTTCACAGGTGATG
AATCCCATCTGATGCTGTCACGGCGCCAGTCACACCGGCAAAGCCGCGTA
AATATGTCAAGAAATTGTCTCATAGGCGTCGGTGGGCTTCTCTTTGTCCA
TTGGACGTCGCTCTCCATGTCCCTCTCCTCATTGCCCGGGGACCGTTATC
CCTCGATACAAACCTCGactgccttctttcctcgTCGATACGCCTCTACC
GGCTTTCTTTACTCTATCCGGCCCCATCAACCACCGTTATTGTTGGGTCG
TTCACAGCATTGCCGCCCCCGCGCCCAGACTCGGCGGGACGATGGAAGCT
CTTACCCCTTTTTAAGCCGCTGGCGTCGCGGGCCCGATTGGAGCGTGAGA
CTGGCGTCGACTGACGGAGTGCAGGGAACGGGGGAGACGGACTTTTATTT
CTCGTACCCTGCCtcagggggggaaagaaaggaggagggaggtggggaag
gagggaaggaggggccgggggagggagcgaaggtgCCAGACGAGAACGCG
CGGGCCCGGCAGAGATCAGATTCGAACGTCGTCCATCGGCAGaatgaggc
ggaggaggaggacctggcgGAGATAgtgggaaaggcgggggagtcggtgc
gggaggaggcgcggaggccgggggggagcccgagggcgggagggaaggag
gggaggaaggccgcgagggagggcgggccgcAGGGAGGGCTTGGCGAGAT
TGAGGAGTCGAAGAGCCCTCCGGTGACGGTAGTTCCCGGCCCCGCTCGCG
CCCCTGAGGATGATTTAGCCAGACTAGGAGCAGGacaagagggaaggagt
gcgacgaggagggcgacaaagcGCTGGGagctggagagggggggatga back to top
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