|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100887g1.5890.mrna |
| Orig protein id | gnl|cribi|Naga_100887g1.5890 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:987224..987538 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5848 ID=rna5848|Name=rna5848|organism=Nannochloropsis gaditana|type=mRNA|length=1598bp
TAGCAGAGATATAGACTTGACTCTCGGCGAGTACCTCTCATCGCTTAGCC
TCTCCGTCCACGAGTACTTAATTACACGGGCCCAAGCTCATGCTCCGCCC
CGAGTGCAGCAACGCAAGGAGTCGAAAGGCACACTTTTCTCTGGATATTT
GGCCCCCAATGCCGTTATTTGGTGTGCAGTAGCTGAGGTCTCTAACACTC
TCACACAACGATGGTGCTTTCACAATTTAGAAGGGACAAACAACCGATTT
TTAACTCTGATGCAACGTACGCGCCGGAGCTGACCAGTCATGCCTTCCAA
ATTATCAAATTCTCTTGGATGCCTGAAAATCGTGGCTTTCACAGGGATCA
ATGCAGATCAAGTGGGTGCGTGCACTCTAGTCGAAAGTCCTCGTGTCAAG
TGAGCTGCTCCATGACAAACCCCAACTTCTTAGACTTGAGACCTCCATCG
ACATTGATCAAGTGAATTGTGACAGATTTTGTTGTGTTTAGAAAAAGATG
ATCAAAAAGATGACCGCCGAAACACAAGGTACTCAGCTGAGAATTTGATA
CAAATTAAATTGATACGAGGAAAGTGAGGGGCTCTTTCACTTACACATGA
ATAAAAATACTGGCTCCACCACCATTGCTCCTGCCATTTCTCGCACAGCG
GACACAGCTGCGCTATGTAAATGGTCAATGGCCCGCCATGGCTACTTGCA
CTCAGTCGCCCACGTCCTTCCGTCCGATACAATCCCGCTCCTGGCTTCCC
TGGCAGAGGCCAGCGCTGGTCCCTCGGGGTACTCCTCCTTTCGCGCCAGC
CCTTTGCTTCATTGGTGCTACGCCACCCGCGCCTCGGCTGTGCTCAGGGC
GGTTCAGACTTTCTTGGAGGACAAGGAGGGCGACGCGAACAGGCGGTTGG
ACAAGGGTGGGAGGCTTCGGGAGCGCCTGGTGGTGGTGTTGGGAGGAGGG
ATGGACGGGTTGGTCTTGGCCCTGTGCGCGAGAGCTGCCGAAGCGACGGG
GGTGGGGGTGAAGGTGGTGGAGTTGGATGCACCTGAGGTGGTGGCGCGCA
AGGAAGGGGTTCTGGGGGCGTGGAGGGAGGGGGGGAGGGAGGGCGCGGTC
AGGGAGTTTTTGCGTCAGACGGGCAGCTACCGCCTGGAAGCGGTGGATTT
GCGGGAGGGGGGCCGCGTGGGCGAGGTCGTGGGGGAGGTCGTGAGGGAGG
GAGGGGGGGCGGGGAGGGAAGGAGAGGCACCACCCGACGGAGATGGAAGC
AAGGGAGGAGGGCAAGGCGAGGTAGAGCCTCAAGTCTTGTTCATCCTGGA
GGCGGTGCTGGGCTACATGAGGTTGCAAGAGGTCAAGATCTTGTTAAGTA
CCCTCCCCATGGTGGCGCCCTCCTCTTCCCTCCTCATCATCGACACGGGC
AGGACCTCCGCCCTTAAGAACGACGACGCCGTCGCTGCTGCCGTTGATGC
TGCTTTTGAGGCGAGAGGGTGCTCCCTGACCGGGCTGGCGGGATGGAAAG
ACAGGTTGGAAGGGCGGAGGGAGGGGGGGAGGGGCGGGGGAAGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGCAAGAAGGACGAAGGTCTGACGAA back to topprotein sequence of rna5848 >rna5848-protein ID=rna5848-protein|Name=rna5848|organism=Nannochloropsis gaditana|type=polypeptide|length=104bp
MLNYVEELARLMHVNEKGRKASGGEHGDEKDEEGAPMEGGREPNEGNLEG
PTGVGLSALRATTLGEEALPGALSLYVKRAGWVVEKETAYGKEGEVLYHL
CKQL back to topmRNA from alignment at CM002466.1:987224..987538+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5848 ID=rna5848|Name=rna5848|organism=Nannochloropsis gaditana|type=mRNA|length=315bp|location=Sequence derived from alignment at CM002466.1:987224..987538+ (Nannochloropsis gaditana)
ATGCTCAATTATGTGGAGGAACTTGCCAGGCTCATGCACGTCaacgaaaa
aggaaggaaagcgtcaggaggagagcacggtgacgagaaggacgaagaag
gggcgCCCATGGAGGGTGGCAGGGAGCCGAATGAAGGCAATTTAGAGGGG
CCGACAGGCGTGGGGTTGAGTGCTTTGAGAGCCACGACcctgggggaaga
ggcattACCCGGCGCCTTGAGTCTCTATGTAAAGCGGGCGGGGTGGGTAG
TGGAGAAGGAAACTGCGtacggcaaggagggagaagttcTGTACCATCTT
TGTAAACAGCTTTGA back to topCoding sequence (CDS) from alignment at CM002466.1:987224..987538+ >rna5848 ID=rna5848|Name=rna5848|organism=Nannochloropsis gaditana|type=CDS|length=315bp|location=Sequence derived from alignment at CM002466.1:987224..987538+ (Nannochloropsis gaditana)
ATGCTCAATTATGTGGAGGAACTTGCCAGGCTCATGCACGTCaacgaaaa
aggaaggaaagcgtcaggaggagagcacggtgacgagaaggacgaagaag
gggcgCCCATGGAGGGTGGCAGGGAGCCGAATGAAGGCAATTTAGAGGGG
CCGACAGGCGTGGGGTTGAGTGCTTTGAGAGCCACGACcctgggggaaga
ggcattACCCGGCGCCTTGAGTCTCTATGTAAAGCGGGCGGGGTGGGTAG
TGGAGAAGGAAACTGCGtacggcaaggagggagaagttcTGTACCATCTT
TGTAAACAGCTTTGA back to top
|