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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101806g2.9589.mrna |
| Orig protein id | gnl|cribi|Naga_101806g2.9589 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:953253..954152 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5832 ID=rna5832|Name=rna5832|organism=Nannochloropsis gaditana|type=mRNA|length=651bp
TCGACCCATTGATTCTTTTACACACAGGAAATCGAGGCAATTACTGTTGG
ATTCATCCCTTGGATCTCTTTGGGGTCGGCGTCGGAGGGCGGCGTTATGG
ACGATGTGGAACAAGGGATAAGGGAAAGGAGGAGCGCGGCTATGGCTTAC
AACGTTGGGAGACTGGTGGAAATAAAAGCGAAACACGCTGGTATTTATGA
AGCACGGGAATCAGGGCTCGATCCGGGCTTTGGAGGCACCGTCATACCTC
ACACATGGGACGTCATTCAACGACACAGGCTTTCCAGGCGCTCCCCTTTT
CCTCTGCGTCGTCCTCCTCCTCCTCCACCCTTCCCTCATCACACCATTCC
ACGCCCCTCGGCGTCACCGCGCTCCATCATCCAGTTCCGGCCCCCGTTTC
CCTGTGCATCCCCGGGCCGTCCTCTCCTCCTTCTCCTCCGCCCGCTACCT
TTCTCATCCCTTGTGCTCTGTCACTGACCAAGCCAGCAGCAGCAGCAGTA
GCAGCAGCAACAGCAACCGCGTGCAAAGAAGTGAACTTGAGAACTTGACT
GTATACGAGCTTAGGAATGCCTGTAGGGAAAGGGGCCTTGCTGTTGCTAC
CAGGGCGAGGAGGAATGAAATGATCGACATGCTCGGGGGTCAGGTAGGGA
G back to topprotein sequence of rna5832 >rna5832-protein ID=rna5832-protein|Name=rna5832|organism=Nannochloropsis gaditana|type=polypeptide|length=71bp
MLATIRTSYARHKYPRADKEEQDGRVQFQEDPARAVGRGFCGHCLDAHAA
EDTHCRPSWLQDLTHSGVLHA back to topmRNA from alignment at CM002466.1:953253..954152+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5832 ID=rna5832|Name=rna5832|organism=Nannochloropsis gaditana|type=mRNA|length=900bp|location=Sequence derived from alignment at CM002466.1:953253..954152+ (Nannochloropsis gaditana)
ATGCTTGCGACAATCCGGACGAGCTACGCGAGACACAAATACCCGCGAGC
GGATAAAGAAGGTTTGGACACGTCCCTAGCATCTCGTTTGGTTTTTGTGT
GAAGTTGAATGTGACATGGCCTTCGGCCAATGCGCTCGCGTCGCGCGTCG
CTTCCAGTGGCTTCGCGAGGCCAAGAGCTTTTGCCCACATTTGGGCCATT
TGCAATGTCGCGGCCCTTTGTTCCCACGCGTTTTGTGCCTGATCACGGCA
TGTTCTAACACATCGGTGGGATCCGTGGTATTTGGACGGTAACGCGGCGT
CGTAGCGGTCCCAATGTGGGGCCATAGCTGGCAAGCAGCACGTTCAAAGC
CCTTTTGTTGGATACTGGCACTTTCCTCATTTTGGCGGCTCCCGAGTCCA
TATACTTATCTTTCTTGCTTCATGATACCCCTTCAGAGCAGGATGGTCGT
GTACAATTTCAAGAAGATCCAGCCCGTGCCGTCGGCAGGGGATTTTGTGG
ACATTGTCTTGACGCGCACGCAGCGGAAGACACCCACTGTCGTCCATCCT
GGTTACAAGATCTCACGCATTCggtgagaaggggagggcggcgtaAAGCA
TAAGGAGTAACAATGATGGCATGATAGCATAGGTGCATTTTTAAAATATG
TGTGCAATGGAGTGGGTGCAATAACCGCAGACATGCGCGGTGCAATGGTC
CATTTGTTTCCCGTATGCTCCAAATCGAGAGGGACTGGACCCTCATCACC
GACCCTGTATTCTACTTACTTTTCatacttcctctctcccatgCCCATGT
CTCAGGGCGTTTTACATGCGTAAGGTCAAATTTACCCAGCAAACTTACTC
GGAGCGGCTACGGCAAATCTTGGCAGATTTCCCCCGGGTGGAGGTATGCT
back to topCoding sequence (CDS) from alignment at CM002466.1:953253..954152+ >rna5832 ID=rna5832|Name=rna5832|organism=Nannochloropsis gaditana|type=CDS|length=648bp|location=Sequence derived from alignment at CM002466.1:953253..954152+ (Nannochloropsis gaditana)
ATGCTTGCGACAATCCGGACGAGCTACGCGAGACACAAATACCCGCGAGC
GGATAAAGAAGAGCAGGATGGTCGTGTACAATTTCAAGAAGATCCAGCCC
GTGCCGTCGGCAGGGGATTTTGTGGACATTGTCTTGACGCGCACGCAGCG
GAAGACACCCACTGTCGTCCATCCTGGTTACAAGATCTCACGCATTCgGG
CGTTTTACATGCGTAAATGCTTGCGACAATCCGGACGAGCTACGCGAGAC
ACAAATACCCGCGAGCGGATAAAGAAGAGCAGGATGGTCGTGTACAATTT
CAAGAAGATCCAGCCCGTGCCGTCGGCAGGGGATTTTGTGGACATTGTCT
TGACGCGCACGCAGCGGAAGACACCCACTGTCGTCCATCCTGGTTACAAG
ATCTCACGCATTCgGGCGTTTTACATGCGTAAATGCTTGCGACAATCCGG
ACGAGCTACGCGAGACACAAATACCCGCGAGCGGATAAAGAAGAGCAGGA
TGGTCGTGTACAATTTCAAGAAGATCCAGCCCGTGCCGTCGGCAGGGGAT
TTTGTGGACATTGTCTTGACGCGCACGCAGCGGAAGACACCCACTGTCGT
CCATCCTGGTTACAAGATCTCACGCATTCgGGCGTTTTACATGCGTAA back to top
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