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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100706g2.1197.mrna |
| Orig protein id | gnl|cribi|Naga_100706g2.1197 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:935365..936500 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5823 ID=rna5823|Name=rna5823|organism=Nannochloropsis gaditana|type=mRNA|length=1787bp
ATGCACTTCAAAAGCCACGGAGGCACATTTTGTCCAGTGGGCCGACGGGT
CTCCACCTGCTACGTCTTGAGCGGCGCCGTGGTTCCGATTTGGCCGGCGA
TCCAGGACGTGGTGATCGATCGAAACAACAAAGACATCCAGGTCGTCCGC
TGCGTGACGCGTGGCGAGCGTTTGGTGGGGTTGAGCATCAAACAAGGGCA
GGAGAAGGAACTGATCGAGAGCTTGAAAGACTTCATCCACTCCGTGAACC
CGGACGGGGGCGACGACCACGATCTGCAGCAGCTGGCGGCAGCGGCGGAG
AAGGACGACCACGAAGCCGATTTTCCTTTTGAAGGACCGCAGGAGTCCCA
GGGCGCCCGAAGCGGTGGAGCAGGACAGGGGCATGAGAAAGGTGGAGGCA
TCGGGGCAATCCCTTCCCAGGCCGTGGCTCCTGGCCGCAACTGGAATTCG
GACGCATTCAAAAACTTGAGCGTCGTGCGAGGGAAACTTCGAAAATCTTT
GGAAAAGGAGAAGAATAGCGAAATCGATGGCGGTGGGAGGCATGATGGAC
AGCACGATGTGGTCGCCGCGAAGGAGGCAGCTGCACGTAGGTACAGGGAA
ACCAAAGACATCGAGAATGGAGACGCCTTCCAGCTTCGGTTGCGCCAGAT
GAAAGCGTATGGCGAGATTGATGCCCTGAGAGGGACGCTGAGGAAGAGCA
AGCCACCAGATCCTTCTTTTGGTACCGTTTTAGACAACAAGCTATGGGCA
GACTATATGTTAAGCTTCCAATCTCATTCGCTCGAGTCCCGAAACCTCGC
GGCAGATAAAGGGACGCCCGGCCAACATACCAATACGCTACCATCCGCCA
CGATCTCTTCCTGTCCTAAAAAGCCTCTGAACGACAGTCTCACCGGTACC
AATACGAGGGGGACCGTGGCAGCTGTGCCCTGGCATTCAAATTTCACAGG
GTCCAACGCGGAAACGGCGGCTTTGTCTTGCCAAGCCCGGCAGATCTCTG
AAGAAGGCCTTCGATGTCCAAGTCATTCCCGCATGGAATCTACAGCTCAA
GCAGTTTGTCCCCTCTTGGATACCACCTCCATAAGCAGAAGTAGTGGGAA
TACCCCTGTACATCATTCGACCCAGGACCATACCAATGACGCTGTCACCA
CCCCCGACGCCAGGAACAGCGACCACTTGCCTAGTAGCACCCTTCCACAC
ACCGACATGGCACCTCCGTCGCCGTCCTCCCTCCAAGCCACGTCTGCAGG
ACTAACGAGGCGATGGCAACGCTCAATTACGCAATATTTTGCAATGAGCA
ACAGCAAGAAACCAATGGCGAGGGCATCGATGCCCGAGATCGTAGAAGGT
GTCGCCCAGCGCCCCTCTTCAGCTTCCACAGTATTCATAGCAGACCCTGA
ATGTGAAATTATTGACCTGACATAACTGCAGACATTAAGAGGTGCTTTCA
AATGTTCAAGGAGAATTATCTGCTTCTCGTTCGTTCGCTGTCCGTGTCCG
AACGACTGATCCGGTACTACCGCCGGCTGTTACATATCTTTTCAAATGAG
AAGCTATATTATCTTTATGAATAAGAAAGGTAGTGAGCGCTTTATTCGTC
TTCCATCTGAACAGTAGGTTGATCAAGAGGCGAAAGCCACGGGAGATGAA
TGACCTCGATTGGAGCGCAAGATCGATACACTACCAATAATCAAAGAGAA
CCGTAGTCAAGAAAAGCTATCGTGATGTGCATAATTGCCAAAGTAATCGC
GAAAACAAACAAATGGATGCGAGTAGCTGTATTGACT back to topprotein sequence of rna5823 >rna5823-protein ID=rna5823-protein|Name=rna5823|organism=Nannochloropsis gaditana|type=polypeptide|length=295bp
GTGGFSFGTDSRTSTTETDSAPSGNIGGFSFVSAHAPALPNGSGTTKAPA
RPSMFGNASQSLHAPASVFGPSTSSTFLGSSLHTPPSPPGPTTCSSVPAL
LVRPPGPHRSNSDSDEGCGQVTDTTGPLDMASTPHSVGTPLSLASPLAIN
GPAPSSMGVTPTTSRIAASPFKVAEASGASTGRGLWTGGSFENFKPATAS
SVFPFFPTQSPRASPPPAKHLEKEEKKSPVIENGKDSVETLSSNASTSPS
SSTCPAAPSSSFTSSPGAVEPSMSVKDLVASLDGSMNRHRTDLDG back to topmRNA from alignment at CM002466.1:935365..936500- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5823 ID=rna5823|Name=rna5823|organism=Nannochloropsis gaditana|type=mRNA|length=1136bp|location=Sequence derived from alignment at CM002466.1:935365..936500- (Nannochloropsis gaditana)
GGTACGGGGGGGTTCAGCTTTGGGACGGACAGTAGGACGAGCACCACCGA
GACCGATAGTGCTCCAAGTGGAAATATCGGTGGGTTTTCATTTGTAAGCG
CTCACGCTCCTGCTTTGCCGAATGGCAGCGGCACCACTAAAGCGCCCGCT
CGCCCGTCAATGTTCGGCAATGCATCGCAATCCTTGCATGCTCCAGCCTC
GGTGTTCGGTCCCTCCACGTCGTCGACCTTCTTGGGATCTTCCCTGCACA
CCCCTCCCTCCCCGCCCGGCCCCACGACATGTTCCTCGGTGCCGGCCTTG
CTGGTACGCCCGCCGGGTCCACACCGCAGCAACAGCGACAGTGACGAGGG
ATGCGGGCAGGTCACGGACACAACGGGCCCGCTCGATATGGCTTCCACGC
CCCATTCGGTGGGAACGCCGCTCTCTTTAGCCTCCCCTTTGGCCATCAAT
GGCCCTGCTCCAAGCTCCATGGGCGTGACTCCTACAACCTCTCGCATCGC
CGCGTCGCCGTTTAAAGTTGCGGAGGCTTCTGGCGCTTCAACGGGCAGAG
GATTGTGGACAGGCGGGTCTTTCGAAAACTTCAAGCCTGCGACTGCATCC
TCTGTTTTCCCTTTCTTCCCCACCCAGTCACCTCGCGCTTCCCCCCCTCC
CGCCAAGCACCTAGAGAAGGAAGAGAAAAAGAGCCCTGTCATTGAAAATG
GAAAGGATAGCGTCGAGACTCTAAGCTCGAATGCATCGACGTCTCCTTCT
TCTTCAACTTGTCCTGCAGCTCCCTCATCCTCCTTCACTTCCTCACCCGG
TGCGGTGGAACCTAGCATGAGCGTGAAGGACCTGGTAGCGTCCCTGGACG
GAAGTATGAATCGGCACAGAACGGACTTAGATGGGTAAAAGCACGGGAAA
TTTGGTTTGCCGTGCATTTTCAGGCATCGAAGTACTTTGTATTTTGTAAG
TGAGTACAAAACAAAAAAAGTAAGACTACGTGTTGAGGAGGGGAAAAAGG
GATAAAAGAAGTTTTAAAACCTTCCTGAAGGGTGAGCTCCTCAAAGCACA
AGAAATGACTTGCATATTATTCAGAGGCAACGATCCCTCGGAAAGACTAT
CCATTGGCAGCAAAGTCAATACAGCTACTCGCATCC back to topCoding sequence (CDS) from alignment at CM002466.1:935365..936500- >rna5823 ID=rna5823|Name=rna5823|organism=Nannochloropsis gaditana|type=CDS|length=888bp|location=Sequence derived from alignment at CM002466.1:935365..936500- (Nannochloropsis gaditana)
GGTACGGGGGGGTTCAGCTTTGGGACGGACAGTAGGACGAGCACCACCGA
GACCGATAGTGCTCCAAGTGGAAATATCGGTGGGTTTTCATTTGTAAGCG
CTCACGCTCCTGCTTTGCCGAATGGCAGCGGCACCACTAAAGCGCCCGCT
CGCCCGTCAATGTTCGGCAATGCATCGCAATCCTTGCATGCTCCAGCCTC
GGTGTTCGGTCCCTCCACGTCGTCGACCTTCTTGGGATCTTCCCTGCACA
CCCCTCCCTCCCCGCCCGGCCCCACGACATGTTCCTCGGTGCCGGCCTTG
CTGGTACGCCCGCCGGGTCCACACCGCAGCAACAGCGACAGTGACGAGGG
ATGCGGGCAGGTCACGGACACAACGGGCCCGCTCGATATGGCTTCCACGC
CCCATTCGGTGGGAACGCCGCTCTCTTTAGCCTCCCCTTTGGCCATCAAT
GGCCCTGCTCCAAGCTCCATGGGCGTGACTCCTACAACCTCTCGCATCGC
CGCGTCGCCGTTTAAAGTTGCGGAGGCTTCTGGCGCTTCAACGGGCAGAG
GATTGTGGACAGGCGGGTCTTTCGAAAACTTCAAGCCTGCGACTGCATCC
TCTGTTTTCCCTTTCTTCCCCACCCAGTCACCTCGCGCTTCCCCCCCTCC
CGCCAAGCACCTAGAGAAGGAAGAGAAAAAGAGCCCTGTCATTGAAAATG
GAAAGGATAGCGTCGAGACTCTAAGCTCGAATGCATCGACGTCTCCTTCT
TCTTCAACTTGTCCTGCAGCTCCCTCATCCTCCTTCACTTCCTCACCCGG
TGCGGTGGAACCTAGCATGAGCGTGAAGGACCTGGTAGCGTCCCTGGACG
GAAGTATGAATCGGCACAGAACGGACTTAGATGGGTAA back to top
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