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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100193g8.5882.mrna |
Orig protein id | gnl|cribi|Naga_100193g8.5882 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002455.1 | supercontig | CM002455.1:1450537..1453424 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna582 ID=rna582|Name=rna582|organism=Nannochloropsis gaditana|type=mRNA|length=2520bp AACCGTACTTTCTCCAGCTACGTCGAGGTATGCTATCACGACTGTTTAGA GCAGTCTTCCTCAGGCCAAGGAGCATCCTGGCGCAGAAGTCCCGCGATAC GATACGCGGGAAGGACGTCTATCACTTGGGACCGCGGTCACTCCTTCACT CCCAGGGCGGAAACGAAACGTACAATGCTGTGCGTGTCAATCAAACGAAA ATACCGAATGAGGACGACTGCAGCGTTCTATCAAGATGGAAATGGATGAA CTCTGGAAAAAAAACCATGAAAGACAGACAAGTTATGTGCCTCCGCCCAA ATTGTTCCTTGCAGTCAAATTCATCCAACGTCTCAGAACATTTCCAACGC CCCCCGCCCGCCCAAACCCAGCCATGCCTATCCCCACCATGTCCAGGACA GGATGCGTCGTGCGAGTGACTGGCGGCAAGCACATGCAACACATGATGTG AATGGATAATGGACATCGGTTCCCTGTGCCTTTGTGACGGCCTGGGCGGC CCGTGGAGATCACTTTCGCTCCTCCGACCCCCCCTACCCATACTACCGCC ACGCACGCAGGCGTTCCTGTTACCTTCGCACTGGTCACATGCACCCAACC CACGTCACCATCCACGGCTTAGGTTCCCTTTCTCACATGTGACTACGGCA CAGGTTCTTTTTCCAGGCATAATGTGTCCGGGACCTCAAGATGGGAAGGG CACTGGCCTGGTAGAGAATCCCTTGGTGGCAGCAGCTGCGGGCTTGTATG CGGAAACCGAGCAGCCAGACAAGGACGAAGGAGTATGGGATTTTTTCCGT TCGTACACTGACGAGCCCCATAAGTCACGGCGTGAGGCCATCTTGAAAGC CCATCCTGAGATCCGGAAGCTCTTCGGGCATTGTCCGTGGACAAAGTACA AGGCGGCCGCGATCATTTCCACGCAGGTCATGGCCGCCGTGGTCCTTCGC CACGCCCCCTTTCCCCTCCTCCTTTTTCTCACCTACACCCTCTCGGGCTC CTGCAACCATTTCTTGACCTTGATCATGCACGAGGTCGCGCATAATTTGG CATTCAAGCGTCTTTTTGCCAATCGGGTCTTCTCCATCATTGTCAACCTG CCTTTGGGGATACCAGCAGCCATCTCCTTTAAGCGCTACCACATGGAGCA TCACAAGTATCAAGGCGATGAGACAGTGGACGTGGATCTCCCCACGGATG TTGAAGGCAAACTCTTCCGCGGAGGACCTCTCAAGCTCCTCTTTGTTTTC CTCATGCCTGCCTTCTACTCACTCCGTCCCCTCTTCGTCCGCCCAAAGAA GCCCAGCAACTGGGAATTGGTGAACGTGCTTGCGCAGCTGACCTTTGATG CCCTGATTTTTTATATCCTGGGCTGGAAGTCACTTTTCTATCTTGTTGTC GGCACTCTTCTAGGTAACAATCATTTCGATCCTTTCCTCGTCCCGTTTCA AACTGATTTAGTTTTCCTTCCTCCCTCATGTTCCCGTCCTGACTTGCGTT CACTGTTCCCGGTTCCCGACGACACCGACATGGCTGTCGCTTTTCTCCGC GCTTGACCCGCATGTCATGCCCCATCTTTTTCGCACCCGCTTCAGGCATG GGGGTGCACCCCATGGCGGGGCATTTCATCGCCGAACACTTCGTTTACCA AGCCGGGCAGGAGACGTACTCGTACTATGGCCCTTTGAACTGGCTCTCCT TGAACGTGGGCTATCACAACGAACACCACGATTTCCCCAATATCCCCGGC ACCCGTCTCCACCAAGTCCGTCGTCTGGCTCCTGAGTTCTACATGCCGCT ACCGCACTACTACTCATGGAGCAAGGTCATATGGGATTTTGTCACAGACC CCGCTGTGACCCCTTTCAACCGTGTGAAACGGAACAATCTTTCAGAGGCT GACAGAATGGCATTGGCAGCTCGGGATTAAGCTGGTGCAACGCAAATTTT GAATTAAAGGGTAGATACAATGCAAGGAGAAATGACACGCACACTAGATC CGACCTACTTCTATATTGCCTTTCGGTATTGGAAAAGTGGCACTTATATG CCGGTTATAAAGCAACATGAACCATATAGAGAAAGGCTGCGCGAATGAAT TGTTTGGGTTACCAACACCTAAAGTCTGCTCTCCTGTTTCTCTGGTCGCT TTCTGTGGCTAACAAGCCCTCACTAGATTGTGTCCCTCTTCTGATGTATT TTCATCATCCCATCTGTTAAGTCGCGAGTCACGCCGAAGGCTTCTTCGTC GCATGAGACGTTTTCCTAATAAGTACCACCTTCTATTTCACACGATGAAC ATGTGGACATCTATATCCACCACTTCGTTCGCCGAAGGCTGACGGTCTCT GAGAGTGTTAACAAAATCTAGCACCAGACTGATGAAGTAGAATAATGGGT AGAGACATCAAAATGAGGGTTGAAAGAAAAGAGGAATTCGCTGTGGATTT GATAATGGTCGTGGTATGGCAGGCAATGGGAAAAAAATTATATATAAAGA TAGAATAAGGCACCATTTGA back to topprotein sequence of rna582 >rna582-protein ID=rna582-protein|Name=rna582|organism=Nannochloropsis gaditana|type=polypeptide|length=750bp MSGPESSAAIEPLRQLGIMPALIAGWSAFPAFMLLLTSQLNHLYTQFAPF LLSIEMEPQNLSSFLIITFRVLLLLFCCRNMIAFSWDVFVDSVRQYPTMN PLLFRNSQKAARALGCGSFPARLMVLLHLTSAISLICALRLARRFKVINT ENFNEQRIFLRFTFNLILKTLYFINVFPNYQLNVLKSFFSVYVSFSDVLL VSWILRSDIGCLTNNPGIQKAYPWGEANEEYQRQILTLNFLLLVIVNVLP FCLFSILMCRKGVKVLEEPQDWTVVMRSIRFGVALWIDLKSNIGRALRWL VQPYRGQASLIEMVTSFILPVCGVLFIFLMVEAPRRATIWTCLRLAIGIH FNILYKYQVQATRWGRRGSFFQHGIDVVIFLPLASILAVAVLKAWGRRYD FTRALKLPGQQNRPASFFRVAGGAQCVKISSIMGTLELSRTNVRDEVEAC AVSAFRASHPSYTFCNTSIGGASLLDYSLISLLSYLDKDSSDFHALFDPM AATDDWELEHEDAWGPATQDTSQNDDTAMVAVTGIPRARVLQLFSPSRNL SVIAVAGTNPLRPYDIFQDVLLFHRAFTFELASQFSPPLKWIPQKWKSFI LSLSSLPLHLLGSTNPYWYYHHTLIEEVKAQQRRKGIGRVVLTGHSLGGA IAQIVAAGAHVPVVSISSPGVSLLLSSLGIDPEPLKYLSVNVVHENDVLP MLDKLMGTVFILGCGSANPFRCHQPGQTICELLSHCKGSSAFIQCRLYQA back to topmRNA from alignment at CM002455.1:1450537..1453424+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna582 ID=rna582|Name=rna582|organism=Nannochloropsis gaditana|type=mRNA|length=2888bp|location=Sequence derived from alignment at CM002455.1:1450537..1453424+ (Nannochloropsis gaditana) GATGCAAACACCTCACCAGGCCTTGACCATTAAACAAGCACGATTTCTTC
AGGCCCAACACTTATCTTTGAAAAAAGTCAGAAATTTTGCGCTACATGCA
CGTAGAAATGCAGATGGAGCTTTTTTGTTCAatcatccttccttctttct
gtTGCAGAGGGCTGATAGAAGAGCTCGTATCTCCGGAGCAGTCACCACAC
ATTGCACTTTCCAGACGCGGTTGCATTGATGTCTGGGCCGGAATCCTCCG
CTGCTATTGAGCCTCTAAGGCAGCTTGGCATCATGCCTGCCTTGATTGCG
GGATGGTCGGCCTTTCCTGCTTTTATGTTGTTATTGACCTCTCAGCTAAA
TCACCTTTATACTCAATTTGCACCGTTCCTGTTAAGCATCGAAATGGAGC
CGCAAAATCTGTCATCATTTCTCATCATAACATTCCGAGTGCTACTACTG
CTCTTTTGTTGCCGAAACATGATCGCCTTTTCCTGGGATGTTTTCGTTGA
TTCGGTGAGACAATATCCGACCATGAACCCCTTGTTATTTCGAAACAGCC
AAAAAGCGGCACGTGCTCTGGGCTGTGGATCATTCCCGGCTCGCCTTATG
GTATTGCTGCATCTGACTAGTGCTATTTCATTGATCTGCGCCTTGCGGCT
TGCAAGACGCTTCAAGGTCATAAACACGGAGAATTTCAACGAACAGCGTA
TTTTTCTTCGATTTACCTTCAATCTTATTCTCAAAACACTATATTTCATA
AATGTCTTCCCAAACTATCAACTAAATGTACTGAAAAGCTTTTTTTCGGT
TTACGTTTCCTTCTCGGATGTATTGCTTGTTTCTTGGATACTCCGTTCTG
ACATCGGTTGCCTTACCAATAATCCCGGCATACAAAAGGCTTATCCCTGG
GGTGAGGCGAATGAAGAATACCAGCGGCAAATACTGACCCTCAATTTTCT
CCTTTTGGTGATTGTAAATGTGTTACCTTTTTGTCTTTTTTCGATTTTGA
TGTGCAGAAAAGGAGTTAAAGTGTTGGAAGAACCCCAAGACTGGACAGTT
GTTATGAGAAGGTGCAGAAATGTTTCCATGGCCATTGTCGTTGTAGGTTG
GGGTTTCTCTCTATGTATGACTGGTTTATTGCCTtcatttttctcccttt
GCCTACTCATCAATGGTATCTCTCTGAATCGGTTTCTATTATCTTCCGTC
GTCGAAAGTATCCGATTCGGAGTCGCACTCTGGATTGACTTGAAAAGCAA
CATTGGGAGAGCACTTCGGTGGCTTGTCCAACCATATCGGGGACAGGCCT
CGTTGATAGAGATGGTGACGTCGTTTATATTGCCGGTATGTGGAGTACTT
TTTATATTTTTAATGGTTGAAGCTCCACGGAGAGCAACGATTTGGACCTG
CCTTCGGCTAGCAATAGGAATACACTTCAATATCTTGTACAAATACCAAG
TACAAGCGACGCGTTGGGGCCGACGCGGCAGTTTCTTCCAGCATGGCATC
GACGTGGTtattttcctcccactcgctTCAATTTTAGCGGTAGCAGTACT
CAAGGCCTGGGGTCGCAGGTATGATTTCACTCGAGCTCTCAAGTTGCCGG
GGCAGCAAAATCGTCCAGCTTCGTTCTTCCGCGTGGCAGGCGGTGCTCAA
TGTGTAAAAATTTCTTCCATCATGGGAACTTTGGAACTCTCACGCACAAA
TGTTCGTGATGAAGTTGAAGCATGTGCGGTCTCTGCATTCCGGGCTAGCC
ACCCGTCATACACTTTTTGCAACACCTCAATTGGGGGGGCAAGCCTTCTC
GACTACTCTCTGATATCGCTCTTGAGCTACCTGGACAAGGATAGCAGTGA
TTTTCATGCCTTGTTCGATCCAATGGCGGCAACAGACGATTGGGAATTAG
AGCATGAGGATGCTTGGGGCCCGGCGACCCAAGATACAAGCCAAAATGAC
GATACAGCTATGGTGGCAGTGACAGGCATCCCACGGGCACGTGTCTTACA
GCTTTTCTCTCCAAGTCGGAATTTGAGTGTCATTGCAGTAGCAGGAACCA
ATCCACTCCGACCTTATGACATTTTTCAGGACGTGTTATTGTTTCATCGG
GCATTTACATTTGAACTTGCCTCTCAATTCAGCCCACCTTTGAAATGGAT
TCCACAGAAATGGAAGTCTTTTATCTTGTCCCTAAGCTCTCTACCTCTGC
ATCTGCTGGGCTCAACCAATCCGTATTGGTATTATCACCACACTCTCATT
GAAGAAGTTAAGGCCCAGCAACGGCGTAAAGGCATAGGAAGAGTAGTACT
TACAGGCCATTCCCTTGGGGGAGCCATAGCTCAGATTGTGGCCGCCGGTG
CTCACGTTCCTGTCGTGTCAATCTCTTCCCCGGGAGTTTCCTTGTTATTG
AGCAGCCTCGGCATTGATCCTGAACCGCTTAAGTACTTAAGCGTCAACGT
CGTACACGAAAATGATGTTTTACCTATGCTCGACAAGCTGATGGGTACCG
TCTTCATCCTGGGCTGTGGGTCCGCGAATCCGTTTCGGTGTCATCAGCCT
GGCCAGACAATTTGCGAGCTCTTGAGCCATTGTAAAGGTTCGAGTGCTTT
TATACAGTGCCGTCTATATCAGGCATGACTGAATGGTATAGGTACGAAGC
TTCTgacggagcaaggagggaccAATGATCACGAAAATTATCCTTTTGAA
AGTGAACCAGTCTGCCAGAGGATAATCGAGgtaagagggagagagcatgT
AAGAATGTAAAAGGGAACAAATAGACAATCGCTTCAGAAATTTATACGAT
AAATCTTTGATTTGTACGAAGAGCAAGTAGGCAAGGGCGATGCCGATGAC
ACGCCTGACCACTGTCGTTAACCTTAAAATATCACACC back to topCoding sequence (CDS) from alignment at CM002455.1:1450537..1453424+ >rna582 ID=rna582|Name=rna582|organism=Nannochloropsis gaditana|type=CDS|length=4506bp|location=Sequence derived from alignment at CM002455.1:1450537..1453424+ (Nannochloropsis gaditana) ATGTCTGGGCCGGAATCCTCCGCTGCTATTGAGCCTCTAAGGCAGCTTGG CATCATGCCTGCCTTGATTGCGGGATGGTCGGCCTTTCCTGCTTTTATGT TGTTATTGACCTCTCAGCTAAATCACCTTTATACTCAATTTGCACCGTTC CTGTTAAGCATCGAAATGGAGCCGCAAAATCTGTCATCATTTCTCATCAT AACATTCCGAGTGCTACTACTGCTCTTTTGTTGCCGAAACATGATCGCCT TTTCCTGGGATGTTTTCGTTGATTCGGTGAGACAATATCCGACCATGAAC CCCTTGTTATTTCGAAACAGCCAAAAAGCGGCACGTGCTCTGGGCTGTGG ATCATTCCCGGCTCGCCTTATGGTATTGCTGCATCTGACTAGTGCTATTT CATTGATCTGCGCCTTGCGGCTTGCAAGACGCTTCAAGGTCATAAACACG GAGAATTTCAACGAACAGCGTATTTTTCTTCGATTTACCTTCAATCTTAT TCTCAAAACACTATATTTCATAAATGTCTTCCCAAACTATCAACTAAATG TACTGAAAAGCTTTTTTTCGGTTTACGTTTCCTTCTCGGATGTATTGCTT GTTTCTTGGATACTCCGTTCTGACATCGGTTGCCTTACCAATAATCCCGG CATACAAAAGGCTTATCCCTGGGGTGAGGCGAATGAAGAATACCAGCGGC AAATACTGACCCTCAATTTTCTCCTTTTGGTGATTGTAAATGTGTTACCT TTTTGTCTTTTTTCGATTTTGATGTGCAGAAAAGGAGTTAAAGTGTTGGA AGAACCCCAAGACTGGACAGTTGTTATGAGAAGTATCCGATTCGGAGTCG CACTCTGGATTGACTTGAAAAGCAACATTGGGAGAGCACTTCGGTGGCTT GTCCAACCATATCGGGGACAGGCCTCGTTGATAGAGATGGTGACGTCGTT TATATTGCCGGTATGTGGAGTACTTTTTATATTTTTAATGGTTGAAGCTC CACGGAGAGCAACGATTTGGACCTGCCTTCGGCTAGCAATAGGAATACAC TTCAATATCTTGTACAAATACCAAGTACAAGCGACGCGTTGGGGCCGACG CGGCAGTTTCTTCCAGCATGGCATCGACGTGGTtattttcctcccactcg ctTCAATTTTAGCGGTAGCAGTACTCAAGGCCTGGGGTCGCAGGTATGAT TTCACTCGAGCTCTCAAGTTGCCGGGGCAGCAAAATCGTCCAGCTTCGTT CTTCCGCGTGGCAGGCGGTGCTCAATGTGTAAAAATTTCTTCCATCATGG GAACTTTGGAACTCTCACGCACAAATGTTCGTGATGAAGTTGAAGCATGT GCGGTCTCTGCATTCCGGGCTAGCCACCCGTCATACACTTTTTGCAACAC CTCAATTGGGGGGGCAAGCCTTCTCGACTACTCTCTGATATCGCTCTTGA GCTACCTGGACAAGGATAGCAGTGATTTTCATGCCTTGTTCGATCCAATG GCGGCAACAGACGATTGGGAATTAGAGCATGAGGATGCTTGGGGCCCGGC GACCCAAGATACAAGCCAAAATGACGATACAGCTATGGTGGCAGTGACAG GCATCCCACGGGCACGTGTCTTACAGCTTTTCTCTCCAAGTCGGAATTTG AGTGTCATTGCAGTAGCAGGAACCAATCCACTCCGACCTTATGACATTTT TCAGGACGTGTTATTGTTTCATCGGGCATTTACATTTGAACTTGCCTCTC AATTCAGCCCACCTTTGAAATGGATTCCACAGAAATGGAAGTCTTTTATC TTGTCCCTAAGCTCTCTACCTCTGCATCTGCTGGGCTCAACCAATCCGTA TTGGTATTATCACCACACTCTCATTGAAGAAGTTAAGGCCCAGCAACGGC GTAAAGGCATAGGAAGAGTAGTACTTACAGGCCATTCCCTTGGGGGAGCC ATAGCTCAGATTGTGGCCGCCGGTGCTCACGTTCCTGTCGTGTCAATCTC TTCCCCGGGAGTTTCCTTGTTATTGAGCAGCCTCGGCATTGATCCTGAAC CGCTTAAGTACTTAAGCGTCAACGTCGTACACGAAAATGATGTTTTACCT ATGCTCGACAAGCTGATGGGTACCGTCTTCATCCTGGGCTGTGGGTCCGC GAATCCGTTTCGGTGTCATCAGCCTGGCCAGACAATTTGCGAGCTCTTGA GCCATTGTAAAGGTTCGAGTGCTTTTATACAGTGCCGTCTATATCAGGCA TGAATGTCTGGGCCGGAATCCTCCGCTGCTATTGAGCCTCTAAGGCAGCT TGGCATCATGCCTGCCTTGATTGCGGGATGGTCGGCCTTTCCTGCTTTTA TGTTGTTATTGACCTCTCAGCTAAATCACCTTTATACTCAATTTGCACCG TTCCTGTTAAGCATCGAAATGGAGCCGCAAAATCTGTCATCATTTCTCAT CATAACATTCCGAGTGCTACTACTGCTCTTTTGTTGCCGAAACATGATCG CCTTTTCCTGGGATGTTTTCGTTGATTCGGTGAGACAATATCCGACCATG AACCCCTTGTTATTTCGAAACAGCCAAAAAGCGGCACGTGCTCTGGGCTG TGGATCATTCCCGGCTCGCCTTATGGTATTGCTGCATCTGACTAGTGCTA TTTCATTGATCTGCGCCTTGCGGCTTGCAAGACGCTTCAAGGTCATAAAC ACGGAGAATTTCAACGAACAGCGTATTTTTCTTCGATTTACCTTCAATCT TATTCTCAAAACACTATATTTCATAAATGTCTTCCCAAACTATCAACTAA ATGTACTGAAAAGCTTTTTTTCGGTTTACGTTTCCTTCTCGGATGTATTG CTTGTTTCTTGGATACTCCGTTCTGACATCGGTTGCCTTACCAATAATCC CGGCATACAAAAGGCTTATCCCTGGGGTGAGGCGAATGAAGAATACCAGC GGCAAATACTGACCCTCAATTTTCTCCTTTTGGTGATTGTAAATGTGTTA CCTTTTTGTCTTTTTTCGATTTTGATGTGCAGAAAAGGAGTTAAAGTGTT GGAAGAACCCCAAGACTGGACAGTTGTTATGAGAAGTATCCGATTCGGAG TCGCACTCTGGATTGACTTGAAAAGCAACATTGGGAGAGCACTTCGGTGG CTTGTCCAACCATATCGGGGACAGGCCTCGTTGATAGAGATGGTGACGTC GTTTATATTGCCGGTATGTGGAGTACTTTTTATATTTTTAATGGTTGAAG CTCCACGGAGAGCAACGATTTGGACCTGCCTTCGGCTAGCAATAGGAATA CACTTCAATATCTTGTACAAATACCAAGTACAAGCGACGCGTTGGGGCCG ACGCGGCAGTTTCTTCCAGCATGGCATCGACGTGGTtattttcctcccac tcgctTCAATTTTAGCGGTAGCAGTACTCAAGGCCTGGGGTCGCAGGTAT GATTTCACTCGAGCTCTCAAGTTGCCGGGGCAGCAAAATCGTCCAGCTTC GTTCTTCCGCGTGGCAGGCGGTGCTCAATGTGTAAAAATTTCTTCCATCA TGGGAACTTTGGAACTCTCACGCACAAATGTTCGTGATGAAGTTGAAGCA TGTGCGGTCTCTGCATTCCGGGCTAGCCACCCGTCATACACTTTTTGCAA CACCTCAATTGGGGGGGCAAGCCTTCTCGACTACTCTCTGATATCGCTCT TGAGCTACCTGGACAAGGATAGCAGTGATTTTCATGCCTTGTTCGATCCA ATGGCGGCAACAGACGATTGGGAATTAGAGCATGAGGATGCTTGGGGCCC GGCGACCCAAGATACAAGCCAAAATGACGATACAGCTATGGTGGCAGTGA CAGGCATCCCACGGGCACGTGTCTTACAGCTTTTCTCTCCAAGTCGGAAT TTGAGTGTCATTGCAGTAGCAGGAACCAATCCACTCCGACCTTATGACAT TTTTCAGGACGTGTTATTGTTTCATCGGGCATTTACATTTGAACTTGCCT CTCAATTCAGCCCACCTTTGAAATGGATTCCACAGAAATGGAAGTCTTTT ATCTTGTCCCTAAGCTCTCTACCTCTGCATCTGCTGGGCTCAACCAATCC GTATTGGTATTATCACCACACTCTCATTGAAGAAGTTAAGGCCCAGCAAC GGCGTAAAGGCATAGGAAGAGTAGTACTTACAGGCCATTCCCTTGGGGGA GCCATAGCTCAGATTGTGGCCGCCGGTGCTCACGTTCCTGTCGTGTCAAT CTCTTCCCCGGGAGTTTCCTTGTTATTGAGCAGCCTCGGCATTGATCCTG AACCGCTTAAGTACTTAAGCGTCAACGTCGTACACGAAAATGATGTTTTA CCTATGCTCGACAAGCTGATGGGTACCGTCTTCATCCTGGGCTGTGGGTC CGCGAATCCGTTTCGGTGTCATCAGCCTGGCCAGACAATTTGCGAGCTCT TGAGCCATTGTAAAGGTTCGAGTGCTTTTATACAGTGCCGTCTATATCAG GCATGA back to top
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