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Properties
| Property Name | Value |
|---|
| Product | P60-like protein |
| Orig transcript id | gnl|cribi|Naga_100709g1.2283.mrna |
| Orig protein id | gnl|cribi|Naga_100709g1.2283 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:920886..922379 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5819 ID=rna5819|Name=rna5819|organism=Nannochloropsis gaditana|type=mRNA|length=1200bp
CTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCCCCGGCATG
TAGGCCCCTGCTTCCCTCCATAAGCCTTCTCACCCTTTTCCCTCCCTCCT
CCTCGGTTTGCCGGCAGGTTGATTTGCGATGGGACGTTTTCCTAGGCACC
TACTACTACTGGCGGCTCATTAAAGGCGTGCCCCTGGTGCCGTGGGGGTT
CATCGTGCCGGAGGAGGCGCCCTGGCCGTTTTTCTGCCGGGGGGTTGAGC
TGGGGAAAATGTGCGACATGATCCGGAGGCATCAGGAGGTCTTCTTCCGG
TACTACCCCGAGCGCGTGCAAACGCTGGAGTACTTTGGATGGAAGTGGTG
GTGGCCAAGCATGGAGGAGGGGGAGGAGCCCGAGGCCCCACAGGCATATA
ACCGCTACAACAATTTCGAAGGCATGGACCTGGTGCTCAAACTCAAATTT
GTGGACCCGGAGATCTTGTCGGACGCGGAGGTGCCGGACTTCGAAGCCCT
CCAAAAGGAGGTCCCAGAGGCCATTCCCTGGCGGGAACAGGACCATCGGG
TGGGCAGCGAGTCCATCCTCGAAGATGAACAGGCCCCTACGGATATTTTC
TTCGTCCCGGGCCTACGCCGTCATCAACGTCGGCAGGCGCGCTTGGCAGG
GAAAGGGAAGACAGTGGGCGGCGCAGAGGCTGCCGGCATGAATGGAGGGA
AAGAGGGAGGGGGGGAGGGCGGGAGGGAGGAAGGTCTTCCCGAGAAGAAA
ACCAGAGGCAGGAAGGTAGGGAGTGGGGCGGGAGGGAAGCGGAAGGGCAA
GAAGGAAGGAGGGGGGGAAGAGGGGGAGGAGGTGACAGGGACGTCGGCGA
AGGTGGGAGGGACAACGGGCCCGAAGAAACGGGGCAGGAAACCCAAAGTG
GTCGAGTAGGTGCAGACAGAAAGAGGGAGGGAGAGGAAAGGAGAAGGGGC
GAATAAAGCGTAGGGTCGTCAGGGTGGGGTCGAGGGTGGTTGGTAGGAAC
GAAGGACTGTGGTTCGGGGGATTAAAGGCACTGAGACAGATAGGTGGTGA
TGGCGGGGGAGGGAGCGGGCATGTGGGCCGGAGAGGGGAGACAGGAGGTT
GGAAGGAGAGGGGGAGGGAGGGAGTTAGGGAGGGGGAGCAAGCAGGGCAT
CGCGTCCTTATCTTCAAGAAAAGAAACGCGCAACTGAAGCATGGTCTAAT back to topprotein sequence of rna5819 >rna5819-protein ID=rna5819-protein|Name=rna5819|organism=Nannochloropsis gaditana|type=polypeptide|length=416bp
MGRLDSARKGNIARKRRLQAVAEEFEADRALQVEESLDAAKPDEDLFFVD
TSADTTLPPTRSKAEKRRRFFSEKVSSVAMPSEHLVKAVQRIVKSQQKEK
KAKPDDDGAGKTSIHRQSKGKVEQQGLYDMWDAGKGSTGGKGKSKKGKKC
EAPPVPKSKKRPLKPPLASTLSLIERPLGGQSYNPLAEDHQQALVAAVSV
EEKRKKALEKLKAPLSVMSEETKALILSDSESDAEEEGALEERSDGDAGV
ATKRMLRRKGKQTKAERNKQRRRKIQEHEAALERERKHLLQEASRAQEYA
KALRRREAEAGGAKRKRQTDDQNVPKNHRSQHFVPRDLPREKVLLPMDKN
PMQAPSFPVPLSDELGGSLRTVRTKGNLASETLVSLQRRGQYEVVPQRKS
ARPKPRVKFVEKIRGE back to topmRNA from alignment at CM002466.1:920886..922379- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5819 ID=rna5819|Name=rna5819|organism=Nannochloropsis gaditana|type=mRNA|length=1494bp|location=Sequence derived from alignment at CM002466.1:920886..922379- (Nannochloropsis gaditana)
TCCTGCTTTCCGACCACCCACCATGGCCGCCACCATTTCCTCTCCTTACA
CATCCCATTCCCCAATCTTGCTCCTTAGCACCCACACCAAAATAGTGATA
GCAATCGCATGGGTCGACTGGATAGTGCCCGTAAGGGCAATATTGCTCGG
AAGCGTCGCCTTCAGGCGGTGGCGGAGGAATTTGAGGCAGACCGGGCTCT
GCAAGTTGAGGAGTCTCTGGACGCAGCGAAGCCGGACGAGGATCTATTTT
TCGTAGACACCAGCGCTGATACCACTTTACCACCCACGCGAAGCAAGGCT
GAAAAGCGTCGGCGCTTCTTTAGTGAGAAAGTGAGCTCTGTGGCAATGCC
CTCTGAGCATCTAGTCAAAGCAGTACAGCGTATCGTCAAAAGTCAACAGA
AAGAGAAAAAGGCCAAACCGGACGATGATGGAGCAGGGAAAACCAGTATT
CATCGACAGTCGAAAGGAAAGGTCGAGCAACAGGGTCTTTACGATATGTG
GGATGCAGGAAAGGGAAGCACAGGAGGGAAGGGCAAAAGCAAGAAGGGAA
AGAAATGTGAAGCCCCCCCCGTCCCTAAATCCAAAAAGCGGCCATTGAAA
CCGCCTCTTGCCTCTACATTGTCACTGATCGAGCGGCCGCTAGGAGGACA
GTCATACAATCCTCTAGCAGAGGACCATCAGCAGGCATTGGTGGCTGCGG
TGTCGGTGGAGGAAAAGCGGAAAAAAGCGTTGGAAAAACTGAAAGCACCG
CTCAGTGTCATGAGTGAGGAAACGAAGGCGCTGATATTGAGCGATTCTGA
GAGCGATGCAGAGGAAGAGGGGGCATTGGAGGAAAGGAGCGACGGGGATG
CAGGCGTGGCGACGAAGCGGATGTTGAGAAGGAAGGGGAAACAGACCAAG
GCGGAGAGGAACAAACAACGGCGCCGAAAGATCCAGGAGCACGAAGCCGC
GCTAGAAAGAGAACGGAAGCACCTGCTGCAAGAAGCTTCCAGGGCGCAAG
AATACGCCAAGGCCCTTCGTCGACGAGAAGCCGAAGCAGGAGGCGCGAAG
AGGAAACGGCAGACGGATGACCAGAACGTCCCGAAAAACCACCGAAGCCA
GCACTTTGTTCCCCGAGATCTACCCCGGGAGAAAGTGTTACTACCCATGG
ATAAAAATCCCATGCAGGCCCCGTCTTTTCCTGTTCCTCTTTCCGATGAA
TTGGGGGGCAGCCTGCGGACCGTGCGGACGAAAGGCAATTTGGCGTCCGA
GACCCTGGTGTCTTTGCAAAGAAGGGGACAGTACGAGGTCGTGCCGCAAC
GAAAGAGCGCTCGACCAAAGCCGCGGGTTAAATTTGTGGAAAAAATAAGG
GGAGAATAGCCGCAGGGAAGGATTCAAGGGATGTGTGGAGAAAAATAGGG
TAGAAAAGACGATTGTTCGAAGAGGTAATCTGTTAGCGAGGAAGGGAACC
AAAAAAAAGAGCAAAGCATTCATGGCCAGCTTCCACGCGCAATA back to topCoding sequence (CDS) from alignment at CM002466.1:920886..922379- >rna5819 ID=rna5819|Name=rna5819|organism=Nannochloropsis gaditana|type=CDS|length=1251bp|location=Sequence derived from alignment at CM002466.1:920886..922379- (Nannochloropsis gaditana)
ATGGGTCGACTGGATAGTGCCCGTAAGGGCAATATTGCTCGGAAGCGTCG
CCTTCAGGCGGTGGCGGAGGAATTTGAGGCAGACCGGGCTCTGCAAGTTG
AGGAGTCTCTGGACGCAGCGAAGCCGGACGAGGATCTATTTTTCGTAGAC
ACCAGCGCTGATACCACTTTACCACCCACGCGAAGCAAGGCTGAAAAGCG
TCGGCGCTTCTTTAGTGAGAAAGTGAGCTCTGTGGCAATGCCCTCTGAGC
ATCTAGTCAAAGCAGTACAGCGTATCGTCAAAAGTCAACAGAAAGAGAAA
AAGGCCAAACCGGACGATGATGGAGCAGGGAAAACCAGTATTCATCGACA
GTCGAAAGGAAAGGTCGAGCAACAGGGTCTTTACGATATGTGGGATGCAG
GAAAGGGAAGCACAGGAGGGAAGGGCAAAAGCAAGAAGGGAAAGAAATGT
GAAGCCCCCCCCGTCCCTAAATCCAAAAAGCGGCCATTGAAACCGCCTCT
TGCCTCTACATTGTCACTGATCGAGCGGCCGCTAGGAGGACAGTCATACA
ATCCTCTAGCAGAGGACCATCAGCAGGCATTGGTGGCTGCGGTGTCGGTG
GAGGAAAAGCGGAAAAAAGCGTTGGAAAAACTGAAAGCACCGCTCAGTGT
CATGAGTGAGGAAACGAAGGCGCTGATATTGAGCGATTCTGAGAGCGATG
CAGAGGAAGAGGGGGCATTGGAGGAAAGGAGCGACGGGGATGCAGGCGTG
GCGACGAAGCGGATGTTGAGAAGGAAGGGGAAACAGACCAAGGCGGAGAG
GAACAAACAACGGCGCCGAAAGATCCAGGAGCACGAAGCCGCGCTAGAAA
GAGAACGGAAGCACCTGCTGCAAGAAGCTTCCAGGGCGCAAGAATACGCC
AAGGCCCTTCGTCGACGAGAAGCCGAAGCAGGAGGCGCGAAGAGGAAACG
GCAGACGGATGACCAGAACGTCCCGAAAAACCACCGAAGCCAGCACTTTG
TTCCCCGAGATCTACCCCGGGAGAAAGTGTTACTACCCATGGATAAAAAT
CCCATGCAGGCCCCGTCTTTTCCTGTTCCTCTTTCCGATGAATTGGGGGG
CAGCCTGCGGACCGTGCGGACGAAAGGCAATTTGGCGTCCGAGACCCTGG
TGTCTTTGCAAAGAAGGGGACAGTACGAGGTCGTGCCGCAACGAAAGAGC
GCTCGACCAAAGCCGCGGGTTAAATTTGTGGAAAAAATAAGGGGAGAATA
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