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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100116g7.9018.mrna |
| Orig protein id | gnl|cribi|Naga_100116g7.9018 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:858053..860242 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5794 ID=rna5794|Name=rna5794|organism=Nannochloropsis gaditana|type=mRNA|length=2605bp
AGGAGAAAGGGTGGGAGCTGCGGTGACGGCACACACGGAGGACAGGCAGG
CAGGGGCGTCCACAACCACTCCGGGGTTAGCCAGCCGTGACGTGGACTTT
CTCCTTGGAGGAAGCTGGGACCTAGGCCGGTCGAAGCGTTCGGAGAAGCA
GGACGAGCGAGCGAGTATCTTGCAGTTGGCCACCCGCGATCAGGCCTTCA
TTTTCGACCTGTGGAGCCTGGCGGGAAGAGGCGCATGGGCGCCCGTCGAG
TTTCACGCGGACGGGTCCCAGGGAGGATCGACGCTAAGGGCGGGACTGGA
TGCCTGCCTGGGACCTCTGTTTGAAGATGCGCGTGTCCTGAAGCTGGGCT
TCGGCCTAGGCGGGGACTTGGACGTTTTGCGTCGTTCATGGCCCCAGATC
AAGGCGTTCCAGACCCTGGTGGGTGCCTTGGATGTGGGCGATTTGCGAAC
GGGGAGCGCCGGCGTCTTTTCTACTCGGCCAGGGTCAAGGGCACGGGGTC
GTGGCGGTGGGGAGGCTCAAGCCAAAGGGCTCTCGGCGGTGTGTAGGCAA
TGGCTGGGGAAAGATTTGAACAAGGCGGAGCAAGTCTCCGATTGGGATGC
ACGGCCACTGAGTGCGTCGCAAGTGAAGTATGCGGCGATGGACGCGTGGG
TGTTGACAGCAATTTTCGATGAGTTTTGTCGCCGGGGTTCCGAGCAGGCG
CGAAGGGAGTGGTTGGGGCGCAGACGCACTTTCCAGGGCAGGAAGGAAAG
GTGGATGCAGGAGGAAAAGGACGGGGAGAGGGAAAGCAAAGGGGAGGGAC
AAGGCGCAGGAACTTGTGTAGTGAAGTCTGTGGGGGGTCCCGTAAGTGGC
GGGGGGGCTGCTGAGAATGGTATGGACGGAGGGCATGGTGACTCAAGCCA
TCGAACTAGTCATGGCAGCAGCTGTCCGATAGAAACCTACGTGTTGGAGG
CTTACAGCAGCGGCCATGTGCCACACATGGCCTCGACCCCCACCTTCCCT
CCCATCACTTTCTTCGACGAGGACACCTCCGATCCGGGTATCCTGCCGGC
TGACTTTCCGCAAGCCTTGAGGACGAAAAGTGTCGCCTTGATGGTGACCG
GCAACCTTTCAGTGCCTACATCTCAGACTAAAGCCTCACGCCGGACGGAC
CCTGCAAAAGAAATGGAGGAGGATGGAGTGGTGGGGGGGGAGAGGGAAGA
TGGAGCCACGGGCGGACAGCGGCCCCCAGAGGTTACGTGCACCCCCCTCC
TTGTGGTCGCACCCGCCACCGCCAAAGTCAACTTCTCCCGTCTGGCGGCA
TGGTTGGGCTTGCCCCGGGCGGCCTTACGCCTGGCCACGGCCGACGAATG
CCTCTCTGTGCTCGCTTTCCCTCCCGGCTCTATTCCCCCCGTTGGGCACC
GGACGCCCGCCCGCATGGTGCTGGATCAGAGCCTGTGTCCGCACCCTCCT
CCCTCTTTTACCCTTGTCCCTGTTGACACCCTGTCACCGGCGTCACCTCG
CGCCATGCCCCGTCTTCTTTGTGGGGCGGGGGCTCCCAACAAGGTATTTA
TTTGTCGGCCAGAGGAACTGCTTGGCCTGGGGGGGGCAAATGCAGTGGTC
GCGCCGGTATGTTCATCCTCCTCCACTGGCAGTGCTTCCTCCCCCTTCGC
ACCTTTAAACCCCTTGTCCGGCCTCCCGTCGGCCGTCTGCAGTGCCTTGA
CCGGATCGACAGAAGGGAAAGAAAAAGGCCCACGCCTCGCACCAGGGGAC
AAGGAGACAAGGGAGGAGCTCACTTTCCTTGTCGACTCCATGTTGGGCCG
CCTGTCGAAATGGCTGCGGGTGCTTGGTGTGGACGTGGAATTTCACGATT
TTCACCTCACCTCCATCCTGTCCCACAAGGCTGCTAGCAGTCTGACCCAC
ACGAGCACCAGCATTCGTCCCGCCCCTCCCGGTACGCCCCCCCCAATCCT
GTTGAGGGCACATCGGTCCAAGCGCGTAGTCCTGACGAGGGATCGGCGCT
TGGTCGAAAGCCGACACAATGCCTTGCTAGGTGTGTACACCTATCTGGTG
CAGGGAAACGATACCCGGCAGCAGTTGGAGCAGGTGGTTGAAACTTTTAA
AATTCAGTTGGACGTGGAGGAGCTGATGAGCCGGTGCTCGGGCTGCAATG
CGAAGGGGTACGTGGCATTGAGCAAGGAGGAAATTGAGGCGCGGCAGGAC
ATCCCCGAGCGGGTGAAGAGGAATGTGGACACCTTCTGGACCTGTGTGAA
CGAGGAGTGTGAGAAACTCTATTGGAAAGGAGAGATGTGGAACAAAGCTT
CGAGCAAGTTTGGGAGAATGATAGCGGAGATGACGGGGAGGACGGAGAGA
CTGGGAGGACCCGAGGCATTCGACAGGATGGGGGAAGGAGGGGAAGACGA
GGATGAGGAGGAGGAGGAAGGAGAGGAGGAAGAGGAAGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAAGTGGAGGAGGAGGAGGAAGTGGAG
GAGGAGGAGGAAGTGGAGGAGCGAGGGTGCGCGGGAAAACCGTCAGTGAA
GGCGGCTTGTCGATACCTTGTACAGATCGCTCACACTCTGCATACCACGA
GCTAG back to topprotein sequence of rna5794 >rna5794-protein ID=rna5794-protein|Name=rna5794|organism=Nannochloropsis gaditana|type=polypeptide|length=510bp
MLTREEKVAGSHATPALSAAETFDFELSCVKGATGWKEADCDKADNQVHV
THPWIPRDNTVEVLRDDSGEGNCINDDQLPAIHPSTQITGASEPSEARIL
QSSAFLASTPELQLEKCKSLILNALVPKARVLGSQSVTQGEKWDLTFRLE
RLFTYGVKASQCRRARSHRNKEAGWLLKESVDRAIWDALGTIATDKQQPP
KAHEEEKKKKKFKKKKKDKKLTPSRHSGSDTTVVSALTHVLAHTLAQDLD
AALASRVSVLGLICLVERGLTPMFLSLWLNAVRASGCLNALFAASEMPDS
THQEITPLPVHEDCQVIAACLNRSLSDIFRGHTRAVKPKCIVTFLDVTSP
ALPFLPILRDPVSQLYVQRLLNGLGGVAEAKAGGALGAYLRGPPSLHAHF
FRLVLLSTPPDVALDILKRYQAQHGAVALQPLGMTEALLQVVMARGLYRF
AYLAALDMNVLDTYPVIERVYREEKIKQLVTRGKWQFAVLMLDQLRQRTA
RKWRSMWSTT back to topmRNA from alignment at CM002466.1:858053..860242- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5794 ID=rna5794|Name=rna5794|organism=Nannochloropsis gaditana|type=mRNA|length=2190bp|location=Sequence derived from alignment at CM002466.1:858053..860242- (Nannochloropsis gaditana)
ATGTTGACAAGGTTGGAGCATACACCACAGACAAAGACCAGTGCTTTCAT
TTGGCGGTATCGGAGCAAAGTGATAACAATGAGGGGTTGCGCACGCGTGG
AAGACGGCGCAGGAGATAGAAAAAGGAAGAACCTAAAACCACGGGAGATG
AAAGAGAGGAGAAGGTCGCAGGCTCACATGCAACTCCAGCGTTGTCGGCG
GCAGAGACTTTTGATTTCGAGCTCAGTTGTGTGAAAGGCGCAACTGGATG
GAAGGAGGCGGATTGCGACAAAGCAGACAACCAGGTGCATGTCACGCACC
CCTGGATCCCTCGTGACAACACCGTGGAAGTCTTGAGAGATGACAGTGGC
GAGGGCAATTGTATTAACGACGATCAGCTTCCTGCCATTCATCCGTCCAC
CCAAATTACTGGTGCCTCAGAGCCTTCCGAGGCAAGAATTCTGCAATCTT
CAGCGTTCTTGGCTAGTACGCCCGAACTTCAGCTGGAAAAATGCAAAAGT
CTGATACTAAACGCCCTGGTGCCAAAGGCGCGGGTCTTAGGATCACAAAG
CGTCACTCAAGGGGAAAAATGGGACCTGACTTTTCGTCTCGAGCGATTGT
TCACCTACGGGGTAAAAGCGAGCCAGTGTAGACGGGCGCGCAGCCACAGG
AATAAAGAGGCGGGCTGGCTGCTGAAAGAGAGTGTCGACCGTGCCATTTG
GGACGCGCTTGGCACCATCGCGACGGACAAGCAGCAGCCGCCGAAAGCGC
ACGAGGAGGAGAAGAAGAAAAAGAAGTTCAAGAAAAAGAAGAAAGACAAG
AAGCTGACTCCTTCCCGACATAGCGGGAGTGACACCACAGTGGTTTCGGC
ACTCACCCACGTCTTGGCCCATACCCTCGCGCAGGATCTGGACGCCGCGT
TGGCGAGTCGCGTGAGTGTGCTGGGGTTGATCTGCCTGGTGGAGAGGGGC
CTGACACCGATGTTCCTCTCCCTTTGGCTCAATGCTGTGAGGGCCTCCGG
CTGCCTAAACGCGCTGTTTGCTGCCTCTGAAATGCCCGACTCTACCCATC
AGGAGATCACGCCGCTGCCAGTCCATGAGGACTGCCAGGTCATTGCCGCA
TGCTTGAACCGATCCTTGTCGGACATTTTCCGAGGCCACACGCGTGCGGT
CAAACCCAAGTGCATCGTCACTTTCCTGGACGTCACGAGTCCTGCCTTAC
CCTTTTTGCCCATCCTCCGCGACCCGGTCAGCCAGTTATACGTGCAACGC
CTCTTGAATGGGCTCGGGGGGGTGGCCGAAGCCAAGGCAGGCGGGGCCCT
GGGTGCCTACCTGCGGGGCCCGCCATCTCTCCACGCGCACTTCTTCCGCC
TGGTGCTCTTGTCGACTCCGCCGGACGTGGCGTTGGACATTTTGAAACGC
TACCAAGCGCAACATGGAGCGGTAGCCTTGCAACCCTTGGGTATGACAGA
GGCGTTGCTGCAAGTAGTCATGGCCAGAGGCCTCTATCGCTTTGCCTATC
TGGCCGCCCTGGACATGAATGTGTTGGATACCTATCCCGTTATCGAACGA
GTGTACAGAGAGGAGAAGATCAAGCAATTGGTCACGCGGGGGAAATGGCA
ATTTGCTGTCTTGATGCTGGATCAACTCCGGCAGCGGACGGCAAGGAAAT
GGAGTGAGGGACAAAGGTGTGGAGGGAGGGAGCAGAGGAGGGGTACCAGC
GGAGTAAAAATGAGAACGAAGACGGAAAGGAGGGATGGAGAAGACGGAGA
TGGATCCTGTAGAGAAGCGGTGCTGGAAAGAAGCAAGGAATCAGCCCGGG
TCGATCGAAGGGAGGGAGCAAATGGGGAGGAGGGTACAGGGGAGGCGGAA
GCCGATCCGCTGGTGCGTCGATTGGGCGCGACCCTGGTCAAGGCTTTGCT
GCTGCAACCCGGGCACCTGGCCCATGCGGCCAGGCTCCGACAGGTGTACG
GCCTCGAGGGGGAGATCCCAGCGCCGTCGCCCTCTGCCTTGGCGGAGGAA
GCGGCGGTGGAGCAGGAGAGGTACTTAAATTTCCCCGGGGCGGTCCGGGG
CCGGAGGGAGGCAGGGATGCCCGCGGGAAGGAGGAAAGACGAAAAGGGAG
CGGATGGAAAAAGGTGGGAGACTGGTCGGGAGGCGCAGTCGGAGAGAGCA
CAAATGAACGTGGACAGGATCTATGTGGTCCACGACCTAG back to topCoding sequence (CDS) from alignment at CM002466.1:858053..860242- >rna5794 ID=rna5794|Name=rna5794|organism=Nannochloropsis gaditana|type=CDS|length=4599bp|location=Sequence derived from alignment at CM002466.1:858053..860242- (Nannochloropsis gaditana)
GATCTATGTGGTCCACGACCTAGAGAGGAGAAGGTCGCAGGCTCACATGC
AACTCCAGCGTTGTCGGCGGCAGAGACTTTTGATTTCGAGCTCAGTTGTG
TGAAAGGCGCAACTGGATGGAAGGAGGCGGATTGCGACAAAGCAGACAAC
CAGGTGCATGTCACGCACCCCTGGATCCCTCGTGACAACACCGTGGAAGT
CTTGAGAGATGACAGTGGCGAGGGCAATTGTATTAACGACGATCAGCTTC
CTGCCATTCATCCGTCCACCCAAATTACTGGTGCCTCAGAGCCTTCCGAG
GCAAGAATTCTGCAATCTTCAGCGTTCTTGGCTAGTACGCCCGAACTTCA
GCTGGAAAAATGCAAAAGTCTGATACTAAACGCCCTGGTGCCAAAGGCGC
GGGTCTTAGGATCACAAAGCGTCACTCAAGGGGAAAAATGGGACCTGACT
TTTCGTCTCGAGCGATTGTTCACCTACGGGGTAAAAGCGAGCCAGTGTAG
ACGGGCGCGCAGCCACAGGAATAAAGAGGCGGGCTGGCTGCTGAAAGAGA
GTGTCGACCGTGCCATTTGGGACGCGCTTGGCACCATCGCGACGGACAAG
CAGCAGCCGCCGAAAGCGCACGAGGAGGAGAAGAAGAAAAAGAAGTTCAA
GAAAAAGAAGAAAGACAAGAAGCTGACTCCTTCCCGACATAGCGGGAGTG
ACACCACAGTGGTTTCGGCACTCACCCACGTCTTGGCCCATACCCTCGCG
CAGGATCTGGACGCCGCGTTGGCGAGTCGCGTGAGTGTGCTGGGGTTGAT
CTGCCTGGTGGAGAGGGGCCTGACACCGATGTTCCTCTCCCTTTGGCTCA
ATGCTGTGAGGGCCTCCGGCTGCCTAAACGCGCTGTTTGCTGCCTCTGAA
ATGCCCGACTCTACCCATCAGGAGATCACGCCGCTGCCAGTCCATGAGGA
CTGCCAGGTCATTGCCGCATGCTTGAACCGATCCTTGTCGGACATTTTCC
GAGGCCACACGCGTGCGGTCAAACCCAAGTGCATCGTCACTTTCCTGGAC
GTCACGAGTCCTGCCTTACCCTTTTTGCCCATCCTCCGCGACCCGGTCAG
CCAGTTATACGTGCAACGCCTCTTGAATGGGCTCGGGGGGGTGGCCGAAG
CCAAGGCAGGCGGGGCCCTGGGTGCCTACCTGCGGGGCCCGCCATCTCTC
CACGCGCACTTCTTCCGCCTGGTGCTCTTGTCGACTCCGCCGGACGTGGC
GTTGGACATTTTGAAACGCTACCAAGCGCAACATGGAGCGGTAGCCTTGC
AACCCTTGGGTATGACAGAGGCGTTGCTGCAAGTAGTCATGGCCAGAGGC
CTCTATCGCTTTGCCTATCTGGCCGCCCTGGACATGAATGTGTTGGATAC
CTATCCCGTTATCGAACGAGTGTACAGAGAGGAGAAGATCAAGCAATTGG
TCACGCGGGGGAAATGGCAATTTGCTGTCTTGATGCTGGATCAACTCCGG
CAGCGGACGGCAAGGAAATGGAATGTTGACAAGGATCTATGTGGTCCACG
ACCTAGAGAGGAGAAGGTCGCAGGCTCACATGCAACTCCAGCGTTGTCGG
CGGCAGAGACTTTTGATTTCGAGCTCAGTTGTGTGAAAGGCGCAACTGGA
TGGAAGGAGGCGGATTGCGACAAAGCAGACAACCAGGTGCATGTCACGCA
CCCCTGGATCCCTCGTGACAACACCGTGGAAGTCTTGAGAGATGACAGTG
GCGAGGGCAATTGTATTAACGACGATCAGCTTCCTGCCATTCATCCGTCC
ACCCAAATTACTGGTGCCTCAGAGCCTTCCGAGGCAAGAATTCTGCAATC
TTCAGCGTTCTTGGCTAGTACGCCCGAACTTCAGCTGGAAAAATGCAAAA
GTCTGATACTAAACGCCCTGGTGCCAAAGGCGCGGGTCTTAGGATCACAA
AGCGTCACTCAAGGGGAAAAATGGGACCTGACTTTTCGTCTCGAGCGATT
GTTCACCTACGGGGTAAAAGCGAGCCAGTGTAGACGGGCGCGCAGCCACA
GGAATAAAGAGGCGGGCTGGCTGCTGAAAGAGAGTGTCGACCGTGCCATT
TGGGACGCGCTTGGCACCATCGCGACGGACAAGCAGCAGCCGCCGAAAGC
GCACGAGGAGGAGAAGAAGAAAAAGAAGTTCAAGAAAAAGAAGAAAGACA
AGAAGCTGACTCCTTCCCGACATAGCGGGAGTGACACCACAGTGGTTTCG
GCACTCACCCACGTCTTGGCCCATACCCTCGCGCAGGATCTGGACGCCGC
GTTGGCGAGTCGCGTGAGTGTGCTGGGGTTGATCTGCCTGGTGGAGAGGG
GCCTGACACCGATGTTCCTCTCCCTTTGGCTCAATGCTGTGAGGGCCTCC
GGCTGCCTAAACGCGCTGTTTGCTGCCTCTGAAATGCCCGACTCTACCCA
TCAGGAGATCACGCCGCTGCCAGTCCATGAGGACTGCCAGGTCATTGCCG
CATGCTTGAACCGATCCTTGTCGGACATTTTCCGAGGCCACACGCGTGCG
GTCAAACCCAAGTGCATCGTCACTTTCCTGGACGTCACGAGTCCTGCCTT
ACCCTTTTTGCCCATCCTCCGCGACCCGGTCAGCCAGTTATACGTGCAAC
GCCTCTTGAATGGGCTCGGGGGGGTGGCCGAAGCCAAGGCAGGCGGGGCC
CTGGGTGCCTACCTGCGGGGCCCGCCATCTCTCCACGCGCACTTCTTCCG
CCTGGTGCTCTTGTCGACTCCGCCGGACGTGGCGTTGGACATTTTGAAAC
GCTACCAAGCGCAACATGGAGCGGTAGCCTTGCAACCCTTGGGTATGACA
GAGGCGTTGCTGCAAGTAGTCATGGCCAGAGGCCTCTATCGCTTTGCCTA
TCTGGCCGCCCTGGACATGAATGTGTTGGATACCTATCCCGTTATCGAAC
GAGTGTACAGAGAGGAGAAGATCAAGCAATTGGTCACGCGGGGGAAATGG
CAATTTGCTGTCTTGATGCTGGATCAACTCCGGCAGCGGACGGCAAGGAA
ATGGAATGTTGACAAGGATCTATGTGGTCCACGACCTAGAGAGGAGAAGG
TCGCAGGCTCACATGCAACTCCAGCGTTGTCGGCGGCAGAGACTTTTGAT
TTCGAGCTCAGTTGTGTGAAAGGCGCAACTGGATGGAAGGAGGCGGATTG
CGACAAAGCAGACAACCAGGTGCATGTCACGCACCCCTGGATCCCTCGTG
ACAACACCGTGGAAGTCTTGAGAGATGACAGTGGCGAGGGCAATTGTATT
AACGACGATCAGCTTCCTGCCATTCATCCGTCCACCCAAATTACTGGTGC
CTCAGAGCCTTCCGAGGCAAGAATTCTGCAATCTTCAGCGTTCTTGGCTA
GTACGCCCGAACTTCAGCTGGAAAAATGCAAAAGTCTGATACTAAACGCC
CTGGTGCCAAAGGCGCGGGTCTTAGGATCACAAAGCGTCACTCAAGGGGA
AAAATGGGACCTGACTTTTCGTCTCGAGCGATTGTTCACCTACGGGGTAA
AAGCGAGCCAGTGTAGACGGGCGCGCAGCCACAGGAATAAAGAGGCGGGC
TGGCTGCTGAAAGAGAGTGTCGACCGTGCCATTTGGGACGCGCTTGGCAC
CATCGCGACGGACAAGCAGCAGCCGCCGAAAGCGCACGAGGAGGAGAAGA
AGAAAAAGAAGTTCAAGAAAAAGAAGAAAGACAAGAAGCTGACTCCTTCC
CGACATAGCGGGAGTGACACCACAGTGGTTTCGGCACTCACCCACGTCTT
GGCCCATACCCTCGCGCAGGATCTGGACGCCGCGTTGGCGAGTCGCGTGA
GTGTGCTGGGGTTGATCTGCCTGGTGGAGAGGGGCCTGACACCGATGTTC
CTCTCCCTTTGGCTCAATGCTGTGAGGGCCTCCGGCTGCCTAAACGCGCT
GTTTGCTGCCTCTGAAATGCCCGACTCTACCCATCAGGAGATCACGCCGC
TGCCAGTCCATGAGGACTGCCAGGTCATTGCCGCATGCTTGAACCGATCC
TTGTCGGACATTTTCCGAGGCCACACGCGTGCGGTCAAACCCAAGTGCAT
CGTCACTTTCCTGGACGTCACGAGTCCTGCCTTACCCTTTTTGCCCATCC
TCCGCGACCCGGTCAGCCAGTTATACGTGCAACGCCTCTTGAATGGGCTC
GGGGGGGTGGCCGAAGCCAAGGCAGGCGGGGCCCTGGGTGCCTACCTGCG
GGGCCCGCCATCTCTCCACGCGCACTTCTTCCGCCTGGTGCTCTTGTCGA
CTCCGCCGGACGTGGCGTTGGACATTTTGAAACGCTACCAAGCGCAACAT
GGAGCGGTAGCCTTGCAACCCTTGGGTATGACAGAGGCGTTGCTGCAAGT
AGTCATGGCCAGAGGCCTCTATCGCTTTGCCTATCTGGCCGCCCTGGACA
TGAATGTGTTGGATACCTATCCCGTTATCGAACGAGTGTACAGAGAGGAG
AAGATCAAGCAATTGGTCACGCGGGGGAAATGGCAATTTGCTGTCTTGAT
GCTGGATCAACTCCGGCAGCGGACGGCAAGGAAATGGAATGTTGACAAG back to top
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