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Properties
| Property Name | Value |
|---|
| Product | Transferase |
| Orig transcript id | gnl|cribi|Naga_100116g9.9030.mrna |
| Orig protein id | gnl|cribi|Naga_100116g9.9030 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:852555..854965 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5792 ID=rna5792|Name=rna5792|organism=Nannochloropsis gaditana|type=mRNA|length=816bp
ATGACGCGGGCATCACGCTCCATCGTTTTTCCCAAAGATACGGATAAGAT
CATTTCCTATCAATCTGGTATCGCCTTCCCGAAGTTGCCGGTAAGGCCTG
TTCCGATGGAGACAATGCTCGAACCAACTTCCCGAAATCCCGACGACAAC
GTTATCGTGCCGCACTGTCACTCCTTTCCGTATCTTTACACCAAAATTCG
AGACTGCAAAACTTCAAACAAAGATTTTGCGTTATATGCGTCCCGCATCC
TCAGAATCCTCGCGGAAGAAGCCGTCGGGATGGTTCCGTCATCTCCATGC
TCCATTCAAACACCCACAAATACTACGTACGCGGGCATGCGCGCTCTGGA
CGATGAAAACTCATTATGCGTTGTTTCTATACTCCGCGCGGGAGACGCTC
TCATGGAGGCGGTTCGCAGTGTCGTGCCTCAAGCAGCCGTAGCTAAAATT
TTGATTCAAAGGGATGAAAGCTCCGAAGAAAAATTACCCAAGCTCTTCTA
TTCCAAAATCCCTTCCGATGTGAATTCTCGCTTTTGTATACTCTGTGATC
CAATGCTCGCGACAGGAGGGAGTGCTTTATGTGCATTGAGCATATTAATC
CAGGAAGGGCAGGTTCCACCCGACAACATTATCTTCGTATGCGTAGTCGC
CGCTCCCGAAGGCATCCGGGCAGTTCACACGCGGCACCCAGAAGTGAAAA
TTGTGACAGGCGCTATAGATACGGGACTCAATGAAGACAAGTACATCGTA
CCGGGGTTGGGAGATTTCGGGGATAGGTGGTACAATACAACAGGAGGCGA
AAAGAGCGAGGCATAG back to topprotein sequence of rna5792 >rna5792-protein ID=rna5792-protein|Name=rna5792|organism=Nannochloropsis gaditana|type=polypeptide|length=618bp
MSPRAEGKAEFLLIRKTLIPPATPAPPGPAPRVPLAGCDAIYDHFQVKAA
FFFNEPLNPTLLKVSLAKALDAYPLLAGRARQGSNRDAWIDCCGSGVQVI
EQIARVTGKGGLHHGDTLAFMPRLARGGFKTAVNNAASPILTVTLTEVTY
GESFSCGPRLLSACSCRCNGEDEWEQEAAGTEGAGGGDVERRPPSPSGTP
GGTDGENSLRPTFHASSTTPVPASTPAAPNPGPVIQYALGLSCSHSVGDG
STIAHFLGAWSRASTHLPIQPALNNRDLLLDPGPWGEARLPPPAKFREVS
TWTKARILWRFAWQQGGCETVILRFDKSEVEEIKRQAMKRLHGTEQWVST
SNALAAHLWPIVSALWSRQGESEGGRESDGLVPMSIVVNSRKHLKVPGHY
CGNVVSIQDVPACEASEDLTSRALKIRYASACSEEEAWQDHHYMQWMHSR
GRAGKILYTRMKDMIEGKPGILWDDISSFQSGAMVHLKFGKAVPMGADLL
VLPIPGTMFVVAPPATRGQGEGGKEVRVALTAKMARKLRSSEWQGKVHRY
RPWPMAHASSAMEAKGGGGEGEEARLEEGGEETKFEEKEEVLDGEKKEEE
GREGVTAGQEEKVANEVS back to topmRNA from alignment at CM002466.1:852555..854965+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5792 ID=rna5792|Name=rna5792|organism=Nannochloropsis gaditana|type=mRNA|length=2411bp|location=Sequence derived from alignment at CM002466.1:852555..854965+ (Nannochloropsis gaditana)
GATTGTGATGGAATATGCCCTTTCGATTTTACACTTTCTGGGGCGGTAAA
TGCTCGTCTCTAGCACGTGCCTTTTGGGAAACTTGGTCTTGTAGGGATCA
TATGCGTCATAAATAATGGAAGGACGACAAAATAGGGTGCACTTTGCCTG
AATTTAAGCGTGCACGACCTGTTGCTTGTTGAGTTAGCCTGTTCGTAATC
CTATTGAAGGTATTTACTTTGGGAAAAACGATGGAGCGTGATGCCCGCGT
CATTTTTTTGATGAATAGATTTCTAAGATAGCATTTTTGGAGCTATCGGG
CGTAGCAAGACTGAATGGATTCGGCAAATGTCGCGAACTGAAAACTAATG
GTAAAATCGTGTGGAGCTTCAACCCTGATCCTGTAATTtcgatttcttcc
tcatctGTGACTTGTCACGTATGGTGTCAACTTTAGGCTCATCCTTTCTT
TGGCTTTCAATATTCAGAAGGAGTCAGTTATGTCTCCCCGCGCGGAAGGC
AAGGCAGAATTTCTTCTTATCCGGAAGACCCTCATCCCCCCAGCcactcc
tgccccccctggaCCTGCCCCACGCGTCCCGCTGGCGGGTTGCGATGCGA
TCTACGACCATTTTCAAGTCAAGGcggccttctttttcaatgAGCCTTTG
AACCCCACATTGTTGAAAGTCAGCTTGGCCAAGGCATTGGATGCCTACCC
CCTTCTCGCTGGCCGTGCCCGCCAGGGGAGCAACAGGGACGCGTGGATCG
ATTGTTGCGGCTCAGGGGTGCAAGTCATAGAGCAAATTGCACGGGTgaca
ggcaagggagggttaCACCATGGAGACACCCTAGCATTCATGCCCCGGCT
TGCACGGGGAGGGTTCAAGACTGCTGTGAACAATgccgcctctcccatcc
tcaCCGTCACTCTTACCGAGGTCACGTACGGAGAATCCTTCTCGTGCGGT
CCACGACTCTTGTCGGCATGCTCGTGTCGATGCAATGGGGAGGACGAATG
GGAgcaggaagcggcggggacggagggggccgggggtggggacgTGGAAC
GCCGTCCACCATCCCCTTCGGGAACCCCAGGCGGGACCGACGGTGAGAAC
TCACTCCGCCCCACCTTTCACGCCTCCAGCACTACACCTGTCCCTGCGTC
TACCCCTGCGGCTCCCAACCCCGGGCCCGTTATCCAGTACGCTTTGGGCT
TGTCCTGCTCCCACTCGGTCGGGGACGGGAGCACCATCGCCCATTTCCTC
GGCGCCTGGTCGCGAGCCAGTACCCATCTCCCCATCCAGCCCGCGTTGAA
TAACCGGGACCTTCTCTTAGATCCCGGCCCCTGGGGGGAAGCACGTCTGC
CGCCGCCGGCAAAATTCCGCGAAGTCTCGACATGGACCAAAGCCCGTATC
TTGTGGCGTTTTGCCTGGCAGCAGGGCGGATGCGAGACGGTCATCCTGCG
ATTCGACAAgtcggaggtggaggaaatcAAGAGGCAGGCGATGAAACGCT
TGCATGGGACGGAGCAATGGGTGTCTACCTCGAACGCGTTGGCGGCACAT
CTGTGGCCCATCGTCTCGGCGCTCTGGTcgcggcagggggaaagcgaggg
agggcgggagtcGGATGGGCTGGTCCCGATGAGCATCGTGGTGAATTCCC
GGAAGCACTTAAAGGTACCCGGACATTATTGTGGAAACGTGGTGTCAATC
CAGGACGTGCCTGCCTGCGAGGCCTCCGAGGACTTGACCTCCCGGGCGTT
GAAGATCCGTTACGCCTCGGCGTGctcggaagaagaagcatggCAAGACC
ACCACTACATGCAATGGATGCACAGCCGGGGTCGGGCAGGGAAAATCCTG
TACACGCGGATGAAAGACATGATCGAGGGGAAGCCGGGTATCCTTTGGGA
CgacatttcttcttttcaatCGGGTGCCATGGTCCACTTGAAGTTTGGCA
AGGCAGTGCCTATGGGCGCGGATTTGCTGGTTCTTCCCATTCCAGGAACC
ATGTTTGtggtcgccccccccgccacgaggggacaaggggaaggtggaaa
ggaagTGCGCGTGGCGTTAACAgccaaaatggcgcgaaaattGAGAAGCA
GCGAGTGGCAAGGGAAGGTGCATCGGTATCGACCATGGCCGATGGCACAT
GCGTCGTCGGCGATGGAAGCcaaagggggaggcggggagggagaagaggc
acgattggaagaaggaggggaggagacaaaatttgaggagaaggaggagg
tactggacggggagaagaaagaagaggaaggtagggaagggGTAACGGCA
GgtcaggaagagaaggtagCCAACGAGGTGTCTTAACGGGGACGAACCGA
AGTGCTTTCAAAAGGAGAGGACTCATGCTCAACAAAAAGAGTACATGTGC
GCCGCGATGTG back to topCoding sequence (CDS) from alignment at CM002466.1:852555..854965+ >rna5792 ID=rna5792|Name=rna5792|organism=Nannochloropsis gaditana|type=CDS|length=1857bp|location=Sequence derived from alignment at CM002466.1:852555..854965+ (Nannochloropsis gaditana)
ATGTCTCCCCGCGCGGAAGGCAAGGCAGAATTTCTTCTTATCCGGAAGAC
CCTCATCCCCCCAGCcactcctgccccccctggaCCTGCCCCACGCGTCC
CGCTGGCGGGTTGCGATGCGATCTACGACCATTTTCAAGTCAAGGcggcc
ttctttttcaatgAGCCTTTGAACCCCACATTGTTGAAAGTCAGCTTGGC
CAAGGCATTGGATGCCTACCCCCTTCTCGCTGGCCGTGCCCGCCAGGGGA
GCAACAGGGACGCGTGGATCGATTGTTGCGGCTCAGGGGTGCAAGTCATA
GAGCAAATTGCACGGGTgacaggcaagggagggttaCACCATGGAGACAC
CCTAGCATTCATGCCCCGGCTTGCACGGGGAGGGTTCAAGACTGCTGTGA
ACAATgccgcctctcccatcctcaCCGTCACTCTTACCGAGGTCACGTAC
GGAGAATCCTTCTCGTGCGGTCCACGACTCTTGTCGGCATGCTCGTGTCG
ATGCAATGGGGAGGACGAATGGGAgcaggaagcggcggggacggaggggg
ccgggggtggggacgTGGAACGCCGTCCACCATCCCCTTCGGGAACCCCA
GGCGGGACCGACGGTGAGAACTCACTCCGCCCCACCTTTCACGCCTCCAG
CACTACACCTGTCCCTGCGTCTACCCCTGCGGCTCCCAACCCCGGGCCCG
TTATCCAGTACGCTTTGGGCTTGTCCTGCTCCCACTCGGTCGGGGACGGG
AGCACCATCGCCCATTTCCTCGGCGCCTGGTCGCGAGCCAGTACCCATCT
CCCCATCCAGCCCGCGTTGAATAACCGGGACCTTCTCTTAGATCCCGGCC
CCTGGGGGGAAGCACGTCTGCCGCCGCCGGCAAAATTCCGCGAAGTCTCG
ACATGGACCAAAGCCCGTATCTTGTGGCGTTTTGCCTGGCAGCAGGGCGG
ATGCGAGACGGTCATCCTGCGATTCGACAAgtcggaggtggaggaaatcA
AGAGGCAGGCGATGAAACGCTTGCATGGGACGGAGCAATGGGTGTCTACC
TCGAACGCGTTGGCGGCACATCTGTGGCCCATCGTCTCGGCGCTCTGGTc
gcggcagggggaaagcgagggagggcgggagtcGGATGGGCTGGTCCCGA
TGAGCATCGTGGTGAATTCCCGGAAGCACTTAAAGGTACCCGGACATTAT
TGTGGAAACGTGGTGTCAATCCAGGACGTGCCTGCCTGCGAGGCCTCCGA
GGACTTGACCTCCCGGGCGTTGAAGATCCGTTACGCCTCGGCGTGctcgg
aagaagaagcatggCAAGACCACCACTACATGCAATGGATGCACAGCCGG
GGTCGGGCAGGGAAAATCCTGTACACGCGGATGAAAGACATGATCGAGGG
GAAGCCGGGTATCCTTTGGGACgacatttcttcttttcaatCGGGTGCCA
TGGTCCACTTGAAGTTTGGCAAGGCAGTGCCTATGGGCGCGGATTTGCTG
GTTCTTCCCATTCCAGGAACCATGTTTGtggtcgccccccccgccacgag
gggacaaggggaaggtggaaaggaagTGCGCGTGGCGTTAACAgccaaaa
tggcgcgaaaattGAGAAGCAGCGAGTGGCAAGGGAAGGTGCATCGGTAT
CGACCATGGCCGATGGCACATGCGTCGTCGGCGATGGAAGCcaaaggggg
aggcggggagggagaagaggcacgattggaagaaggaggggaggagacaa
aatttgaggagaaggaggaggtactggacggggagaagaaagaagaggaa
ggtagggaagggGTAACGGCAGgtcaggaagagaaggtagCCAACGAGGT
GTCTTAA back to top
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