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Properties
| Property Name | Value |
|---|
| Product | thioredoxin |
| Orig transcript id | gnl|cribi|Naga_100092g15.2135.mrna |
| Orig protein id | gnl|cribi|Naga_100092g15.2135 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:815631..819099 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5775 ID=rna5775|Name=rna5775|organism=Nannochloropsis gaditana|type=mRNA|length=1530bp
TTTGTTCAAGTGCTAGCTGCAAAAGGCATCCAGTCATTGGAAATGCTTGG
AAAGCCGGATACCTACGTGGTGATACGGTATGGAGGCGATGAGCACCGGA
CAAAGGAAGTGGAGGATTGCGAGGACCCTGTATATGACGACATGTGGGTG
TCCACCGCAGGCATGGCTCGAAACGATATGGTCGAAATAACAGTCATGGA
AAAATACAATGTCAAGGATGAGGAGCTCGGTAGCCTTACATTCCCCGCCG
ACTCCTTCGCTCATAATGTCCTGGAGGCCTCCTGGTTCGAACTGGAACGC
GACGGCGAAGTGTGTGGAGAAATCTGCCTGGCAGCCCGATTTGCCCCCAT
CCTAACGAGTGGATTGGGCGGGGCGGGAAACCGGAGTGGCCACGGCGCTG
TCTCTGGCGACGGTCCGCTGGAGCAAGTAGCGCAATATTTCTCGGGCCCA
CGGCCTTGGTACATGCGGGGGGGATTCTACTACGATTTGAGCAAGCGGGT
GTACAGACGGGTCAAGCACCTGCCCATGCTCGGCCTGGGCCCGGCGGTGG
GAGAGTGCGTGGTCGAGAGGGTGTTGAGCCGTGTCATCTCCGTGCCCGCC
GCGGGCGACGCGCCCCTCGTCTCGAATCTCTCCCGCCTGGATCACGTGGT
GGCGGGCCTGATCTCGACGATCGACATGGGAATCGACCAAACCAAGGACC
AGATGCTTCAGTCTGCGCTCAGTCTGAAGAAGAAGATGACGGGCAAGGCG
CCCTCTGGGGGGGCCTTGGAGGACAGGGAGGGACGAGAGCCAGCTTCGGC
GGCCAAGAAGAACAGCGGGATCATTTGGAGCTTGGTGGAAGGCACCGTCA
CACACGTGGCGAAGCCGGTGGCGAGTTATGTTCCGATCGTGGGGGGGTTG
GGCGTGCGGGTCCTGGATTTTATCGTGCCTCCGCCCCCCGCGGCCGAGAC
AGCTTCTGTCGTGGAATCGTTGGCCCCTGCTGCGTGTGTGGGAGAGAAGA
GCACCTCCCCCTTGGCCAGGAAAGGCGGGTATACCTCGGCGTTTGACGCG
CCTTCCAAGGTGAATGCGGCTTCCGCCTCGGGGTATTAACCAGGGCCCTT
TTCAGGGTAAGCTCCTCTCTTCACCTTGCCTGTTCTGTCGGTCCTACATG
CTTCCTATTCTCAAGGAAAGTGAGCCATTCCATGATAACGCTTTTCACAA
CTGTGATTGCAGATTAGCCCGGTACAAAAGTCGATGACACTGATCCCTTT
GCACTGCTTTCCCATCGCGTCAGCCAAGGTTCAGCCTGTCGTATATACGT
TTTTCAGCGGCTGATATGAACCAACATAAGGATAACGACGGAAATTTGAA
GATGGGAGGGGGAGAGATGGAGGAAAGGACGATTTGGCGTAACGGAGACG
GCTAAGGCTAGTTCCAGACGGTGTTCACTCGAGCTCAAACACTTTACATA
TAAAAATCAGCGTGCGCAGGCGAGCAAGGTTGTTTTTCTCACAAGAATTG
GAAAGAAATGACATTGGAAGTCGTGAGTCG back to topprotein sequence of rna5775 >rna5775-protein ID=rna5775-protein|Name=rna5775|organism=Nannochloropsis gaditana|type=polypeptide|length=1122bp
MVFEASSSTCKTRSQRRMAPTLLFQIMMVFSCLWPTASVVGSKAPFLPRP
LEFWGHQASSGHSIPFWGIRGGANGPKGTFQTSDHIPAAPRDDRPRSPRQ
DRSGDEIDHNAKHFDHQSSKTSASPSVQGVQANSIPSNPPGMVCDGDVCH
LPDAKHYAPSPVTAPAYTDKPHADYFSMQVQEFVEKGHTAAEAEKALHEA
RYDVAVAAAILEGRRPSVGKATSESHTILEREQRTPPTENTAVETSPTDS
FRAGPVVGESPPPPPSVPPSVPSPATPTTPTPSIPDEAPAPLHSLEVSPE
AATPSPGTVSASPTPSSPPPPPEAPPTPAPAPSPAPEEDTAIPPAYVDGV
NALIGKGLSREDALELLTLAKGDLPTALEILDQDAMARDLEAAVEEMVGE
GWDEDVARQALLAQREKTKDLPPPAPVAGTASPSRGPPSGPLQPPPPPTK
PATKKPATTPPVPPAAHADVVFEVTESDLQKIVIESPVPVLLDVYAEWCG
PCKQLGPMLEAMAVKAGGLFRLAKVDSDKNRGISEMLGVQALPSVFAFRD
GALVDNFVGMPQQATLQAFMTRLLMRSPRPPVDPLKDPHAKTAEDLEKMG
SKLAHLAGLAAFGAARKEKLERAVDALVTETVRAGEEGKEGRDPASALQA
LRTVNAYLSNLIKHFSGDPKYRHINMEREAFQNRLGAYPAAIRILEKVGF
NDEGGKGTLVLGHRNRAPVIAAEQVIGGYLSRVRRGGAGSTGGAAGASGE
TMPIFRSKSLRRPPPAPAAPVAKAASGGGEKGPTQAPSSAVSPKATAPSP
PSSNSGLSRKAFTALAVRMPDGSIFKPGLRANATLSKLMAALRAERPKET
GQVPVGGLKVVTRVPVLRTYVEGGPESGKKLGDLELGGGKVVLTLVVTRP
EEGLKEGGKEGKRKVVSADVLAAKAKMKKDKPRRGGTHTLFSEGHLDEAQ
TKGNRYYGGGSTYFEAAIDEEAEKGEKEGTVTEGKGVGKGKKGGVENRRG
KGEETSDVGGEGQEEQDKDKKEDLEKEVFNDDEEEEEEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEDEEDELEEEEKDDEEDEEEEEEEDDEDDDDEEE
EDEEGDEEDEDDEEEDGEEEDD back to topmRNA from alignment at CM002466.1:815631..819099- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5775 ID=rna5775|Name=rna5775|organism=Nannochloropsis gaditana|type=mRNA|length=3469bp|location=Sequence derived from alignment at CM002466.1:815631..819099- (Nannochloropsis gaditana)
TAGGCCTCTCATTGATAAGAGCCTGGATACGGAGGGGAAATGGTTTTTGA
AGCTTCGTCAAGTACTTGTAAGACACGTTCCCAACGTAGGATGGCGCCCA
CCTTACTCTTTCAGATTATGATGGTTTTCTCATGCCTGTGGCCTACCGCA
AGCGTTGTTGGGAGCAAAGCGCCTTTTCTTCCGAGGCCCTTGGAATTTTG
GGGCCACCAGGCTTCTTCTGGACACTCTATTCCTTTTTGGGGAATCCGAG
GCGGTGCAAATGGACCGAAAGGCACTTTTCAAACGAGTGACCATATCCCT
GCTGCCCCACGAGACGACCGTCCTCGTTCACCAAGACAAGACAGAAGCGG
CGACGAAATTGACCACAACGCGAAGCATTTTGATCATCAAAGCTCTAAAA
CTAGTGCGTCCCCCTCGGTCCAGGGCGTGCAGGCAAACTCCATCCCCTCC
AACCCTCCGGGCATGGTGTGCGATGGAGACGTCTGCCACCTGCCTGACGC
AAAGCACTATGCTCCCTCTCCCGTCACAGCACCCGCTTACACTGATAAAC
CACACGCGGATTACTTTTCGATGCAAGTGCAGGAATTTGTGGAGAAGGGG
CACACGGCAGCGGAGGCGGAGAAAGCTTTGCACGAAGCCCGGTACGATGT
GGCTGTCGCGGCGGCGATACTGGAAGGAAGGAGGCCGTCCGTGGGGAAGG
CAACCTCCGAGTCGCATACTATCCTCGAGAGGGAGCAAAGGACGCCACCA
ACAGAAAATACCGCCGTGGAAACGTCCCCTACCGATTCATTCCGTGCGGG
CCCAGTGGTAGGGGAGTCGCCCCCCCCCCCCCCCTCCGTCCCTCCTTCGG
TACCCTCGCCTGCCACCCCCACCACCCCCACTCCCTCCATTCCCGATGAA
GCACCAGCGCCTCTGCATTCTCTGGAGGTCAGTCCAGAAGCCGCCACTCC
TTCTCCAGGCACGGTCTCCGCCTCCCCCACTCCTTCTTCGCCCCCCCCTC
CCCCCGAGGCACCTCCCACTCCCGCCCCCGCCCCCTCCCCTGCTCCAGAA
GAAGACACCGCCATCCCCCCCGCCTACGTGGACGGCGTGAATGCCCTGAT
TGGCAAAGGGCTGAGTCGGGAGGATGCCCTCGAGCTTCTGACTCTGGCTA
AGGGGGATCTCCCCACTGCCTTGGAGATCCTCGACCAGGACGCGATGGCC
AGGGACCTGGAGGCGGCTGTGGAGGAGATGGTGGGGGAAGGGTGGGACGA
GGACGTGGCGCGGCAGGCCCTCTTGGCGCAGCGGGAGAAGACCAAAGACC
TCCCTCCCCCGGCCCCTGTGGCGGGAACAGCCTCCCCCTCTCGGGGCCCT
CCCTCCGGTCCACTGCAGCCGCCACCCCCACCGACAAAGCCGGCCACCAA
GAAGCCGGCGACAACCCCCCCCGTTCCCCCCGCGGCGCACGCGGACGTGG
TCTTCGAAGTGACCGAGAGCGACCTGCAAAAGATCGTGATCGAGTCGCCC
GTGCCCGTCCTCCTGGATGTGTACGCAGAATGGTGCGGCCCCTGCAAACA
GCTGGGGCCCATGCTGGAAGCCATGGCCGTGAAGGCCGGAGGCTTGTTCC
GGCTCGCCAAGGTGGATTCGGACAAGAACCGAGGGATCAGCGAGATGCTC
GGCGTGCAGGCGCTCCCCTCGGTCTTTGCCTTCAGGGACGGGGCCCTCGT
CGACAACTTCGTCGGTATGCCCCAGCAAGCCACCCTGCAGGCATTCATGA
CGCGCCTCTTGATGCGAAGCCCCCGACCGCCCGTCGACCCCTTGAAAGAC
CCGCACGCCAAGACCGCGGAGGATTTGGAGAAAATGGGGAGCAAGCTGGC
GCATTTGGCAGGCCTGGCCGCTTTTGGGGCGGCTCGGAAGGAAAAACTAG
AACGGGCCGTGGACGCTTTGGTGACCGAGACTGTACGGGCAGGGGAGGAA
GGGAAGGAGGGACGGGACCCGGCGTCGGCGCTGCAGGCCCTGCGAACCGT
CAATGCCTACCTGAGCAATTTGATCAAGCACTTCAGCGGAGACCCCAAAT
ACCGGCACATCAACATGGAAAGGGAAGCGTTCCAAAACCGGTTGGGCGCC
TACCCCGCCGCGATTCGGATACTGGAGAAGGTGGGTTTCAACGACGAGGG
AGGCAAAGGCACGTTGGTCCTCGGGCATCGGAACCGAGCGCCTGTGATCG
CTGCCGAGCAGGTCATCGGAGGCTACCTGTCCCGGGTTCGGCGCGGCGGG
GCCGGCTCCACAGGCGGGGCTGCCGGCGCCAGTGGAGAGACCATGCCCAT
TTTCAGGAGCAAGTCTTTGCGACGGCCGCCTCCTGCCCCGGCTGCTCCTG
TGGCCAAGGCAGCCTCGGGCGGGGGGGAGAAGGGCCCGACGCAAGCCCCG
TCCTCGGCGGTCTCCCCGAAAGCCACAGCCCCTTCGCCCCCGTCGTCGAA
TTCAGGGTTGTCCCGGAAGGCTTTCACCGCCTTAGCCGTTCGGATGCCCG
ACGGGAGCATCTTCAAGCCGGGCCTGCGCGCGAACGCGACGCTGTCCAAG
CTGATGGCGGCCTTGCGGGCGGAGAGGCCCAAAGAAACGGGGCAAGTGCC
CGTGGGAGGGTTGAAGGTGGTGACGCGCGTGCCCGTTCTGAGGACCTACG
TGGAAGGAGGCCCCGAATCCGGGAAAAAATTGGGGGATTTGGAGCTTGGA
GGGGGGAAGGTAGTCCTTACTTTGGTGGTGACGAGGCCTGAGGAGGGATT
GAAGGAGGGAGGGAAGGAGGGAAAGCGGAAGGTAGTGTCCGCAGATGTTT
TGGCTGCAAAAGCAAAGATGAAGAAAGACAAGCCACGCCGAGGAGGAACG
CACACCTTGTTCTCGGAGGGGCACCTGGATGAAGCGCAGACGAAAGGGAA
CAGGTACTACGGGGGTGGATCGACGTATTTTGAGGCGGCGATAGACGAAG
AGGCAGAGAAGGGAGAGAAGGAAGGGACGGTAACGGAGGGGAAAGGCGTA
GGAAAAGGGAAGAAGGGAGGTGTTGAGAACAGAAGAGGGAAGGGCGAGGA
GACCAGTGACGTTGGCGGCGAGGGACAGGAAGAACAGGATAAGGATAAAA
AGGAGGACCTTGAGAAAGAGGTGTTTAATGACGACGAGGAGGAGGAAGAA
GAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGA
GGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGACGAAGAGG
ATGAGCTGGAGGAAGAGGAGAAGGACGACGAGGAGGACGAGGAAGAGGAG
GAAGAGGAGGACGACGAGGATGATGATGATGAGGAGGAGGAGGATGAAGA
GGGCGATGAGGAGGATGAGGACGATGAGGAGGAGGATGGGGAGGAGGAGG
ACGATTAGGGATGATCCAGTCCTATTCTCACGGACACGAAAAAGTACCAA
GCAAGCAAAGCGGCAAGAA back to topCoding sequence (CDS) from alignment at CM002466.1:815631..819099- >rna5775 ID=rna5775|Name=rna5775|organism=Nannochloropsis gaditana|type=CDS|length=3369bp|location=Sequence derived from alignment at CM002466.1:815631..819099- (Nannochloropsis gaditana)
ATGGTTTTTGAAGCTTCGTCAAGTACTTGTAAGACACGTTCCCAACGTAG
GATGGCGCCCACCTTACTCTTTCAGATTATGATGGTTTTCTCATGCCTGT
GGCCTACCGCAAGCGTTGTTGGGAGCAAAGCGCCTTTTCTTCCGAGGCCC
TTGGAATTTTGGGGCCACCAGGCTTCTTCTGGACACTCTATTCCTTTTTG
GGGAATCCGAGGCGGTGCAAATGGACCGAAAGGCACTTTTCAAACGAGTG
ACCATATCCCTGCTGCCCCACGAGACGACCGTCCTCGTTCACCAAGACAA
GACAGAAGCGGCGACGAAATTGACCACAACGCGAAGCATTTTGATCATCA
AAGCTCTAAAACTAGTGCGTCCCCCTCGGTCCAGGGCGTGCAGGCAAACT
CCATCCCCTCCAACCCTCCGGGCATGGTGTGCGATGGAGACGTCTGCCAC
CTGCCTGACGCAAAGCACTATGCTCCCTCTCCCGTCACAGCACCCGCTTA
CACTGATAAACCACACGCGGATTACTTTTCGATGCAAGTGCAGGAATTTG
TGGAGAAGGGGCACACGGCAGCGGAGGCGGAGAAAGCTTTGCACGAAGCC
CGGTACGATGTGGCTGTCGCGGCGGCGATACTGGAAGGAAGGAGGCCGTC
CGTGGGGAAGGCAACCTCCGAGTCGCATACTATCCTCGAGAGGGAGCAAA
GGACGCCACCAACAGAAAATACCGCCGTGGAAACGTCCCCTACCGATTCA
TTCCGTGCGGGCCCAGTGGTAGGGGAGTCGCCCCCCCCCCCCCCCTCCGT
CCCTCCTTCGGTACCCTCGCCTGCCACCCCCACCACCCCCACTCCCTCCA
TTCCCGATGAAGCACCAGCGCCTCTGCATTCTCTGGAGGTCAGTCCAGAA
GCCGCCACTCCTTCTCCAGGCACGGTCTCCGCCTCCCCCACTCCTTCTTC
GCCCCCCCCTCCCCCCGAGGCACCTCCCACTCCCGCCCCCGCCCCCTCCC
CTGCTCCAGAAGAAGACACCGCCATCCCCCCCGCCTACGTGGACGGCGTG
AATGCCCTGATTGGCAAAGGGCTGAGTCGGGAGGATGCCCTCGAGCTTCT
GACTCTGGCTAAGGGGGATCTCCCCACTGCCTTGGAGATCCTCGACCAGG
ACGCGATGGCCAGGGACCTGGAGGCGGCTGTGGAGGAGATGGTGGGGGAA
GGGTGGGACGAGGACGTGGCGCGGCAGGCCCTCTTGGCGCAGCGGGAGAA
GACCAAAGACCTCCCTCCCCCGGCCCCTGTGGCGGGAACAGCCTCCCCCT
CTCGGGGCCCTCCCTCCGGTCCACTGCAGCCGCCACCCCCACCGACAAAG
CCGGCCACCAAGAAGCCGGCGACAACCCCCCCCGTTCCCCCCGCGGCGCA
CGCGGACGTGGTCTTCGAAGTGACCGAGAGCGACCTGCAAAAGATCGTGA
TCGAGTCGCCCGTGCCCGTCCTCCTGGATGTGTACGCAGAATGGTGCGGC
CCCTGCAAACAGCTGGGGCCCATGCTGGAAGCCATGGCCGTGAAGGCCGG
AGGCTTGTTCCGGCTCGCCAAGGTGGATTCGGACAAGAACCGAGGGATCA
GCGAGATGCTCGGCGTGCAGGCGCTCCCCTCGGTCTTTGCCTTCAGGGAC
GGGGCCCTCGTCGACAACTTCGTCGGTATGCCCCAGCAAGCCACCCTGCA
GGCATTCATGACGCGCCTCTTGATGCGAAGCCCCCGACCGCCCGTCGACC
CCTTGAAAGACCCGCACGCCAAGACCGCGGAGGATTTGGAGAAAATGGGG
AGCAAGCTGGCGCATTTGGCAGGCCTGGCCGCTTTTGGGGCGGCTCGGAA
GGAAAAACTAGAACGGGCCGTGGACGCTTTGGTGACCGAGACTGTACGGG
CAGGGGAGGAAGGGAAGGAGGGACGGGACCCGGCGTCGGCGCTGCAGGCC
CTGCGAACCGTCAATGCCTACCTGAGCAATTTGATCAAGCACTTCAGCGG
AGACCCCAAATACCGGCACATCAACATGGAAAGGGAAGCGTTCCAAAACC
GGTTGGGCGCCTACCCCGCCGCGATTCGGATACTGGAGAAGGTGGGTTTC
AACGACGAGGGAGGCAAAGGCACGTTGGTCCTCGGGCATCGGAACCGAGC
GCCTGTGATCGCTGCCGAGCAGGTCATCGGAGGCTACCTGTCCCGGGTTC
GGCGCGGCGGGGCCGGCTCCACAGGCGGGGCTGCCGGCGCCAGTGGAGAG
ACCATGCCCATTTTCAGGAGCAAGTCTTTGCGACGGCCGCCTCCTGCCCC
GGCTGCTCCTGTGGCCAAGGCAGCCTCGGGCGGGGGGGAGAAGGGCCCGA
CGCAAGCCCCGTCCTCGGCGGTCTCCCCGAAAGCCACAGCCCCTTCGCCC
CCGTCGTCGAATTCAGGGTTGTCCCGGAAGGCTTTCACCGCCTTAGCCGT
TCGGATGCCCGACGGGAGCATCTTCAAGCCGGGCCTGCGCGCGAACGCGA
CGCTGTCCAAGCTGATGGCGGCCTTGCGGGCGGAGAGGCCCAAAGAAACG
GGGCAAGTGCCCGTGGGAGGGTTGAAGGTGGTGACGCGCGTGCCCGTTCT
GAGGACCTACGTGGAAGGAGGCCCCGAATCCGGGAAAAAATTGGGGGATT
TGGAGCTTGGAGGGGGGAAGGTAGTCCTTACTTTGGTGGTGACGAGGCCT
GAGGAGGGATTGAAGGAGGGAGGGAAGGAGGGAAAGCGGAAGGTAGTGTC
CGCAGATGTTTTGGCTGCAAAAGCAAAGATGAAGAAAGACAAGCCACGCC
GAGGAGGAACGCACACCTTGTTCTCGGAGGGGCACCTGGATGAAGCGCAG
ACGAAAGGGAACAGGTACTACGGGGGTGGATCGACGTATTTTGAGGCGGC
GATAGACGAAGAGGCAGAGAAGGGAGAGAAGGAAGGGACGGTAACGGAGG
GGAAAGGCGTAGGAAAAGGGAAGAAGGGAGGTGTTGAGAACAGAAGAGGG
AAGGGCGAGGAGACCAGTGACGTTGGCGGCGAGGGACAGGAAGAACAGGA
TAAGGATAAAAAGGAGGACCTTGAGAAAGAGGTGTTTAATGACGACGAGG
AGGAGGAAGAAGAGGAGGAAGAGGAGGAGGAAGAGGAGGAGGAGGAGGAG
GAGGAAGAAGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
AGACGAAGAGGATGAGCTGGAGGAAGAGGAGAAGGACGACGAGGAGGACG
AGGAAGAGGAGGAAGAGGAGGACGACGAGGATGATGATGATGAGGAGGAG
GAGGATGAAGAGGGCGATGAGGAGGATGAGGACGATGAGGAGGAGGATGG
GGAGGAGGAGGACGATTAG back to top
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