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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100092g11.2148.mrna |
| Orig protein id | gnl|cribi|Naga_100092g11.2148 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:804840..806044 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5772 ID=rna5772|Name=rna5772|organism=Nannochloropsis gaditana|type=mRNA|length=1811bp
CACAGGGTTTCCAGGTTCATAAGCACGTATACTACATAGCATATATGTCA
TGACTGTGGAGCAGGTTGATGTGCACAATGTGGAAAACAACCGCTACATC
ATTATCGGAGCCGGTCCCGTGGGACTGTTAGCAGCCATTCTTCTCGTTCA
AGAAAAGCATGCAGCTCAGGTATCCATTTATGAGGCTCGAGATGGCCTAA
CGACTGACCTTCATGAGAGCTATCCCATTGGCGTAAATCCTCGAGGATCC
CGTGCCTTGGACCGCGCCCGACCTGATATGGCGATTGCATTGCGCATGCG
CTCCTCGATGATTGACGCTTGGAGGATATATGCGGGCAGCCGAATGGTGG
CGGAGGTACCATCAGGCTTGGTGGTGGGAACGACGCGGAGCACGATCAAT
GAAATTTTGTATGAAGAAGTCTGCAAGCATTTTCAAGAACAGATTAAGAT
CCTCTGGAGCCATCGTCTGAAAACTTTGGACATCCTGGAACGAAGCTTGA
TATTCGATGTAAAGCGCCCACGGGCCGACGAAGAGCTAGCACAGACATAT
GAAGAAGTGACTGTGCAGGGTGGAGGGGCGCGGGTACTGGCTTGCGATGG
AGTCTGGAGCGTGGTCCGTGGCTTCGCGGAGAAGCACGTGGAGGGTTTTA
CCAGTAATGTCTCACCATGGAGGGTCCAGTTCCGTCTCCTGTTTTCCAAG
CCTGGAGCGGGTAAGCTGGTCCCGGAATTAGAGCCCCGGTACCATTACGT
GATGGGCGGTATTTACCTCTCCATCATCGAGGAGGACGTCTGGGTCTTGG
GCTTGGGCATTGGCGAGCATCTCCCACGCCAGACGAGAGAGCTCCTGACA
GCCACGGTCGCCACACCGGAAAGAATCGCAGCCTTGCGGGCGTATGTAAC
AAAGAAGGCACCATTGGCTGCCCCATTCCTGACCGCAGAGGATTTGGAAT
TATATTTTACCAGGAAGACGTTCGGAGGGGCAATGGTTAAAGTCAGCCAG
CTGAACATAGGGGAATGGGCGGTCCTTCTCGGGGGTAAGCCTCTATGAAT
TCTGCCGTTTTAGCTTCGGAGAGACTTCACTAAAAGAGATTTGTGTGCAA
AGGGGAGGGATGTGTTTCAATTGTGATTGGGTGCGGGCGGTGTTCTATTG
AAAGGGGATGTGCTTTTTCTCACACATCTTGCCTCCCTCGTTCATCTCTT
TTACATTGTATCAGATGCGGCGCATTCTGTCATCCCACCTACGGGCGAAG
GCTTCAACTCCGGCGCCGAAGACGTGGAGATATTAATGGAAGCTTTGCGC
CTTACTCCGGCACAGCCCTTTAGAGCTTTCAACGAAATGCGTTTGCCGGA
TTTACATGCGTTGCACAACCTCGCTGTCGATGCGAACGAGAGCAATTTTG
GCAAATTTGGACCCGAGAAAGTGAGTCGGTTGCTTGCCACTGTCCTGGTC
GCTCTCGCGAAAAGGGTTGGAATCTTCTCGCACACCTGGGAAGATTTAAG
TTTTGGTGCGGACGCGTCCCCGCCTAAAACATACATAGAGATTGCAAGTG
TCTGGAGATGGCAGCGCATCTTTATCCTGCCTTTGTCCAGATTAGCCATT
TGGCCCATATTCTTGCTCGTTTGGTTGCTCCTCTCGCCTTTCCGTGCCAT
TTTCTGGGTGGTTAGGAGGCCGTATCGCAAAGTTGAGAGGGAAGAGGGTA
GCAAAAGTAGCTTCGGAGGACGATCGAAAGCAAAGCGGATATAATAACTA
AAAGTATGTTTCTCAAAATAACGCATGTAAAGAAAACCATTTTACGTTGT
TGGCATGATGT back to topprotein sequence of rna5772 >rna5772-protein ID=rna5772-protein|Name=rna5772|organism=Nannochloropsis gaditana|type=polypeptide|length=255bp
MTGLFRHFSVCLYLAVLCHSVSTAFAFAPLCKSPLSATMGGTVRKGTIQT
TRMMAERFYNKWSRADFVLKSALAAAGIIPVVKGGAVASKIKAEHSAPVK
TNKKHSDEKDDEEKSTPLAFSTGVPLRYPLHKSQYEARRELQDVVARVGG
RLTDFRGTKAGLFRATFDLHRLQELHFEFGGDGGSSGYSRVLQAHVGAGV
DDMRLINALADGLASKGWLTAGFPLSCDPAMAQYLRHRNEGRCTSRGRAM
SKAPC back to topmRNA from alignment at CM002466.1:804840..806044+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5772 ID=rna5772|Name=rna5772|organism=Nannochloropsis gaditana|type=mRNA|length=1205bp|location=Sequence derived from alignment at CM002466.1:804840..806044+ (Nannochloropsis gaditana)
ATGACAGGCCTATTTCGCCATTTCTCAGTATGCCTGTATTTAGCTGTGCT
TTGCCACTCGGTTAGCACTGCATTTGCCTTCGCACCTCTATGCAAGTCTC
CTCTTAGCGCTACCATGGGCGGCACTGTTCGCAAAGGCACCATTCAGACG
ACACGCATGATGGCAGAACGATTCTACAACAAATGGAGTCGGGCGGATTT
TGTGCTGAAAAGCGCGCTAGCCGCGGTACGTGATAAGGGTTGACGAATAT
TGGAATCTGACAACGTAGCAAACTGAAGTACCCTACGCTTTACTTGTTGG
CATTCCTCCAACATCCTGCCATGTCAATTTTAGGCGGGAATTATCCCAGT
CGTCAAAGGAGGAGCGGTGGCAAGCAAAATCAAGGCGGAACACAGTGCCC
CTGTCAAGACTAACAAGTAAGTgggagggtgagaaggaggaaggataaag
aagaggaatgaaaaaggagaggaggaacgatgaagaagaggagtaaggat
aaagaggaagagatagGCCACTTATGAACGAGAACATCATATGAGCGAAA
AGAGAATTTGACTGCAGAGTAGAGGTTTAGTGGTCGTGTCATAAGGCAGT
GCCGAGGTTGAAGCAGGAGGAACTATGAACATATTAGAATTTGCGCGAAA
TAAAACCTGTGCATCTcacgtcctctttcccacgaTATCAGAAAGCATTC
GGATGagaaggatgacgaggagaagTCGACACCTCTCGCCTTTTCAACAG
GTGTACCCCTCCGTTATCCCTTGCACAAAAGCCAGTACGAGGCTCGCCGT
GAGCTGCAAGATGTTGTAGCCCGGGTCGGAGGACGCTTGACGGATTTTCG
CGGCACCAAAGCTGGTCTTTTTCGTGCTACCTTTGAccttcatcgcctcc
aagAGTTACACTTTGAATttggtggtgatggagggAGTAGCGGGTACAGC
CGTGTGTTGCAAGCACATGTAGGAGCGGGCGTTGACGACATGCGTTTGAT
CAACGCTTTGGCGGATGGACTGGCGTCCAAGGGATGGCTTACCGCTGGCT
TTCCATTGTCTTGTGATCCAGCTATGGCACAGTACGTTTAAGCCGGTGAT
TCGCTTGGCTGGTTGGTAAGGCCTCCCATTGCACGGTAGCTACGCCATCG
TAACGAGGGACGCTGTACAAGCCGAGGGCGAGCAATGAGCAAAGCCCCAT
GCTAG back to topCoding sequence (CDS) from alignment at CM002466.1:804840..806044+ >rna5772 ID=rna5772|Name=rna5772|organism=Nannochloropsis gaditana|type=CDS|length=3072bp|location=Sequence derived from alignment at CM002466.1:804840..806044+ (Nannochloropsis gaditana)
ATGACAGGCCTATTTCGCCATTTCTCAGTATGCCTGTATTTAGCTGTGCT
TTGCCACTCGGTTAGCACTGCATTTGCCTTCGCACCTCTATGCAAGTCTC
CTCTTAGCGCTACCATGGGCGGCACTGTTCGCAAAGGCACCATTCAGACG
ACACGCATGATGGCAGAACGATTCTACAACAAATGGAGTCGGGCGGATTT
TGTGCTGAAAAGCGCGCTAGCCGCGGCGGGAATTATCCCAGTCGTCAAAG
GAGGAGCGGTGGCAAGCAAAATCAAGGCGGAACACAGTGCCCCTGTCAAG
ACTAACAAAAAGCATTCGGATGagaaggatgacgaggagaagTCGACACC
TCTCGCCTTTTCAACAGGTGTACCCCTCCGTTATCCCTTGCACAAAAGCC
AGTACGAGGCTCGCCGTGAGCTGCAAGATGTTGTAGCCCGGGTCGGAGGA
CGCTTGACGGATTTTCGCGGCACCAAAGCTGGTCTTTTTCGTGCTACCTT
TGAccttcatcgcctccaagAGTTACACTTTGAATttggtggtgatggag
ggAGTAGCGGGTACAGCCGTGTGTTGCAAGCACATGTAGGAGCGGGCGTT
GACGACATGCGTTTGATCAACGCTTTGGCGGATGGACTGGCGTCCAAGGG
ATGGCTTACCGCTGGCTTTCCATTGTCTTGTGATCCAGCTATGGCACAGT
ACCTACGCCATCGTAACGAGGGACGCTGTACAAGCCGAGGGCGAGCAATG
AGCAAAGCCCCATGCTAGATGACAGGCCTATTTCGCCATTTCTCAGTATG
CCTGTATTTAGCTGTGCTTTGCCACTCGGTTAGCACTGCATTTGCCTTCG
CACCTCTATGCAAGTCTCCTCTTAGCGCTACCATGGGCGGCACTGTTCGC
AAAGGCACCATTCAGACGACACGCATGATGGCAGAACGATTCTACAACAA
ATGGAGTCGGGCGGATTTTGTGCTGAAAAGCGCGCTAGCCGCGGCGGGAA
TTATCCCAGTCGTCAAAGGAGGAGCGGTGGCAAGCAAAATCAAGGCGGAA
CACAGTGCCCCTGTCAAGACTAACAAAAAGCATTCGGATGagaaggatga
cgaggagaagTCGACACCTCTCGCCTTTTCAACAGGTGTACCCCTCCGTT
ATCCCTTGCACAAAAGCCAGTACGAGGCTCGCCGTGAGCTGCAAGATGTT
GTAGCCCGGGTCGGAGGACGCTTGACGGATTTTCGCGGCACCAAAGCTGG
TCTTTTTCGTGCTACCTTTGAccttcatcgcctccaagAGTTACACTTTG
AATttggtggtgatggagggAGTAGCGGGTACAGCCGTGTGTTGCAAGCA
CATGTAGGAGCGGGCGTTGACGACATGCGTTTGATCAACGCTTTGGCGGA
TGGACTGGCGTCCAAGGGATGGCTTACCGCTGGCTTTCCATTGTCTTGTG
ATCCAGCTATGGCACAGTACCTACGCCATCGTAACGAGGGACGCTGTACA
AGCCGAGGGCGAGCAATGAGCAAAGCCCCATGCTAGATGACAGGCCTATT
TCGCCATTTCTCAGTATGCCTGTATTTAGCTGTGCTTTGCCACTCGGTTA
GCACTGCATTTGCCTTCGCACCTCTATGCAAGTCTCCTCTTAGCGCTACC
ATGGGCGGCACTGTTCGCAAAGGCACCATTCAGACGACACGCATGATGGC
AGAACGATTCTACAACAAATGGAGTCGGGCGGATTTTGTGCTGAAAAGCG
CGCTAGCCGCGGCGGGAATTATCCCAGTCGTCAAAGGAGGAGCGGTGGCA
AGCAAAATCAAGGCGGAACACAGTGCCCCTGTCAAGACTAACAAAAAGCA
TTCGGATGagaaggatgacgaggagaagTCGACACCTCTCGCCTTTTCAA
CAGGTGTACCCCTCCGTTATCCCTTGCACAAAAGCCAGTACGAGGCTCGC
CGTGAGCTGCAAGATGTTGTAGCCCGGGTCGGAGGACGCTTGACGGATTT
TCGCGGCACCAAAGCTGGTCTTTTTCGTGCTACCTTTGAccttcatcgcc
tccaagAGTTACACTTTGAATttggtggtgatggagggAGTAGCGGGTAC
AGCCGTGTGTTGCAAGCACATGTAGGAGCGGGCGTTGACGACATGCGTTT
GATCAACGCTTTGGCGGATGGACTGGCGTCCAAGGGATGGCTTACCGCTG
GCTTTCCATTGTCTTGTGATCCAGCTATGGCACAGTACCTACGCCATCGT
AACGAGGGACGCTGTACAAGCCGAGGGCGAGCAATGAGCAAAGCCCCATG
CTAGATGACAGGCCTATTTCGCCATTTCTCAGTATGCCTGTATTTAGCTG
TGCTTTGCCACTCGGTTAGCACTGCATTTGCCTTCGCACCTCTATGCAAG
TCTCCTCTTAGCGCTACCATGGGCGGCACTGTTCGCAAAGGCACCATTCA
GACGACACGCATGATGGCAGAACGATTCTACAACAAATGGAGTCGGGCGG
ATTTTGTGCTGAAAAGCGCGCTAGCCGCGGCGGGAATTATCCCAGTCGTC
AAAGGAGGAGCGGTGGCAAGCAAAATCAAGGCGGAACACAGTGCCCCTGT
CAAGACTAACAAAAAGCATTCGGATGagaaggatgacgaggagaagTCGA
CACCTCTCGCCTTTTCAACAGGTGTACCCCTCCGTTATCCCTTGCACAAA
AGCCAGTACGAGGCTCGCCGTGAGCTGCAAGATGTTGTAGCCCGGGTCGG
AGGACGCTTGACGGATTTTCGCGGCACCAAAGCTGGTCTTTTTCGTGCTA
CCTTTGAccttcatcgcctccaagAGTTACACTTTGAATttggtggtgat
ggagggAGTAGCGGGTACAGCCGTGTGTTGCAAGCACATGTAGGAGCGGG
CGTTGACGACATGCGTTTGATCAACGCTTTGGCGGATGGACTGGCGTCCA
AGGGATGGCTTACCGCTGGCTTTCCATTGTCTTGTGATCCAGCTATGGCA
CAGTACCTACGCCATCGTAACGAGGGACGCTGTACAAGCCGAGGGCGAGC
AATGAGCAAAGCCCCATGCTAG back to top
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