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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100092g8.2145.mrna |
| Orig protein id | gnl|cribi|Naga_100092g8.2145 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:790431..794190 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5769 ID=rna5769|Name=rna5769|organism=Nannochloropsis gaditana|type=mRNA|length=1653bp
GCACACGGGGTTGGAACGCCGGTTCACGTTTTCTTTTTAAGTTTTCCTGG
AATGTGCTGGCATTCAAATGTTGATGTGCTGGTACTGTTGTTGCAGGTTT
GTTTCCTCTATAACTTTTGGTCGCAGTAGGCTTACTACTACCTCCCCCCC
AAAGGAAAGACTCCGGGACAATATTTGCTGGGTACATCTGTCCACCACGA
TGACTAGCCACAAGAACACGGTGGCTTTGGCAGCTCTAAGCGCAGATGAT
GATGAGGAAGCAGAGGAAGACGAAGAATTGCCGGAAATATATTACAAAGC
TGCTAGATCTTCTACACCTGACATCCAGCCAGTTTTGACCGCTTCCAGCG
TACCAAGAAAAGATGCTATCCCGGCGCCCCCATCTCTCCCTACGGATGTT
CCCACTCTTCAAAAAGCCCTCCTTTCCGCTGAGGGTAGGCTCGTCGGATT
TCAAAATCGTGAACAAGTGTACGTTCATCAGCTTCAGGAAAAAGACGCGG
AAATTTTGGAGTTGCACCGCCATATTCAAGAATTAAGGGTCTTCCAAAGT
CCACCTGAGGCGTGGGGAAGGAAAGTGCTGGTCGACCCTGGCGTAGCTAT
GGAGTTGCGCTTATTACGCGAAAAGATCGCAGAATTGGAAGCGTCCGAAA
AATTTTTGAAAGAGGATGCTCAGGCACGGCACTTTTCTGCTGAAAGCGCC
ACCGGAGAAGCGCTCTTGAACAAATGTCGCCGACTGCAGCAAGAAAATGA
GTCTTTGGCCAGACGGCTGGGAGAGATGGAGAAAGGGACAGGGGAGGACG
GACTTGAAGGGGCGTTTAGAAAACAAATTGCGATTTTGCAGGAACAGCTA
GAGGAAAGTAAGGCAAGAGCGGAGGATTTAGACGAAGAAAGAGGGTTGTT
GAGTACCATGGTGTATGCGCTCAAAAAGCAGCTAGCTGCGGCTGGGGTAG
ACGACGGTGAGGGAAGCACAGGCATGGCAGTGGAGACTGAATGACTTGTC
TCAACTCCTTTTGTAAATGAAGAAATTCATGAGAAAGGAAATCTGCCATG
GACGCCACGAGAAGAAAATTGCGAAGGGAGGGGGCCTCTTCTGCGTCCTT
TTGGTTCTTAGACCCACCTATCAAAGATATCTTGCGGCTTGACATGTCAT
ACGTTAAAGTCTTAGTTTCGATGTTTGGTACAGCGGTATCACGCGACAGG
CAGTAAATTACAATATTGAAAGCTAACCTGAAGCGGCATAGACAATGCAA
GATGGGCCCCTGGGAACACTCGCGAAGCAAGCCGTTTCCACGGTTATCAG
CCGTTTGTGAAAGCCGGATTCTCTCTGTCGCACCCTGCTCCCCGGCGTTT
TAAAAACAATGCTATCATTTTCCTGAAAGTGTATGAGGTGTTTGAGGTGA
TTTTTGGATACCAGAAAAGAAACGCACTTATCACTATTTCCCTCCCTAGC
ATTTCGAAAGGGTGAGGGCTTGAAGGCTGGTCTCATTTCGGAAGCATATA
AGTACTGTTATCCGAGCATTACGATATTTTAATCGACAATGAGAGGAGGA
AAGGGGATACACTATCCAAATTCTTTCCAATAGAGCTTATTTGTCGAATA
AGAAAATGAACGAATTGGTCCCCTACAAGTTTTTCATCCCTTTTTCGCAT
TTC back to topprotein sequence of rna5769 >rna5769-protein ID=rna5769-protein|Name=rna5769|organism=Nannochloropsis gaditana|type=polypeptide|length=1073bp
MDHASFRPALGGAPRRRASMAPSASSLTLLSSASGNFTPVPTTTAIKSIL
KPSQVQPRRDSLAVPSRLTVHQNVHVTAGAQAPKAEPRLPFHRSSRKQHR
RPEPQPSSTDQENLTSAPLSKHAASMGVHAAKPHLSTGNVAVPTHASLKT
PSHKKATAKLGGTAGKVSCATPQRLQQDASTMWTRLRQALARAEGESERL
TKMAIQEPSKQGGSQRGNARPSAEVLDMCRRLVAATDDAVKTLHLLFPGA
SFEDRREGREGNEGGEAEKALPQSDATDVGAGRHPSIVEEEEGEEEAMED
GSLEESLEEGEIRESPGHSGGASKGNLAAASETESGAGTSTAEGLTEQDD
ATERSALQRLVEEVGEQLKQEEEKEERGTGAIVSPDRGGRAGDGIEDETV
RKEEAGEAAGEDDGMGKEKVRMVVEEGEASEPGARRPGGRDLESPPSMAD
LGLSQFTRRFIETAKEGTWGEGKGRESARKESSREADASSQELSPSSPTL
PLERGAAAAATGPKTPVIVMPTAQGVREFPSPVFRTGVKLRHPTGSTPGT
RPRPNHLGASSHSSSTSSSCRSPNLFEPQSLNKQGLRRSLHAPASLPPSA
RPSHPPSTRHDDDTELQHHSFVSSSTATPAMQSPSLLQRHASLAGRQCLG
QPLSLSSQASGPPRGPSVRPSTSSWAARSNDPTPELTSPAKTPFRVLPSG
LDQGAGEDEERDGTPSTARCIRLLQFPPLSAGSKDKVEGTGSGGMKRGKR
LSRTPAGAAAVEAGTRDREDREGMMMGEDESFSYNYPDLTRQSASFVFSP
NRMVGLGLEAEGGGAGAEGETGPRYYLRSAEKKARELAVVRAEEEEAARQ
AASVRALAAARRSPRLASLDKHGARVSDSAGQSANEGEGKQEIMTRAPSA
KPFASSPAVPAASPMPASSTTHTRKSPRIARSTLEREVTAAYQATAKVGS
GKRQSLFAADVEAEVEAGPDKAGPQPCRPIPEVPEEEFARAPSFIQIQVT
REMLNDAIKVFNSHMKGKQHGGKSGVQALPLDQVTEIIAQGDLSKTILLS
LAHLKRVGMSMTTQGQRAYKIWM back to topmRNA from alignment at CM002466.1:790431..794190+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5769 ID=rna5769|Name=rna5769|organism=Nannochloropsis gaditana|type=mRNA|length=3760bp|location=Sequence derived from alignment at CM002466.1:790431..794190+ (Nannochloropsis gaditana)
AACCCCTATACACCCCGATTCCACAAATTATGCTCTGACACTTCTTTTTT
CACACGTTTTGATAGATAACTGCTTTATCTACCCACTGGCATGGACCACG
CAAGTTTTCGTCCCGCTCTTGGTGGCGCTCCCCGCCGGCGAGCATCCATG
GCACCAAGcgcgtcctccttgacgTTATTGTCCAGTGCTAGCGGCAACTT
CACTCCTGTCCCAACCACCACTGCAATAAAAAGCATTCTCAAGCCGTCTC
AAGTCCAGCCTCGTCGCGATTCTTTGGCCGTTCCGTCGCGGTTGACTGTC
CACCAGAATGTTCACGTCACGGCAGGGGCACAGGCTCCCAAAGCcgagcc
ccgcctccccttccatcgttCCTCCCGCAAACAACATCGCCGACCGGAGC
CTCAGCCATCATCTACAGACCAAGAAAATCTGACTAGTGCTCCCCTTTCC
AAACATGCGGCGTCCATGGGCGTCCACGCTGCCAAACCGCACCTCTCGAC
CGGGAACGTGGCAGTTCCCACCCACGCGTCTCTGAAGACGCCTTCCCACA
AGAAGGCCACTGCCAAGCTGGGAGGCACCGCTGGCAAGGTCTCTTGCGCG
ACGCCGCAGCGGTTGCAGCAGGATGCGAGTACGATGTGGACCCGTTTGCG
TCAAGCCTTGGCTCgggcagaaggagaaagcgagcGCTTGACCAAGATGG
CAATCCAGGAGCCTTccaagcagggagggagccagcGTGGGAATGCACGG
CCGTCGGCGGAAGTTCTGGATATGTGCCGACGACTGGTGGCAGCCACCGA
CGATGCAGTGAAAACTCTTCACCTACTCTTTCCTGGAGCGAGTTTTGAGG
Accggagagaggggcgagaagggaatgaaggaggggaggcggagaaagcg
ttGCCTCAAAGCGATGCGACAGATGTGGGAGCGGGGCGGCATCCTTCCAt
cgtcgaagaagaagaaggtgaggaggaagcaatgGAGGATGGGAGTTTGG
AGGAGagtttggaggagggggagatacGCGAGAGTCCGGGGCACTCGGGG
GGTGCGTCGAAGGGGAATCTGGCGGCTGCCTCTGAGACAGAGAGCGGCGC
AGGGACGTCAACAGCGGAGGGACTGACGGAGCAAGATGATGCGACTGAAA
GGAGTGCGCTGCAAAggctcgtggaggaggtaggggagcaattgaagcaa
gaggaagagaaggaagaaagggggacgggggcgatCGTCTCGCCGGACcg
agggggccgggcgggtGACGGGATCGAGGACGAGACagtcaggaaggagg
aagcgggcgaggccgcaggggaggacgacgggatggggaaggagaaggtg
agaatggtggtggaggagggagaggcgtcAGAGCCTGGGGCGCgcaggcc
gggagggagggacctggAGAGTCCGCCCAGCATGGCGGACCTTGGCTTGT
CGCAGTTCACCCGCCGTTTCATCGAGacagccaaggaggggacctgggga
gaagggaaaggaagggagagcgccaggaaggagagcagccGGGAAGCAGA
CGCCTCCTCTCAGGAActcagcccttcctcccccaccttgcccctggaga
gaggggcggcagcggcggccacGGGACCCAAGACGCCCGTCATCGTCATG
CCCACCGCCCAAGGCGTGCGTgagtttccttcccccgtcttccGCACGGG
AGTCAAGCTCAGGCACCCTACAGGGTCCACACCCGGgacccgtcctcgcc
caaaCCACCtaggcgcttcctcccactcctcctccacttcctcctcctgc
cgctcTCCCAACCTCTTCGAACCTCAGAGCTTGAACAAGCAGGGGTTGCG
ACGCTCCTTGcatgcccccgcctccctcccgccctccgcccgtccctccc
accctccttcgacccGCCACGACGATGACACCGAGCTACAGCATCattcc
ttcgtctcctcctccaccgccaccccgGCCATGCagagcccctccctcct
ccaacgtcaCGCATCCCTCGCCGGGCGCCAATGCCTTGGCcaaccccttt
ccctctcctctcaaGCGTCTGgtcctccccgaggcccctccgtccgtccc
tccacctcctcgtggGCGGCGCGCTCCAACGACCCCACCCCAGAGCTCAC
CTCCCCGGCCAAGACTCCTTTCCGCGTGCTGCCTTCGGGGCTGGACCAgg
gcgcaggagaagacgaggagagggatggaacgccctccaccgcccggtGT
ATCCGTCTGTTGCAGTTTCCCCCCCTGAGCGCGGGGAGCAAAGACAAAGT
GGAGGGAACGGGGTCCGGTGGCATGAAACGAGGCAAGCGTTTGAGTCGGA
CGCCGGCGGGTGCTGCTGCGGTAGAGGCCGGAacaagggacagggaggac
agagaggggatgatgatgggggaggacgagtcTTTCTCGTACAACTACCC
GGATTTAACGCGGCAGTCCGCCAGCTTCGTCTTCTCGCCGAACCGCATGG
TGGGGCTGGggttggaggcggaagggggcggggcgggggcggagggagag
acgggccCCCGTTATTATCTGCGGAGTGCGGAAAAGAAGGCTCGGGAGCT
GGCAGTGGTccgggcagaggaagaagaagcagcgcGACAGGCGGCCTCAG
TGCGTGCGTTAGCAGCGGCACGCCGAAGCCCTCGACTCGCCTCCTTGGAC
AAGCATGGCGCTAGAGTATCAGATAGTGCGGGGCAGTCGGCGAacgaagg
cgaaggaaagcaggaAATAATGACCCGTGCGCCGTCTGCGAAGCCTTTCG
CATCATCGCCTGCCGTGCCAGCAGCTTCTCCCATGCCAGCCAGCTCCACA
ACGCATACCCGCAAATCCCCTCGGATTGCCCGCTCCACATTGGAACGGGA
AGTGACCGCTGCCTATCAGGCCACGGCCAAGGTGGGAtcggggaagaggc
aaagTCTCTTTGCGGCCGATGTCgaggccgaggtggaggcaggacCTGAC
AAGGCGGGGCCACAGCCGTGCCGGCCCATTCCGGAAGTCCCTGAGGAGGA
ATTTGCCCGGGCGCCCAGCTTCATCCAGATCCAGGTTACTAGGGAAATGC
TGAACGATGCCATCAAGGTCTTTAATTCCCACATGAAGGGGAAGCAACAT
GGAGGCAAATCAGGGGTACAAGCCCTGCCCCTCGATCAAGTCACCGAAAT
TATAGCCCAAGGTGATCTCTCCAAGACCATCTTGCTTTCTCTCGCCCATT
TGAAACGGGTAGGAATGAGTATGACAACGCAGGGACAAAGGGCGTACAAG
ATATGGATGTGAGGGAACAGTGTAGCGGAGGGGTGCGTCAAGACACGAAC
TGTTTGATAATGGACGGACCAGAAGGTAAATTGTTTGAGGACTGACACTG
GTCTGTGTCCTACCCGGACAACCCATCTGAAGTGTAGAAAGGACGCCGAC
CTCTTCACATCAGCGAATTTTAAACGAGAGCATGATGTCTTGGCATGTCA
GATCTTGATACGCTGGAATATAATAAGAGGACAAGTTGCGTATGGTACCT
GTTAATAAATTCGCATTTTGGGGGATGCTAGTGGAGCAGTAGGAGGAAGC
GCAATGCAGGGTATCATAAAAATGTTGCATCATGGCAAATTAAGATCATT
GCGTGTTTTGTGACTTAGAAAACCATGTCGCCCGATAATgaaaagcagga
ggggaaTAAAACGACGTCAAGTGAAAAGCCAATTCTTGGATACTCATGAA
ATCGCATTGA back to topCoding sequence (CDS) from alignment at CM002466.1:790431..794190+ >rna5769 ID=rna5769|Name=rna5769|organism=Nannochloropsis gaditana|type=CDS|length=3222bp|location=Sequence derived from alignment at CM002466.1:790431..794190+ (Nannochloropsis gaditana)
ATGGACCACGCAAGTTTTCGTCCCGCTCTTGGTGGCGCTCCCCGCCGGCG
AGCATCCATGGCACCAAGcgcgtcctccttgacgTTATTGTCCAGTGCTA
GCGGCAACTTCACTCCTGTCCCAACCACCACTGCAATAAAAAGCATTCTC
AAGCCGTCTCAAGTCCAGCCTCGTCGCGATTCTTTGGCCGTTCCGTCGCG
GTTGACTGTCCACCAGAATGTTCACGTCACGGCAGGGGCACAGGCTCCCA
AAGCcgagccccgcctccccttccatcgttCCTCCCGCAAACAACATCGC
CGACCGGAGCCTCAGCCATCATCTACAGACCAAGAAAATCTGACTAGTGC
TCCCCTTTCCAAACATGCGGCGTCCATGGGCGTCCACGCTGCCAAACCGC
ACCTCTCGACCGGGAACGTGGCAGTTCCCACCCACGCGTCTCTGAAGACG
CCTTCCCACAAGAAGGCCACTGCCAAGCTGGGAGGCACCGCTGGCAAGGT
CTCTTGCGCGACGCCGCAGCGGTTGCAGCAGGATGCGAGTACGATGTGGA
CCCGTTTGCGTCAAGCCTTGGCTCgggcagaaggagaaagcgagcGCTTG
ACCAAGATGGCAATCCAGGAGCCTTccaagcagggagggagccagcGTGG
GAATGCACGGCCGTCGGCGGAAGTTCTGGATATGTGCCGACGACTGGTGG
CAGCCACCGACGATGCAGTGAAAACTCTTCACCTACTCTTTCCTGGAGCG
AGTTTTGAGGAccggagagaggggcgagaagggaatgaaggaggggaggc
ggagaaagcgttGCCTCAAAGCGATGCGACAGATGTGGGAGCGGGGCGGC
ATCCTTCCAtcgtcgaagaagaagaaggtgaggaggaagcaatgGAGGAT
GGGAGTTTGGAGGAGagtttggaggagggggagatacGCGAGAGTCCGGG
GCACTCGGGGGGTGCGTCGAAGGGGAATCTGGCGGCTGCCTCTGAGACAG
AGAGCGGCGCAGGGACGTCAACAGCGGAGGGACTGACGGAGCAAGATGAT
GCGACTGAAAGGAGTGCGCTGCAAAggctcgtggaggaggtaggggagca
attgaagcaagaggaagagaaggaagaaagggggacgggggcgatCGTCT
CGCCGGACcgagggggccgggcgggtGACGGGATCGAGGACGAGACagtc
aggaaggaggaagcgggcgaggccgcaggggaggacgacgggatggggaa
ggagaaggtgagaatggtggtggaggagggagaggcgtcAGAGCCTGGGG
CGCgcaggccgggagggagggacctggAGAGTCCGCCCAGCATGGCGGAC
CTTGGCTTGTCGCAGTTCACCCGCCGTTTCATCGAGacagccaaggaggg
gacctggggagaagggaaaggaagggagagcgccaggaaggagagcagcc
GGGAAGCAGACGCCTCCTCTCAGGAActcagcccttcctcccccaccttg
cccctggagagaggggcggcagcggcggccacGGGACCCAAGACGCCCGT
CATCGTCATGCCCACCGCCCAAGGCGTGCGTgagtttccttcccccgtct
tccGCACGGGAGTCAAGCTCAGGCACCCTACAGGGTCCACACCCGGgacc
cgtcctcgcccaaaCCACCtaggcgcttcctcccactcctcctccacttc
ctcctcctgccgctcTCCCAACCTCTTCGAACCTCAGAGCTTGAACAAGC
AGGGGTTGCGACGCTCCTTGcatgcccccgcctccctcccgccctccgcc
cgtccctcccaccctccttcgacccGCCACGACGATGACACCGAGCTACA
GCATCattccttcgtctcctcctccaccgccaccccgGCCATGCagagcc
cctccctcctccaacgtcaCGCATCCCTCGCCGGGCGCCAATGCCTTGGC
caacccctttccctctcctctcaaGCGTCTGgtcctccccgaggcccctc
cgtccgtccctccacctcctcgtggGCGGCGCGCTCCAACGACCCCACCC
CAGAGCTCACCTCCCCGGCCAAGACTCCTTTCCGCGTGCTGCCTTCGGGG
CTGGACCAgggcgcaggagaagacgaggagagggatggaacgccctccac
cgcccggtGTATCCGTCTGTTGCAGTTTCCCCCCCTGAGCGCGGGGAGCA
AAGACAAAGTGGAGGGAACGGGGTCCGGTGGCATGAAACGAGGCAAGCGT
TTGAGTCGGACGCCGGCGGGTGCTGCTGCGGTAGAGGCCGGAacaaggga
cagggaggacagagaggggatgatgatgggggaggacgagtcTTTCTCGT
ACAACTACCCGGATTTAACGCGGCAGTCCGCCAGCTTCGTCTTCTCGCCG
AACCGCATGGTGGGGCTGGggttggaggcggaagggggcggggcgggggc
ggagggagagacgggccCCCGTTATTATCTGCGGAGTGCGGAAAAGAAGG
CTCGGGAGCTGGCAGTGGTccgggcagaggaagaagaagcagcgcGACAG
GCGGCCTCAGTGCGTGCGTTAGCAGCGGCACGCCGAAGCCCTCGACTCGC
CTCCTTGGACAAGCATGGCGCTAGAGTATCAGATAGTGCGGGGCAGTCGG
CGAacgaaggcgaaggaaagcaggaAATAATGACCCGTGCGCCGTCTGCG
AAGCCTTTCGCATCATCGCCTGCCGTGCCAGCAGCTTCTCCCATGCCAGC
CAGCTCCACAACGCATACCCGCAAATCCCCTCGGATTGCCCGCTCCACAT
TGGAACGGGAAGTGACCGCTGCCTATCAGGCCACGGCCAAGGTGGGAtcg
gggaagaggcaaagTCTCTTTGCGGCCGATGTCgaggccgaggtggaggc
aggacCTGACAAGGCGGGGCCACAGCCGTGCCGGCCCATTCCGGAAGTCC
CTGAGGAGGAATTTGCCCGGGCGCCCAGCTTCATCCAGATCCAGGTTACT
AGGGAAATGCTGAACGATGCCATCAAGGTCTTTAATTCCCACATGAAGGG
GAAGCAACATGGAGGCAAATCAGGGGTACAAGCCCTGCCCCTCGATCAAG
TCACCGAAATTATAGCCCAAGGTGATCTCTCCAAGACCATCTTGCTTTCT
CTCGCCCATTTGAAACGGGTAGGAATGAGTATGACAACGCAGGGACAAAG
GGCGTACAAGATATGGATGTGA back to top
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