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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100148g15.7152.mrna |
| Orig protein id | gnl|cribi|Naga_100148g15.7152 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:714182..715044 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5736 ID=rna5736|Name=rna5736|organism=Nannochloropsis gaditana|type=mRNA|length=2369bp
CGAATTGCCCTTGCATGTCTAGGACCCAGCAAGCGTTTGAACATGCCCTT
TGTGATTAAAACACAAGCTTGAGGAGACGAGGTGAAACAACCAGCTGCGC
TATGACCGACAAGCAGATTTCTTGACCATCGCAATGATTTTTCTGTTTCC
ATGTCCTAGAACTCTCGAAGTAACCTCCCACCCTACACGGTGCTTTCTCG
ACGGCAGAGCTTCAACCATGCCGACTCCTTCCTACAAACTACGCGCTCCC
CCTGACACGCAATGACCTCTTTCGATCTTTGCTCACTTTCACATGCAGGA
TCGCTTTAAACGTTACCTAAAGGATCAGCTTTTCTTGCAGGAGTTTCCGA
CTCTGAGATGAGGCCATTCCTTCCCTTCCTCTTGATCCTAGGGGCTACAT
CAACACCTCTGCCTCCCCTATACTCTATTGCGTTCCAGATTCCTTCACCC
TCCCGGCCCCCATACACTCTGATCAAAGTGGTACTTGATCAGCATCATCC
AGGGCATGGTCATGGACGAACGGCCTTCCTCCGTCACAGTGCTTTGCAAG
CATCCACTGGAACTCCAAGTAGCAGTCCTCCTAGCAAAGTCGATCTGGAG
ACCTGGATGGAAGAGTGGAAAGATAAGCGGCAGCAAGATGGAGGAGGGCT
AGCCAAAGCCACAATCTTTCAACATACCTCGTTGGCGGAGGTTTTGGCGG
AAGTTTACGACCAAGTCCTGAAGGCTGAAAAAGCAGAGAAAGGTGCACCA
CCACCCGAACATCTTTTATTGTTTCCGCAAGCTGAACGATTGTACGATGG
ACAAATGATGCGGCAATTTGGAGACCATTTAGACCTGTGCAAAGAATGCT
GTGAAGTGATGGGCGTCTCCCAGAACACGATCGCCATGCACCCGTCTACC
ACCAGCCCGGCCTTGCAGACTCCAGTCCCGGCGCTCTTGATCAAAGGTAT
CGCGAACGCGGAGGACGAATTCGAGGACGATCCGTTTTGGGATGATGACG
ATGAAGGGTTCGACTTTTCTGCGCTTTACGCAAACGAAGACGGGGAAACG
GACGCCCGGGAGCAGGAAAAACTGTACGAGGTCCCCGAGGGGGACGGACC
AGTCATGGCGGGAATGAGAGAATGGGTGGACGCTGTCATTGCCGATTTGG
GTGTGTGCCCCTTCACAGTCAATGCTGGCAAGGCGGGCTTACCTCAGGGC
GCGATTCGTTATGAGATCAACCGTAGCATGTCGCCGGAAGAGATCTATCG
CAAATACTGGCAGGAAGTCGCCCTGATTTCCACAGACAGCGCCCAGGCAC
AAGACGAACGGAGCCTCAGCACCACCCTCTTGATAACCCCTAATTTCGGC
CTGCGGAACCGGGAATTTTTCGAGACGTTCAGCAACACGCTCACCCAGCC
TTTGGAGGCGCTGGGCTTGGAGGACGAGGTCCAGCTCGTCTTCTTTCATC
CCGAGTGGGTCTTCCGCGACGGTGCCGACCGCATGGGCCAGGACGATGCC
GCAAATTTCGCCCGTCGATCCCCGTGGCCGATGATCAACATTCTGCGGAC
CCCACAGGTGAGGAAAGCGCAAAAAGCCATCCCGACGGGGCTCGTGTACC
GGCAAAACGAAGTGACACTGGACAAGATTGGGTCCGGCCGCTTGCGCCGT
TGGCTGGTGACACGGGACTGGGGAGAGGTCAAAGACAACTTTCGTGTCGA
CCGAAAGACGGTGCCAATCCTTTCGACTGCCCAAGATCTTCTGTCGGGGC
TGACGCCTGAGGCCTTGAAGGAGGAAGACGTCGTTCTTGTCCCTTCGCCG
TGTCCGAAGGCGGGCGAGGGGGCGGTAGCGCAGGAGGACGACGTCCTGGA
GGGAGGGCAAGACGTGCGTTTGAACGAGCAGACGGGCGGTGAAGACATAG
GGATGGATCTCGACGAGTTGGAAGATACGGCTTCTGCCTCTGCGGTCGCG
TACTCAGCGGCGGCTGCTTCTGAAGCCGCTGCAGCCAACCGTCAATTTTT
CGGGGGAGGATTTGAGGACGAGTTCGCCGCGTTGAGGGAGGCCGTAAGGA
AGGGGGAGGAGGATGACGACGACTGGGACCAGCCCCTCTCCGAGTCGTTG
GAGCTGTTGGAGAGAGGCCCCCACCGCGCGCGGCGTCCGATGGGAGAGAT
CATCGAGGATTCCAAGGCGGTTCTAGCCATGCTGCGAAAGCGTTTGGGTC
AACGCCTCCCTCTCTCTCCGGCCGAGGTGCATAGCTTTGAAGAGCGAGCC
AAGCGGATGCAAAATGATTGACATGTGGGGTTGGCTCGTTGACAGCAAGC
ATAAGTCGAAAAGATAATATTATTTGTCTACTAAAAACCTTTAAACAAAC
TGCAAAAAGAAACGTTTCG back to topprotein sequence of rna5736 >rna5736-protein ID=rna5736-protein|Name=rna5736|organism=Nannochloropsis gaditana|type=polypeptide|length=196bp
MKDHVLFFEDSLRFEVCFLRSCFLPPRRRLFPFALYTCLLRKEKSSLPLS
SGRPYDRPCVFASYCVCLGISLGIDEVDHTLSTCDVTASASARSSSKSLP
CLDFFTCLPVSCTPPPPFLLFACSVIIITVVHRCGSESVPHTCSVIGDET
RETTRRKDRRKAGGFFSAGSRCRVFSSTCAGAAPHKLRRQSRPDEV back to topmRNA from alignment at CM002466.1:714182..715044- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5736 ID=rna5736|Name=rna5736|organism=Nannochloropsis gaditana|type=mRNA|length=863bp|location=Sequence derived from alignment at CM002466.1:714182..715044- (Nannochloropsis gaditana)
ATGAAGGATCATGTCCTATTTTTTGAAGATTCCCTGAGGTTTGAAGTCTG
TTTTTTACGAAGCTGTTGAGAATGGTTTTGTAACCAGTGAGAGCGTGCCC
CCTCCATCTCCCTCGAGCTTTCCACCTGCCCCTTCGTCAGCGCCCCTTTG
TGAGGCTTTTTGCCTCCCCGACGCCGTCTGTTTCCTTTCGCTTTGTACAC
TTGCCTGCTACGCAAAGAGAAGTCGTCGCTTCCTCTTTCAAGTGGACGTC
CTTATGATCGGCCCTGTGTGTTCGCATCGTACTGCGTTTGCCTTGGAATT
TCCTTAGGAATAGACGAGGTCGACCATACCCTGTGTCCTTTGCGTCGAAA
GCTTTCGCTTCCTTCTCCTCCTTTTGAGCTACGTGTGATGTGACTGCCTC
CGCCTCTGCTCGCTCCTCTTCGAAATCCCTGCCGTGCCTCGACTTTTTTA
CCTGCTTGCCTGTCTCCTGTACACCTCCGCCCCCCTTCGTCTTCCCCTGT
GCGATCCCTCGCCCCTCCTTGTGTTAAGAGTTACTTTTTGCGTGTAGCGT
GATCATCATTACCGTCGTGCACCGTTGTGGGTCCGAGTCAGTGCCACACA
CCTGCAGTGTCATCGGAGATGAGACACGGGAGACTACCAGACGAAAAGAC
CGACGGAAGGCCGGTGGATTTTTCTCGGCTGGGAGTCGGTGCCGAGTTTT
TTCATCCACTTGTGCCGGGGCTGCCCCCCACAAGCTTCGACGTCAAAGCC
GACCAGACGAGGTGCGTTGTCTGTGCCCTTTCTTTGCATGAACGGAGTGA
TGTTTGTCGCACGGACGCACCCAGTGACAGCAATCATGTTCTCGCCACCC
TACACAGGTGTAA back to topCoding sequence (CDS) from alignment at CM002466.1:714182..715044- >rna5736 ID=rna5736|Name=rna5736|organism=Nannochloropsis gaditana|type=CDS|length=2955bp|location=Sequence derived from alignment at CM002466.1:714182..715044- (Nannochloropsis gaditana)
GTGTAATTACTTTTTGCGTGTAGCGTGATCATCATTACCGTCGTGCACCG
TTGTGGGTCCGAGTCAGTGCCACACACCTGCAGTGTCATCGGAGATGAGA
CACGGGAGACTACCAGACGAAAAGACCGACGGAAGGCCGGTGGATTTTTC
TCGGCTGGGAGTCGGTGCCGAGTTTTTTCATCCACTTGTGCCGGGGCTGC
CCCCCACAAGCTTCGACGTCAAAGCCGACCAGACGAGCTACGTGTGATGT
GACTGCCTCCGCCTCTGCTCGCTCCTCTTCGAAATCCCTGCCGTGCCTCG
ACTTTTTTACCTGCTTGCCTGTCTCCTGTACACCTCCGCCCCCCTTCGCT
TTTTGCCTCCCCGACGCCGTCTGTTTCCTTTCGCTTTGTACACTTGCCTG
CTACGCAAAGAGAAGTCGTCGCTTCCTCTTTCAAGTGGACGTCCTTATGA
TCGGCCCTGTGTGTTCGCATCGTACTGCGTTTGCCTTGGAATTTCCTTAG
GAATAGACGAGGTCGACCATACCCTGTATGAAGGATCATGTCCTATTTTT
TGAAGATTCCCTGAGGTTTGAAGTCTGTTTTTTACGAAGCTGTGTAATTA
CTTTTTGCGTGTAGCGTGATCATCATTACCGTCGTGCACCGTTGTGGGTC
CGAGTCAGTGCCACACACCTGCAGTGTCATCGGAGATGAGACACGGGAGA
CTACCAGACGAAAAGACCGACGGAAGGCCGGTGGATTTTTCTCGGCTGGG
AGTCGGTGCCGAGTTTTTTCATCCACTTGTGCCGGGGCTGCCCCCCACAA
GCTTCGACGTCAAAGCCGACCAGACGAGCTACGTGTGATGTGACTGCCTC
CGCCTCTGCTCGCTCCTCTTCGAAATCCCTGCCGTGCCTCGACTTTTTTA
CCTGCTTGCCTGTCTCCTGTACACCTCCGCCCCCCTTCGCTTTTTGCCTC
CCCGACGCCGTCTGTTTCCTTTCGCTTTGTACACTTGCCTGCTACGCAAA
GAGAAGTCGTCGCTTCCTCTTTCAAGTGGACGTCCTTATGATCGGCCCTG
TGTGTTCGCATCGTACTGCGTTTGCCTTGGAATTTCCTTAGGAATAGACG
AGGTCGACCATACCCTGTATGAAGGATCATGTCCTATTTTTTGAAGATTC
CCTGAGGTTTGAAGTCTGTTTTTTACGAAGCTGTGTAATTACTTTTTGCG
TGTAGCGTGATCATCATTACCGTCGTGCACCGTTGTGGGTCCGAGTCAGT
GCCACACACCTGCAGTGTCATCGGAGATGAGACACGGGAGACTACCAGAC
GAAAAGACCGACGGAAGGCCGGTGGATTTTTCTCGGCTGGGAGTCGGTGC
CGAGTTTTTTCATCCACTTGTGCCGGGGCTGCCCCCCACAAGCTTCGACG
TCAAAGCCGACCAGACGAGCTACGTGTGATGTGACTGCCTCCGCCTCTGC
TCGCTCCTCTTCGAAATCCCTGCCGTGCCTCGACTTTTTTACCTGCTTGC
CTGTCTCCTGTACACCTCCGCCCCCCTTCGCTTTTTGCCTCCCCGACGCC
GTCTGTTTCCTTTCGCTTTGTACACTTGCCTGCTACGCAAAGAGAAGTCG
TCGCTTCCTCTTTCAAGTGGACGTCCTTATGATCGGCCCTGTGTGTTCGC
ATCGTACTGCGTTTGCCTTGGAATTTCCTTAGGAATAGACGAGGTCGACC
ATACCCTGTATGAAGGATCATGTCCTATTTTTTGAAGATTCCCTGAGGTT
TGAAGTCTGTTTTTTACGAAGCTGTGTAATTACTTTTTGCGTGTAGCGTG
ATCATCATTACCGTCGTGCACCGTTGTGGGTCCGAGTCAGTGCCACACAC
CTGCAGTGTCATCGGAGATGAGACACGGGAGACTACCAGACGAAAAGACC
GACGGAAGGCCGGTGGATTTTTCTCGGCTGGGAGTCGGTGCCGAGTTTTT
TCATCCACTTGTGCCGGGGCTGCCCCCCACAAGCTTCGACGTCAAAGCCG
ACCAGACGAGCTACGTGTGATGTGACTGCCTCCGCCTCTGCTCGCTCCTC
TTCGAAATCCCTGCCGTGCCTCGACTTTTTTACCTGCTTGCCTGTCTCCT
GTACACCTCCGCCCCCCTTCGCTTTTTGCCTCCCCGACGCCGTCTGTTTC
CTTTCGCTTTGTACACTTGCCTGCTACGCAAAGAGAAGTCGTCGCTTCCT
CTTTCAAGTGGACGTCCTTATGATCGGCCCTGTGTGTTCGCATCGTACTG
CGTTTGCCTTGGAATTTCCTTAGGAATAGACGAGGTCGACCATACCCTGT
ATGAAGGATCATGTCCTATTTTTTGAAGATTCCCTGAGGTTTGAAGTCTG
TTTTTTACGAAGCTGTGTAATTACTTTTTGCGTGTAGCGTGATCATCATT
ACCGTCGTGCACCGTTGTGGGTCCGAGTCAGTGCCACACACCTGCAGTGT
CATCGGAGATGAGACACGGGAGACTACCAGACGAAAAGACCGACGGAAGG
CCGGTGGATTTTTCTCGGCTGGGAGTCGGTGCCGAGTTTTTTCATCCACT
TGTGCCGGGGCTGCCCCCCACAAGCTTCGACGTCAAAGCCGACCAGACGA
GCTACGTGTGATGTGACTGCCTCCGCCTCTGCTCGCTCCTCTTCGAAATC
CCTGCCGTGCCTCGACTTTTTTACCTGCTTGCCTGTCTCCTGTACACCTC
CGCCCCCCTTCGCTTTTTGCCTCCCCGACGCCGTCTGTTTCCTTTCGCTT
TGTACACTTGCCTGCTACGCAAAGAGAAGTCGTCGCTTCCTCTTTCAAGT
GGACGTCCTTATGATCGGCCCTGTGTGTTCGCATCGTACTGCGTTTGCCT
TGGAATTTCCTTAGGAATAGACGAGGTCGACCATACCCTGTATGAAGGAT
CATGTCCTATTTTTTGAAGATTCCCTGAGGTTTGAAGTCTGTTTTTTACG
AAGCT back to top
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