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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF1415 |
| Orig transcript id | gnl|cribi|Naga_100148g14.7149.mrna |
| Orig protein id | gnl|cribi|Naga_100148g14.7149 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002466.1 | supercontig | CM002466.1:711766..714134 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5735 ID=rna5735|Name=rna5735|organism=Nannochloropsis gaditana|type=mRNA|length=2117bp
GCTGGGCATGACAGTGGATACTGCCAATATTCTGGGCTATTTACGTGTAC
TTTGTCAGAATCTCGTTGTGGACGGTCCCATACATGGTATTTTTTGGCAG
GTCAAATGATTTCGCATGTTGGGGGGCGGGGTCCCCTCTGAGGCGTCCAT
GCTGACTTCCATCTCACTGCCACGATTAACCCATTCCACAGGGTACCCAA
GCACCCCTGCCTTGTGGATGGGTTGCAGAAGGAGGTGAAAGTGCTCCACT
TCCCTAGCGTGCTGTTGTGTCCTTCATTCACATGACAGACGGGGCGATTG
GACCCGCGGCTTCTCCCCCGTGCTGCTCGAGGATTAGCGCGCAAGCCTCT
AAGTCACAACCCGGACGTGCCTTTTTGTGCCGTATCATCACATTGCTGAC
CCTTTGGAAACTTGGCAAGGGGAAAATGGCTTCCTCTGTCCGTTCCAATG
GAGTCGCAGCGCTAAATGCAACTCCTCTCGCAAACGTGCATGTCCAGTGG
CGGAGACGCGCAACAGCAGGACGAGGTCATTTTCGCAATACTTTTGGAGC
CTTCATCAGCACAAATTTAAGGACGCAGTCGACCATACCTATGGGTACGG
CTGCGAAAAAGAGCTCGAAGCTTTCCGGTGGTACCACACCACCTCCACAC
CGTCCGAGAAGTAGCAGCGGTGGCACTCTCACGGGCGACACTGGCCACGT
GAACCCATACCAACCGCACAGCCCTTTCCTGGATCAGCCTCCCGCCTATT
CTCACCTTGTCTTTCCCGGTGGGGACTCCAAGGCTGCCAGCAAAGCCCAT
CAGCACACGAACTCGTACCTCTCCCACGTTCTGCGCCTCCGTCTCCGCAC
CATGGATCCCTCTTCCCTGCCTCCAACCTCCTCCCTTGCCTCGCCACTCC
TCGCAGCCGAGGGAGAAATTGTCATTGAGCAGGGACCTGGCTCCAATGCC
CGAAAGCCACAGCCTGCCTGGTGCACACAAGTGTGGGTCGGCCTGGGGCG
TGGCGAGAGGGAGGCCGTTTACGGTTTAATTGCGCAGGGCGTGGCCGCTG
CACAGGCTCTGGGCCTTAAGAATTTGCAGGTGGCCGCCCCGTCGGCACAA
GTGGCGCGAGAGATTTGTGGAATCGACGCGGTGGCGGAGAGCAAGGGCTC
CAAGGGGAGCCAAGGCGGCGATTGCTCCTTGCTTACGGCCCATCGAAAGA
TCCAATCGATGCTCAAGTTCTTCCCCTTCTTCTCCGTCTCGTATCGTATC
GTGAAAGAGGGGCACGAGGAGGATATGGTGCTCCAACCCGTCCCCAGCCT
GAGAGGCAGCCAAGATGGGGACGAGGAGGAAGCTCACCCTATGCCACCGA
CAACGCTCACTCCTTTTCGCACACCTTCCACTACTGGTTTTGGCAATGGT
GCGGAAGACTCCGCTGTCAATTCCGAGGAAGAGGATGACGAAGAAGGACA
CGCTCGATCAAGGCACGATGCCTCACCGGACTCCCCCGTCCATAGAGCAT
CATGTCCTCCAAGCGCCCCCCTTCCCGCGCGAAGCCACGTTTCGAAGGTC
GGCACTGGCATGCGGTCCATGTCTCCGATAATAAACCCTACTGCTCAGTA
TCTGCTCCGCTTTGACGGCGGCTCCCGGGGAAATCCAGGCCCTGGAGGCG
CGGGTATTGTTATCTACGAGCAGGCCTCTCTTGTGCAGGTGCGGGGCTTG
TCTCTGTGGCTGGGATCTGACCCACCGCTGACAAATAACGAGGCAGAATA
CCATGGATTGGTCGCAGGTCTGAGAGCAGCCAAGACATTGGGTATTCGGA
GGATTTGCGTCGAGGGAGATTCTCAACTGGTGGTACGGCAGATCTTAGGG
GTGTACAAAGTCAGGAACGAACGTCTGAGAGTGTTGTATTCAGAGGCCAT
GGCGTTGAAGGAAAACTTTGCCGAGTTTTCGATCCGGCATGTCGAGCGGT
CGCAGAACTCGGATGCAGATGCGTTAGCCAACAGAGCTTTAGATGAGCAA
TGTAATGGGACGTTTGATTCGGGCGGGTTACGGCTTGATTACTCAAAAGA
GGCTGACCAGGTTAAAGAATGATCATTCTCACAAATCGAAAGGAAGCATC
AGGATTGTCTCTATTTT back to topprotein sequence of rna5735 >rna5735-protein ID=rna5735-protein|Name=rna5735|organism=Nannochloropsis gaditana|type=polypeptide|length=637bp
MRPFLPFLLILGATSTPLPPLYSIAFQIPSPSRPPYTLIKVVLDQHHPGH
GHGRTAFLRHSALQASTGTPSSSPPSKVDLETWMEEWKDKRQQDGGGLAK
ATIFQHTSLAEVLAEVYDQVLKAEKAEKGAPPPEHLLLFPQAERLYDGQM
MRQFGDHLDLCKECCEVMGVSQNTIAMHPSTTSPALQTPVPALLIKGIAN
AEDEFEDDPFWDDDDEGFDFSALYANEDGETDAREQEKLYEVPEGDGPVM
AGMREWVDAVIADLGVCPFTVNAGKAGLPQGAIRYEINRSMSPEEIYRKY
WQEVALISTDSAQAQDERSLSTTLLITPNFGLRNREFFETFSNTLTQPLE
ALGLEDEVQLVFFHPEWVFRDGADRMGQDDAANFARRSPWPMINILRTPQ
VRKAQKAIPTGLVYRQNEVTLDKIGSGRLRRWLVTRDWGEVKDNFRVDRK
TVPILSTAQDLLSGLTPEALKEEDVVLVPSPCPKAGEGAVAQEDDVLEGG
QDVRLNEQTGGEDIGMDLDELEDTASASAVAYSAAAASEAAAANRQFFGG
GFEDEFAALREAVRKGEEDDDDWDQPLSESLELLERGPHRARRPMGEIIE
DSKAVLAMLRKRLGQRLPLSPAEVHSFEERAKRMQND back to topmRNA from alignment at CM002466.1:711766..714134+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5735 ID=rna5735|Name=rna5735|organism=Nannochloropsis gaditana|type=mRNA|length=2369bp|location=Sequence derived from alignment at CM002466.1:711766..714134+ (Nannochloropsis gaditana)
CGAATTGCCCTTGCATGTCTAGGACCCAGCAAGCGTTTGAACATGCCCTT
TGTGATTAAAACACAAGCTTGAGGAGACGAGGTGAAACAACCAGCTGCGC
TATGACCGACAAGCAGATTTCTTGACCATCGCAATGATTTTTCTGTTTCC
ATGTCCTAGAACTCTCGAAGTAACCTCCCACCCTACACGGTGCTTTCTCG
ACGGCAGAGCTTCAACCATGCCGACTCCTTCCTACAAACTACGCGCTCCC
CCTGACACGCAATGACCTCTTTCGATCTTTGCTCACTTTCACATGCAGGA
TCGCTTTAAACGTTACCTAAAGGATCAGCTTTTCTTGCAGGAGTTTCCGA
CTCTGAGATGAggccattccttcccttcctcttgatCCTAGGGGCTACAT
CAAcacctctgcctcccctaTACTCTATTGCGTTCCAGATTCCTTcaccc
tcccggcccccaTACACTCTGATCAAAGTGGTACTTGATCAGCATCATCC
AGGGCATGGTCATGGACGAacggccttcctccgtcacaGTGCTTTGCAAG
CATCCACTGGAACTCCAAGTAGCAGTCCTCCTAGCAAAGTCGATCTGGAG
ACCTGGATGGAAGAGTGGAAAGATAAGCGGCagcaagatggaggagggct
aGCCAAAGCCACAATCTTTCAACATACCTCGTTGGCGGAGGTTTTGGCGG
AAGTTTACGACCAAGTCCTGAAGGCTGAAAAAGCAGAGAAAGGTGCACCA
CCACCCGAACATCTTTTATTGTTTCCGCAAGCTGAACGATTGTACGATGG
ACAAATGATGCGGCAATTTGGAGACCATTTAGACCTGTGCAAAGAATGCT
GTGAAGTGATGGGCGTCTCCCAGAACACGATCGCCATGCACCCGTCTACC
ACCAGCCCGGCCTTGCAGACTCCAGTCCCGGCGCTCTTGATCAAAGGTAT
CGCGAACGCGGAGGACGAATTCGAGGACGATCCGTTTTGGGATGATGACG
ATGAAGGGTTCGACTTTTCTGCGCTTTACGCAAACGAAGACGGGGAAACG
GACGCCCGGGAGCAGGAAAAACTGTACGAGGTCCCCGAGGGGGACGGACC
AGTCATGGCGGGAATGAGAGAATGGGTGGACGCTGTCATTGCCGATTTGG
GTGTGTGCCCCTTCACAGTCAATGCTGGCAAGGCGGGCTTACCTCAGGGC
GCGATTCGTTATGAGATCAACCGTAGCATGTCGCCGGAAGAGATCTATCG
CAAATACTGGCAGGAAGTCGCCCTGATTTCCACAGACAGCGCCCAGGCAC
AAGACGAACGGAGCCTCAGCACCACCCTCTTGATAACCCCTAATTTCGGC
CTGCGGAACCGGGAATTTTTCGAGACGTTCAGCAACACGCTCACCCAGCC
TTTGGAGGcgctgggcttggaggacgaggtccaGCTCGTCTTCTTTCATC
CCGAGTGGGTCTTCCGCGACGGTGCCGACCGCATGGGCCAGGACGATGCC
GCAAATTTCGCCCGTCGATCCCCGTGGCCGATGATCAACATTCTGCGGAC
CCCACAGGTGAGGAAAGCGCAAAAAGCCATCCCGACGGGGCTCGTGTACC
GGCAAAACGAAGTGACACTGGACAAGATTGGGTCCGGCCGCTTGCGCCGT
TGGCTGGTGACACGGGACTGGGGAGAGGTCAAAGACAACTTTCGTGTCGA
CCGAAAGACGGTGCCAATCCTTTCGACTGCCCAAGATCTTCTGTCGGGGC
TGACGCCTgaggccttgaaggaggaagacgtcgtTCTTGTCCCTTCGCCG
TGTCcgaaggcgggcgagggggcggtagcgcaggaggacgacgtcctgga
gggagggcaagacgTGCGTTTGAACGAGCAGACGGGCGGTGAAGACATAG
GGATGGATCTCGACGAGTTGGAAGATACGGCTTCTGCCTCTGCGGTCGCG
TACTCAGCGGCGGCTGCTTCTGAAGCCGCTGCAGCCAACCGTCAATTTTT
CGGGGGAGGATTTGAGGACGAGTTCGCCGCGTTGAGGGAGGCCgtaagga
agggggaggaggatgacgacgacTGGGACCAGCCCCTCTCCGAGTCGTTG
GAGCTGTTGGAGAGAGGCCCCCACCGCGCGCGGCGTCCGATGGGAGAGAT
CATCGAGGATTCCAAGGCGGTTCTAGCCATGCTGCGAAAGCGTTTGGGTc
aacgcctccctctctctccggCCGAGGTGCATAGCTTTGAAGAGCGAGCC
AAGCGGATGCAAAATGATTGACATGTGGGGTTGGCTCGTTGACAGCAAGC
ATAAGTCGAAAAGATAATATTATTTGTCTACTAAAAACCTTTAAACAAAC
TGCAAAAAGAAACGTTTCG back to topCoding sequence (CDS) from alignment at CM002466.1:711766..714134+ >rna5735 ID=rna5735|Name=rna5735|organism=Nannochloropsis gaditana|type=CDS|length=1914bp|location=Sequence derived from alignment at CM002466.1:711766..714134+ (Nannochloropsis gaditana)
ATGAggccattccttcccttcctcttgatCCTAGGGGCTACATCAAcacc
tctgcctcccctaTACTCTATTGCGTTCCAGATTCCTTcaccctcccggc
ccccaTACACTCTGATCAAAGTGGTACTTGATCAGCATCATCCAGGGCAT
GGTCATGGACGAacggccttcctccgtcacaGTGCTTTGCAAGCATCCAC
TGGAACTCCAAGTAGCAGTCCTCCTAGCAAAGTCGATCTGGAGACCTGGA
TGGAAGAGTGGAAAGATAAGCGGCagcaagatggaggagggctaGCCAAA
GCCACAATCTTTCAACATACCTCGTTGGCGGAGGTTTTGGCGGAAGTTTA
CGACCAAGTCCTGAAGGCTGAAAAAGCAGAGAAAGGTGCACCACCACCCG
AACATCTTTTATTGTTTCCGCAAGCTGAACGATTGTACGATGGACAAATG
ATGCGGCAATTTGGAGACCATTTAGACCTGTGCAAAGAATGCTGTGAAGT
GATGGGCGTCTCCCAGAACACGATCGCCATGCACCCGTCTACCACCAGCC
CGGCCTTGCAGACTCCAGTCCCGGCGCTCTTGATCAAAGGTATCGCGAAC
GCGGAGGACGAATTCGAGGACGATCCGTTTTGGGATGATGACGATGAAGG
GTTCGACTTTTCTGCGCTTTACGCAAACGAAGACGGGGAAACGGACGCCC
GGGAGCAGGAAAAACTGTACGAGGTCCCCGAGGGGGACGGACCAGTCATG
GCGGGAATGAGAGAATGGGTGGACGCTGTCATTGCCGATTTGGGTGTGTG
CCCCTTCACAGTCAATGCTGGCAAGGCGGGCTTACCTCAGGGCGCGATTC
GTTATGAGATCAACCGTAGCATGTCGCCGGAAGAGATCTATCGCAAATAC
TGGCAGGAAGTCGCCCTGATTTCCACAGACAGCGCCCAGGCACAAGACGA
ACGGAGCCTCAGCACCACCCTCTTGATAACCCCTAATTTCGGCCTGCGGA
ACCGGGAATTTTTCGAGACGTTCAGCAACACGCTCACCCAGCCTTTGGAG
GcgctgggcttggaggacgaggtccaGCTCGTCTTCTTTCATCCCGAGTG
GGTCTTCCGCGACGGTGCCGACCGCATGGGCCAGGACGATGCCGCAAATT
TCGCCCGTCGATCCCCGTGGCCGATGATCAACATTCTGCGGACCCCACAG
GTGAGGAAAGCGCAAAAAGCCATCCCGACGGGGCTCGTGTACCGGCAAAA
CGAAGTGACACTGGACAAGATTGGGTCCGGCCGCTTGCGCCGTTGGCTGG
TGACACGGGACTGGGGAGAGGTCAAAGACAACTTTCGTGTCGACCGAAAG
ACGGTGCCAATCCTTTCGACTGCCCAAGATCTTCTGTCGGGGCTGACGCC
TgaggccttgaaggaggaagacgtcgtTCTTGTCCCTTCGCCGTGTCcga
aggcgggcgagggggcggtagcgcaggaggacgacgtcctggagggaggg
caagacgTGCGTTTGAACGAGCAGACGGGCGGTGAAGACATAGGGATGGA
TCTCGACGAGTTGGAAGATACGGCTTCTGCCTCTGCGGTCGCGTACTCAG
CGGCGGCTGCTTCTGAAGCCGCTGCAGCCAACCGTCAATTTTTCGGGGGA
GGATTTGAGGACGAGTTCGCCGCGTTGAGGGAGGCCgtaaggaaggggga
ggaggatgacgacgacTGGGACCAGCCCCTCTCCGAGTCGTTGGAGCTGT
TGGAGAGAGGCCCCCACCGCGCGCGGCGTCCGATGGGAGAGATCATCGAG
GATTCCAAGGCGGTTCTAGCCATGCTGCGAAAGCGTTTGGGTcaacgcct
ccctctctctccggCCGAGGTGCATAGCTTTGAAGAGCGAGCCAAGCGGA
TGCAAAATGATTGA back to top
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